# | Title | Journal | Year | Citations |
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|
1 | QIIME allows analysis of high-throughput community sequencing data | Nature Methods | 2010 | 32,880 |
2 | Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample | Proceedings of the National Academy of Sciences of the United States of America | 2011 | 7,834 |
3 | Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms | ISME Journal | 2012 | 7,737 |
4 | UniFrac: a New Phylogenetic Method for Comparing Microbial Communities | Applied and Environmental Microbiology | 2005 | 7,236 |
5 | Transformation of the Nitrogen Cycle: Recent Trends, Questions, and Potential Solutions | Science | 2008 | 5,464 |
6 | Obesity alters gut microbial ecology | Proceedings of the National Academy of Sciences of the United States of America | 2005 | 5,403 |
7 | Computer Visualization of Three-Dimensional Image Data Using IMOD | Journal of Structural Biology | 1996 | 5,178 |
8 | Automated electron microscope tomography using robust prediction of specimen movements | Journal of Structural Biology | 2005 | 4,664 |
9 | Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases | Proceedings of the National Academy of Sciences of the United States of America | 2007 | 3,981 |
10 | TOWARD AN ECOLOGICAL CLASSIFICATION OF SOIL BACTERIA | Ecology | 2007 | 3,939 |
11 | Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns | Proceedings of the National Academy of Sciences of the United States of America | 2010 | 3,866 |
12 | Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale | Applied and Environmental Microbiology | 2009 | 3,412 |
13 | Soil bacterial and fungal communities across a pH gradient in an arable soil | ISME Journal | 2010 | 3,306 |
14 | Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice | Science | 2013 | 3,102 |
15 | Habitat fragmentation and its lasting impact on Earth’s ecosystems | Science Advances | 2015 | 2,751 |
16 | Quantitative and Qualitative β Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities | Applied and Environmental Microbiology | 2007 | 2,530 |
17 | Embracing the unknown: disentangling the complexities of the soil microbiome | Nature Reviews Microbiology | 2017 | 2,273 |
18 | Using network analysis to explore co-occurrence patterns in soil microbial communities | ISME Journal | 2012 | 2,210 |
19 | Chemotaxis in Escherichia coli analysed by Three-dimensional Tracking | Nature | 1972 | 2,092 |
20 | A communal catalogue reveals Earth’s multiscale microbial diversity | Nature | 2017 | 2,060 |
21 | Emerging threats and persistent conservation challenges for freshwater biodiversity | Biological Reviews | 2019 | 2,037 |
22 | Navigating the multiple meanings of β diversity: a roadmap for the practicing ecologist | Ecology Letters | 2011 | 1,972 |
23 | C:N:P stoichiometry in soil: is there a “Redfield ratio” for the microbial biomass? | Biogeochemistry | 2007 | 1,801 |
24 | Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea | Nature Biotechnology | 2017 | 1,660 |
25 | Global patterns in bacterial diversity | Proceedings of the National Academy of Sciences of the United States of America | 2007 | 1,521 |
26 | Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients | ISME Journal | 2012 | 1,488 |
27 | Patterns and Processes of Microbial Community Assembly | Microbiology and Molecular Biology Reviews | 2013 | 1,410 |
28 | Bayesian community-wide culture-independent microbial source tracking | Nature Methods | 2011 | 1,361 |
29 | UniFrac--an online tool for comparing microbial community diversity in a phylogenetic context | BMC Bioinformatics | 2006 | 1,347 |
30 | Cross-biome metagenomic analyses of soil microbial communities and their functional attributes | Proceedings of the National Academy of Sciences of the United States of America | 2012 | 1,309 |
31 | Stress granules and processing bodies are dynamically linked sites of mRNP remodeling | Journal of Cell Biology | 2005 | 1,269 |
32 | Cortical Excitatory Neurons and Glia, But Not GABAergic Neurons, Are Produced in the Emx1-Expressing Lineage | Journal of Neuroscience | 2002 | 1,230 |
33 | Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex | Nature Methods | 2008 | 1,207 |
34 | A role for CD95 ligand in preventing graft rejection | Nature | 1995 | 1,154 |
35 | Examining the global distribution of dominant archaeal populations in soil | ISME Journal | 2011 | 1,151 |
36 | GENERALITY OF LEAF TRAIT RELATIONSHIPS: A TEST ACROSS SIX BIOMES | Ecology | 1999 | 1,124 |
37 | Environmental and stoichiometric controls on microbial carbon‐use efficiency in soils | New Phytologist | 2012 | 1,122 |
38 | Identifying DNA and protein patterns with statistically significant alignments of multiple sequences. | Bioinformatics | 1999 | 1,104 |
39 | Receptor downregulation and multivesicular-body sorting | Nature Reviews Molecular Cell Biology | 2002 | 1,097 |
40 | Inhibition of telomerase by G-quartet DMA structures | Nature | 1991 | 1,094 |
41 | Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe | Proceedings of the National Academy of Sciences of the United States of America | 2015 | 1,088 |
42 | The minimum information about a genome sequence (MIGS) specification | Nature Biotechnology | 2008 | 1,076 |
43 | Dual-Axis Tomography: An Approach with Alignment Methods That Preserve Resolution | Journal of Structural Biology | 1997 | 1,053 |
44 | A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses | ISME Journal | 2009 | 1,023 |
45 | Bacterial phylogeny structures soil resistomes across habitats | Nature | 2014 | 1,019 |
46 | The influence of sex, handedness, and washing on the diversity of hand surface bacteria | Proceedings of the National Academy of Sciences of the United States of America | 2008 | 1,001 |
47 | Global patterns in belowground communities | Ecology Letters | 2009 | 998 |
48 | Climate Change and Infectious Diseases: From Evidence to a Predictive Framework | Science | 2013 | 987 |
49 | Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes | Global Change Biology | 2012 | 982 |
50 | Moving pictures of the human microbiome | Genome Biology | 2011 | 956 |