| # | Title | Journal | Year | Citations |
|---|
| 1 | Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 | Nature Biotechnology | 2019 | 11,167 |
| 2 | Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) | Autophagy | 2016 | 4,701 |
| 3 | Guidelines for the use and interpretation of assays for monitoring autophagy | Autophagy | 2012 | 3,122 |
| 4 | ALKBH5 Is a Mammalian RNA Demethylase that Impacts RNA Metabolism and Mouse Fertility | Molecular Cell | 2013 | 2,549 |
| 5 | Genome-wide association studies of 14 agronomic traits in rice landraces | Nature Genetics | 2010 | 1,978 |
| 6 | Targeted genome modification of crop plants using a CRISPR-Cas system | Nature Biotechnology | 2013 | 1,657 |
| 7 | Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew | Nature Biotechnology | 2014 | 1,635 |
| 8 | Nuclear m 6 A Reader YTHDC1 Regulates mRNA Splicing | Molecular Cell | 2016 | 1,432 |
| 9 | A map of rice genome variation reveals the origin of cultivated rice | Nature | 2012 | 1,428 |
| 10 | Regulation of OsSPL14 by OsmiR156 defines ideal plant architecture in rice | Nature Genetics | 2010 | 1,240 |
| 11 | Taxonomic structure and functional association of foxtail millet root microbiome | GigaScience | 2017 | 1,228 |
| 12 | Criteria for Annotation of Plant MicroRNAs | Plant Cell | 2008 | 1,158 |
| 13 | Genomic variation in 3,010 diverse accessions of Asian cultivated rice | Nature | 2018 | 1,091 |
| 14 | Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm | Nature Genetics | 2012 | 1,030 |
| 15 | Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean | Nature Biotechnology | 2015 | 1,023 |
| 16 | Control of grain size, shape and quality by OsSPL16 in rice | Nature Genetics | 2012 | 1,004 |
| 17 | Control of tillering in rice | Nature | 2003 | 988 |
| 18 | Plant Immunity Requires Conformational Charges of NPR1 via S-Nitrosylation and Thioredoxins | Science | 2008 | 964 |
| 19 | CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture | Annual Review of Plant Biology | 2019 | 959 |
| 20 | MicroRNA Directs mRNA Cleavage of the Transcription Factor NAC1 to Downregulate Auxin Signals for Arabidopsis Lateral Root Development | Plant Cell | 2005 | 950 |
| 21 | Coordinated regulation of Arabidopsis thaliana development by light and gibberellins | Nature | 2008 | 906 |
| 22 | FTO-dependent demethylation of N6-methyladenosine regulates mRNA splicing and is required for adipogenesis | Cell Research | 2014 | 869 |
| 23 | Natural variation at the DEP1 locus enhances grain yield in rice | Nature Genetics | 2009 | 858 |
| 24 | Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes | Nature Communications | 2017 | 751 |
| 25 | Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA | Nature Communications | 2016 | 710 |
| 26 | Two Faces of One Seed: Hormonal Regulation of Dormancy and Germination | Molecular Plant | 2016 | 709 |
| 27 | Draft genome of the wheat A-genome progenitor Triticum urartu | Nature | 2013 | 700 |
| 28 | Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion | Nature Biotechnology | 2017 | 690 |
| 29 | D14–SCFD3-dependent degradation of D53 regulates strigolactone signalling | Nature | 2013 | 669 |
| 30 | DWARF 53 acts as a repressor of strigolactone signalling in rice | Nature | 2013 | 660 |
| 31 | NRT1.1B is associated with root microbiota composition and nitrogen use in field-grown rice | Nature Biotechnology | 2019 | 641 |
| 32 | Core microbiomes for sustainable agroecosystems | Nature Plants | 2018 | 639 |
| 33 | The FLS2-Associated Kinase BIK1 Directly Phosphorylates the NADPH Oxidase RbohD to Control Plant Immunity | Cell Host and Microbe | 2014 | 635 |
| 34 | AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development | Plant Journal | 2005 | 634 |
| 35 | Zika Virus Disrupts Neural Progenitor Development and Leads to Microcephaly in Mice | Cell Stem Cell | 2016 | 614 |
| 36 | A gate–latch–lock mechanism for hormone signalling by abscisic acid receptors | Nature | 2009 | 608 |
| 37 | Structural Basis for flg22-Induced Activation of the Arabidopsis FLS2-BAK1 Immune Complex | Science | 2013 | 604 |
| 38 | The FERONIA Receptor-like Kinase Mediates Male-Female Interactions During Pollen Tube Reception | Science | 2007 | 596 |
| 39 | Pattern-recognition receptors are required for NLR-mediated plant immunity | Nature | 2021 | 590 |
| 40 | Brassinosteroid Regulates Cell Elongation by Modulating Gibberellin Metabolism in Rice | Plant Cell | 2014 | 589 |
| 41 | Genome-Wide Binding Analysis of the Transcription Activator IDEAL PLANT ARCHITECTURE1 Reveals a Complex Network Regulating Rice Plant Architecture | Plant Cell | 2013 | 588 |
| 42 | Soybean WRKY‐type transcription factor genes,GmWRKY13, GmWRKY21, andGmWRKY54, confer differential tolerance to abiotic stresses in transgenicArabidopsisplants | Plant Biotechnology Journal | 2008 | 582 |
| 43 | Breeding crops to feed 10 billion | Nature Biotechnology | 2019 | 577 |
| 44 | Targeted Mutagenesis in Zea mays Using TALENs and the CRISPR/Cas System | Journal of Genetics and Genomics | 2014 | 567 |
| 45 | Reversed‐phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells | Proteomics | 2011 | 564 |
| 46 | The OsSPL16-GW7 regulatory module determines grain shape and simultaneously improves rice yield and grain quality | Nature Genetics | 2015 | 555 |
| 47 | Receptor Kinases in Plant-Pathogen Interactions: More Than Pattern Recognition | Plant Cell | 2017 | 552 |
| 48 | Reconstitution and structure of a plant NLR resistosome conferring immunity | Science | 2019 | 551 |
| 49 | DWARF27, an Iron-Containing Protein Required for the Biosynthesis of Strigolactones, Regulates Rice Tiller Bud Outgrowth | Plant Cell | 2009 | 549 |
| 50 | Prime genome editing in rice and wheat | Nature Biotechnology | 2020 | 544 |
