| # | Title | Journal | Year | Citations |
|---|
| 1 | Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) | Autophagy | 2016 | 4,701 |
| 2 | Guidelines for the use and interpretation of assays for monitoring autophagy | Autophagy | 2012 | 3,122 |
| 3 | Genome-wide association studies of 14 agronomic traits in rice landraces | Nature Genetics | 2010 | 1,978 |
| 4 | Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement | Nature Biotechnology | 2015 | 1,560 |
| 5 | A map of rice genome variation reveals the origin of cultivated rice | Nature | 2012 | 1,428 |
| 6 | Silencing a cotton bollworm P450 monooxygenase gene by plant-mediated RNAi impairs larval tolerance of gossypol | Nature Biotechnology | 2007 | 1,120 |
| 7 | Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm | Nature Genetics | 2012 | 1,030 |
| 8 | Arabidopsis PROTEASOME REGULATOR1 is required for auxin-mediated suppression of proteasome activity and regulates auxin signalling | Nature Communications | 2016 | 1,027 |
| 9 | Control of tillering in rice | Nature | 2003 | 988 |
| 10 | Acetylation of Metabolic Enzymes Coordinates Carbon Source Utilization and Metabolic Flux | Science | 2010 | 924 |
| 11 | Multigene Editing in the Escherichia coli Genome via the CRISPR-Cas9 System | Applied and Environmental Microbiology | 2015 | 908 |
| 12 | CRISPR-Cas12a-assisted nucleic acid detection | Cell Discovery | 2018 | 805 |
| 13 | Viral and host factors related to the clinical outcome of COVID-19 | Nature | 2020 | 746 |
| 14 | Control of Root Cap Formation by MicroRNA-Targeted Auxin Response Factors in Arabidopsis | Plant Cell | 2005 | 741 |
| 15 | The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation | Plant Biotechnology Journal | 2014 | 726 |
| 16 | Two Faces of One Seed: Hormonal Regulation of Dormancy and Germination | Molecular Plant | 2016 | 709 |
| 17 | Control of rice grain-filling and yield by a gene with a potential signature of domestication | Nature Genetics | 2008 | 706 |
| 18 | Plant hormone jasmonate prioritizes defense over growth by interfering with gibberellin signaling cascade | Proceedings of the National Academy of Sciences of the United States of America | 2012 | 697 |
| 19 | OsSPL13 controls grain size in cultivated rice | Nature Genetics | 2016 | 662 |
| 20 | CRISPR-Cas12a has both cis- and trans-cleavage activities on single-stranded DNA | Cell Research | 2018 | 623 |
| 21 | The Rice Tapetum Degeneration Retardation Gene Is Required for Tapetum Degradation and Anther Development | Plant Cell | 2006 | 615 |
| 22 | Pattern-recognition receptors are required for NLR-mediated plant immunity | Nature | 2021 | 590 |
| 23 | A Pseudomonas syringae Effector Inactivates MAPKs to Suppress PAMP-Induced Immunity in Plants | Cell Host and Microbe | 2007 | 585 |
| 24 | Plants transfer lipids to sustain colonization by mutualistic mycorrhizal and parasitic fungi | Science | 2017 | 584 |
| 25 | A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants | Trends in Plant Science | 2014 | 581 |
| 26 | Genome Sequencing and Comparative Transcriptomics of the Model Entomopathogenic Fungi Metarhizium anisopliae and M. acridum | PLoS Genetics | 2011 | 542 |
| 27 | Genomic perspectives on the evolution of fungal entomopathogenicity in Beauveria bassiana | Scientific Reports | 2012 | 512 |
| 28 | Pan-Genome of Wild and Cultivated Soybeans | Cell | 2020 | 508 |
| 29 | Arabidopsis MYC2 Interacts with DELLA Proteins in Regulating Sesquiterpene Synthase Gene Expression | Plant Cell | 2012 | 497 |
| 30 | Comparative Proteomic Analysis Provides New Insights into Chilling Stress Responses in Rice | Molecular and Cellular Proteomics | 2006 | 467 |
| 31 | Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study | BMC Bioinformatics | 2011 | 462 |
| 32 | Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice | Nature Genetics | 2018 | 453 |
| 33 | Proteomic analysis of salt stress-responsive proteins in rice root | Proteomics | 2005 | 433 |
| 34 | Characterization of GaWRKY1, a Cotton Transcription Factor That Regulates the Sesquiterpene Synthase Gene (+)-δ-Cadinene Synthase-A | Plant Physiology | 2004 | 417 |
| 35 | WOX11 and 12 Are Involved in the First-Step Cell Fate Transition during de Novo Root Organogenesis in Arabidopsis | Plant Cell | 2014 | 415 |
| 36 | TheArabidopsisNitrate Transporter NRT1.8 Functions in Nitrate Removal from the Xylem Sap and Mediates Cadmium Tolerance | Plant Cell | 2010 | 413 |
| 37 | A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica) | Nature Genetics | 2013 | 411 |
| 38 | HOLMESv2: A CRISPR-Cas12b-Assisted Platform for Nucleic Acid Detection and DNA Methylation Quantitation | ACS Synthetic Biology | 2019 | 405 |
| 39 | Exposure of soil collembolans to microplastics perturbs their gut microbiota and alters their isotopic composition | Soil Biology and Biochemistry | 2018 | 385 |
| 40 | The Jasmonate-Responsive AP2/ERF Transcription Factors AaERF1 and AaERF2 Positively Regulate Artemisinin Biosynthesis in Artemisia annua L. | Molecular Plant | 2012 | 379 |
| 41 | Transcriptome-wide investigation of circular RNAs in rice | Rna | 2015 | 362 |
| 42 | Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional chinese medicine | Genome Biology | 2011 | 359 |
| 43 | Efficient genome editing in filamentous fungus Trichoderma reesei using the CRISPR/Cas9 system | Cell Discovery | 2015 | 356 |
| 44 | COP1-Mediated Ubiquitination of CONSTANS Is Implicated in Cryptochrome Regulation of Flowering inArabidopsis | Plant Cell | 2008 | 355 |
| 45 | Functional analysis of rice NPR1-like genes reveals that OsNPR1/NH1 is the rice orthologue conferring disease resistance with enhanced herbivore susceptibility | Plant Biotechnology Journal | 2007 | 350 |
| 46 | Vacuolar membrane transporters OsVIT1 and OsVIT2 modulate iron translocation between flag leaves and seeds in rice | Plant Journal | 2012 | 345 |
| 47 | ELONGATED UPPERMOST INTERNODE Encodes a Cytochrome P450 Monooxygenase That Epoxidizes Gibberellins in a Novel Deactivation Reaction in Rice | Plant Cell | 2006 | 340 |
| 48 | Genomic architecture of heterosis for yield traits in rice | Nature | 2016 | 336 |
| 49 | Cryptochrome 1 interacts with PIF4 to regulate high temperature-mediated hypocotyl elongation in response to blue light | Proceedings of the National Academy of Sciences of the United States of America | 2016 | 332 |
| 50 | Control of Plant Trichome Development by a Cotton Fiber MYB Gene[W] | Plant Cell | 2004 | 326 |
