| # | Title | Journal | Year | Citations |
|---|
|
| 1 | Host diet and evolutionary history explain different aspects of gut microbiome diversity among vertebrate clades | Nature Communications | 2019 | 348 |
| 2 | Characterization of the major laccase isoenzyme from Trametes pubescens and regulation of its synthesis by metal ions a aThe GenBank accession numbers for the lap2 and lap1a genes reported in this paper are AF414807 and AF414808, respectively. | Microbiology (United Kingdom) | 2002 | 275 |
| 3 | Genetic engineering of Trichoderma reesei cellulases and their production | Microbial Biotechnology | 2017 | 217 |
| 4 | Citric Acid Fermentation | Critical Reviews in Biotechnology | 1985 | 211 |
| 5 | Evolution and comparative genomics of the most common Trichoderma species | BMC Genomics | 2019 | 205 |
| 6 | The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species | Microbiology and Molecular Biology Reviews | 2016 | 197 |
| 7 | The production of recombinant proteins in transgenic barley grains | Proceedings of the National Academy of Sciences of the United States of America | 2000 | 188 |
| 8 | Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts | PLoS Genetics | 2018 | 156 |
| 9 | Regulation of citric acid production by oxygen: Effect of dissolved oxygen tension on adenylate levels and respiration in Aspergillus niger | European Journal of Applied Microbiology and Biotechnology | 1980 | 118 |
| 10 | The Post-genomic Era of Trichoderma reesei : What's Next? | Trends in Biotechnology | 2016 | 109 |
| 11 | Enzyme Diffusion from Trichoderma atroviride (= T. harzianum P1) to Rhizoctonia solani Is a Prerequisite for Triggering of Trichoderma ech42 Gene Expression before Mycoparasitic Contact | Applied and Environmental Microbiology | 2000 | 105 |
| 12 | The β-d-xylosidase of Trichoderma reesei is a multifunctional β-d-xylan xylohydrolase | Biochemical Journal | 1997 | 103 |
| 13 | Global Distribution of Human-Associated Fecal Genetic Markers in Reference Samples from Six Continents | Environmental Science & Technology | 2018 | 79 |
| 14 | Novel Strategies for Genomic Manipulation of Trichoderma reesei with the Purpose of Strain Engineering | Applied and Environmental Microbiology | 2015 | 73 |
| 15 | RcoA has pleiotropic effects on Aspergillus nidulans cellular development | Molecular Microbiology | 2001 | 72 |
| 16 | A loop-mediated isothermal amplification (LAMP) assay for the rapid detection of Enterococcus spp. in water | Water Research | 2017 | 68 |
| 17 | Whole genome sequencing reveals resemblance between ESBL-producing and carbapenem resistant Klebsiella pneumoniae isolates from Austrian rivers and clinical isolates from hospitals | Science of the Total Environment | 2019 | 65 |
| 18 | A role for γ3 hordein in the transport and targeting of prolamin polypeptides to the vacuole of developing barley endosperm | Plant Journal | 1993 | 64 |
| 19 | Simultaneous Detection and Differentiation of Escherichia coli Populations from Environmental Freshwaters by Means of Sequence Variations in a Fragment of the β- d -Glucuronidase Gene | Applied and Environmental Microbiology | 2000 | 63 |
| 20 | A complete annotation of the chromosomes of the cellulase producer Trichoderma reesei provides insights in gene clusters, their expression and reveals genes required for fitness | Biotechnology for Biofuels | 2016 | 57 |
| 21 | Large-Scale Metagenome Assembly Reveals Novel Animal-Associated Microbial Genomes, Biosynthetic Gene Clusters, and Other Genetic Diversity | MSystems | 2020 | 57 |
| 22 | The impact of chromatin remodelling on cellulase expression in Trichoderma reesei | BMC Genomics | 2015 | 56 |
| 23 | Expression of xylanase enzymes from thermophilic microorganisms in fungal hosts | Extremophiles | 2002 | 52 |
| 24 | Xpp1 regulates the expression of xylanases, but not of cellulases in Trichoderma reesei | Biotechnology for Biofuels | 2015 | 51 |
| 25 | Rapid enzymatic detection of Escherichia coli contamination in polluted river water | Letters in Applied Microbiology | 2001 | 49 |
| 26 | Challenges and perspectives in the application of isothermal DNA amplification methods for food and water analysis | Analytical and Bioanalytical Chemistry | 2019 | 49 |
