| # | Title | Journal | Year | Citations |
|---|
| 1 | PacBio Sequencing and Its Applications | Genomics, Proteomics and Bioinformatics | 2015 | 1,669 |
| 2 | Exosome and Exosomal MicroRNA: Trafficking, Sorting, and Function | Genomics, Proteomics and Bioinformatics | 2015 | 1,466 |
| 3 | KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies | Genomics, Proteomics and Bioinformatics | 2010 | 1,301 |
| 4 | KaKs_Calculator: Calculating Ka and Ks Through Model Selection and Model Averaging | Genomics, Proteomics and Bioinformatics | 2006 | 940 |
| 5 | Roles, Functions, and Mechanisms of Long Non-coding RNAs in Cancer | Genomics, Proteomics and Bioinformatics | 2016 | 789 |
| 6 | A Brief Review on the Mechanisms of miRNA Regulation | Genomics, Proteomics and Bioinformatics | 2009 | 711 |
| 7 | Transcriptional and Post-transcriptional Gene Regulation by Long Non-coding RNA | Genomics, Proteomics and Bioinformatics | 2017 | 661 |
| 8 | Oxford Nanopore MinION Sequencing and Genome Assembly | Genomics, Proteomics and Bioinformatics | 2016 | 638 |
| 9 | GSA: Genome Sequence Archive * | Genomics, Proteomics and Bioinformatics | 2017 | 563 |
| 10 | The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types | Genomics, Proteomics and Bioinformatics | 2021 | 504 |
| 11 | Chinese Glioma Genome Atlas (CGGA): A Comprehensive Resource with Functional Genomic Data from Chinese Glioma Patients | Genomics, Proteomics and Bioinformatics | 2021 | 439 |
| 12 | Deep Learning and Its Applications in Biomedicine | Genomics, Proteomics and Bioinformatics | 2018 | 420 |
| 13 | rMVP: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool for Genome-wide Association Study | Genomics, Proteomics and Bioinformatics | 2021 | 396 |
| 14 | N6-Methyl-Adenosine (m6A) in RNA: An Old Modification with A Novel Epigenetic Function | Genomics, Proteomics and Bioinformatics | 2013 | 368 |
| 15 | GAPIT Version 3: Boosting Power and Accuracy for Genomic Association and Prediction | Genomics, Proteomics and Bioinformatics | 2021 | 345 |
| 16 | Nanopore-based Fourth-generation DNA Sequencing Technology | Genomics, Proteomics and Bioinformatics | 2015 | 329 |
| 17 | MicroRNAs in Common Human Diseases | Genomics, Proteomics and Bioinformatics | 2012 | 314 |
| 18 | Long Non-coding RNAs in the Cytoplasm | Genomics, Proteomics and Bioinformatics | 2016 | 300 |
| 19 | YTH Domain: A Family of N 6 -methyladenosine (m 6 A) Readers | Genomics, Proteomics and Bioinformatics | 2018 | 277 |
| 20 | Human Gut Microbiota and Gastrointestinal Cancer | Genomics, Proteomics and Bioinformatics | 2018 | 260 |
| 21 | Long Non-coding RNAs and Their Biological Roles in Plants | Genomics, Proteomics and Bioinformatics | 2015 | 231 |
| 22 | Pharmacogenomics of Drug Metabolizing Enzymes and Transporters: Relevance to Precision Medicine | Genomics, Proteomics and Bioinformatics | 2016 | 227 |
| 23 | A Brief Review of Short Tandem Repeat Mutation | Genomics, Proteomics and Bioinformatics | 2007 | 220 |
| 24 | HCCDB: A Database of Hepatocellular Carcinoma Expression Atlas | Genomics, Proteomics and Bioinformatics | 2018 | 218 |
| 25 | Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function | Genomics, Proteomics and Bioinformatics | 2014 | 217 |
| 26 | Functions of PARylation in DNA Damage Repair Pathways | Genomics, Proteomics and Bioinformatics | 2016 | 215 |