| 27 | The Relation Between Promoter Chromatin Status, Xyr1 and Cellulase Expression in Trichoderma reesei | Current Genomics | 2016 | 47 |
| 28 | Guttation capsules containing hydrogen peroxide: an evolutionarily conserved NADPH oxidase gains a role in wars between related fungi | Environmental Microbiology | 2019 | 45 |
| 29 | Cloning and molecular characterization of the Hevea brasiliensis allergen Hev b 11, a class I chitinase | Clinical and Experimental Allergy | 2002 | 42 |
| 30 | Influence of growth rate on the accumulation of ergosterol in yeast-cells | Biotechnology Letters | 1990 | 41 |
| 31 | Overexpression of the Saccharomyces cerevisiae Mannosylphosphodolichol Synthase-Encoding Gene in Trichoderma reesei Results in an Increased Level of Protein Secretion and Abnormal Cell Ultrastructure | Applied and Environmental Microbiology | 1999 | 41 |
| 32 | DNA aptamers against bacterial cells can be efficiently selected by a SELEX process using state-of-the art qPCR and ultra-deep sequencing | Scientific Reports | 2020 | 39 |
| 33 | Setback distances between small biological wastewater treatment systems and drinking water wells against virus contamination in alluvial aquifers | Science of the Total Environment | 2016 | 38 |
| 34 | The Constitutive Endopolygalacturonase TvPG2 Regulates the Induction of Plant Systemic Resistance by Trichoderma virens | Phytopathology | 2017 | 38 |
| 35 | Vertebrate host phylogeny influences gut archaeal diversity | Nature Microbiology | 2021 | 38 |
| 36 | The N‐acetylglucosamine catabolic gene cluster in Trichoderma reesei is controlled by the Ndt80‐like transcription factor RON1 | Molecular Microbiology | 2016 | 35 |
| 37 | Simple lysis of bacterial cells for DNA-based diagnostics using hydrophilic ionic liquids | Scientific Reports | 2019 | 35 |
| 38 | Several steps of lateral gene transfer followed by events of ‘birth-and-death’ evolution shaped a fungal sorbicillinoid biosynthetic gene cluster | BMC Evolutionary Biology | 2016 | 34 |
| 39 | Agricultural systems as potential sources of emerging human mycoses caused by Trichoderma: a successful, common phylotype of Trichoderma longibrachiatum in the frontline | FEMS Microbiology Letters | 2019 | 34 |
| 40 | Hydrolysis of 4-methylumbelliferyl-β-d-glucuronide in differing sample fractions of river waters and its implication for the detection of fecal pollution | Water Research | 2002 | 33 |
| 41 | HFB7 – A novel orphan hydrophobin of the Harzianum and Virens clades of Trichoderma, is involved in response to biotic and abiotic stresses | Fungal Genetics and Biology | 2017 | 31 |
| 42 | Genome Sequence and Annotation of Trichoderma parareesei , the Ancestor of the Cellulase Producer Trichoderma reesei | Genome Announcements | 2015 | 29 |
| 43 | Real-time monitoring of beta-d-glucuronidase activity in sediment laden streams: A comparison of prototypes | Water Research | 2016 | 27 |
| 44 | Detection of a microbial source tracking marker by isothermal helicase-dependent amplification and a nucleic acid lateral-flow strip test | Scientific Reports | 2019 | 27 |
| 45 | Modelling the interplay of future changes and wastewater management measures on the microbiological river water quality considering safe drinking water production | Science of the Total Environment | 2021 | 27 |
| 46 | The role of the alternative respiratory pathway in the stimulation of cephalosporin C formation by soybean oil in Acremonium chrysogenum | Applied Microbiology and Biotechnology | 1999 | 26 |
| 47 | QMRAcatch: Human‐Associated Fecal Pollution and Infection Risk Modeling for a River/Floodplain Environment | Journal of Environmental Quality | 2016 | 26 |
| 48 | Spring Water of an Alpine Karst Aquifer Is Dominated by a Taxonomically Stable but Discharge-Responsive Bacterial Community | Frontiers in Microbiology | 2019 | 26 |
| 49 | Improving the identification of the source of faecal pollution in water using a modelling approach: From multi-source to aged and diluted samples | Water Research | 2020 | 26 |
| 50 | Evaluation of Genotoxic Pressure along the Sava River | PLoS ONE | 2016 | 25 |