| 27 | CIRCpedia v2: An Updated Database for Comprehensive Circular RNA Annotation and Expression Comparison | Genomics, Proteomics and Bioinformatics | 2018 | 206 |
| 28 | hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets | Genomics, Proteomics and Bioinformatics | 2020 | 201 |
| 29 | GPS 5.0: An Update on the Prediction of Kinase-specific Phosphorylation Sites in Proteins | Genomics, Proteomics and Bioinformatics | 2020 | 197 |
| 30 | CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy | Genomics, Proteomics and Bioinformatics | 2015 | 185 |
| 31 | Circulating Tumor DNA as Biomarkers for Cancer Detection | Genomics, Proteomics and Bioinformatics | 2017 | 185 |
| 32 | VASC: Dimension Reduction and Visualization of Single-cell RNA-seq Data by Deep Variational Autoencoder | Genomics, Proteomics and Bioinformatics | 2018 | 176 |
| 33 | Direct Comparative Analyses of 10X Genomics Chromium and Smart-seq2 | Genomics, Proteomics and Bioinformatics | 2021 | 167 |
| 34 | Intestinal Microbiota in Early Life and Its Implications on Childhood Health | Genomics, Proteomics and Bioinformatics | 2019 | 159 |
| 35 | SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug Combination Screening Datasets | Genomics, Proteomics and Bioinformatics | 2022 | 159 |
| 36 | Non-coding RNAs and Their Roles in Stress Response in Plants | Genomics, Proteomics and Bioinformatics | 2017 | 150 |
| 37 | Application of Next-generation Sequencing Technology in Forensic Science | Genomics, Proteomics and Bioinformatics | 2014 | 146 |
| 38 | Proteomics Technologies and Challenges | Genomics, Proteomics and Bioinformatics | 2007 | 140 |
| 39 | m6A Regulates Neurogenesis and Neuronal Development by Modulating Histone Methyltransferase Ezh2 | Genomics, Proteomics and Bioinformatics | 2019 | 135 |
| 40 | Inulin Can Alleviate Metabolism Disorders in ob/ob Mice by Partially Restoring Leptin-related Pathways Mediated by Gut Microbiota | Genomics, Proteomics and Bioinformatics | 2019 | 134 |
| 41 | The RNA Modification N 6 -methyladenosine and Its Implications in Human Disease | Genomics, Proteomics and Bioinformatics | 2017 | 132 |
| 42 | PTMD: A Database of Human Disease-associated Post-translational Modifications | Genomics, Proteomics and Bioinformatics | 2018 | 129 |
| 43 | Plant Small RNAs: Biogenesis, Mode of Action and Their Roles in Abiotic Stresses | Genomics, Proteomics and Bioinformatics | 2011 | 127 |
| 44 | PredSL: A Tool for the N-terminal Sequence-based Prediction of Protein Subcellular Localization | Genomics, Proteomics and Bioinformatics | 2006 | 125 |
| 45 | Reversible RNA Modification N 1 -methyladenosine (m 1 A) in mRNA and tRNA | Genomics, Proteomics and Bioinformatics | 2018 | 122 |
| 46 | Pathway-based Analysis Tools for Complex Diseases: A Review | Genomics, Proteomics and Bioinformatics | 2014 | 116 |
| 47 | FragAnchor: A Large-Scale Predictor of Glycosylphosphatidylinositol Anchors in Eukaryote Protein Sequences by Qualitative Scoring | Genomics, Proteomics and Bioinformatics | 2007 | 114 |
| 48 | Biogenesis of Mammalian MicroRNAs: A Global View | Genomics, Proteomics and Bioinformatics | 2012 | 112 |
| 49 | VICMpred: An SVM-based Method for the Prediction of Functional Proteins of Gram-negative Bacteria Using Amino Acid Patterns and Composition | Genomics, Proteomics and Bioinformatics | 2006 | 111 |
| 50 | Urinary Biomarkers of Brain Diseases | Genomics, Proteomics and Bioinformatics | 2015 | 110 |
