| # | Title | Journal | Year | Citations |
|---|
| 1 | The Nodule Microbiome: N2-Fixing Rhizobia Do Not Live Alone | Phytobiomes Journal | 2017 | 215 |
| 2 | The Wheat Microbiome Under Four Management Strategies, and Potential for Endophytes in Disease Protection | Phytobiomes Journal | 2017 | 141 |
| 3 | Tomato Seeds Preferably Transmit Plant Beneficial Endophytes | Phytobiomes Journal | 2018 | 124 |
| 4 | Quantitative Genetics of the Maize Leaf Microbiome | Phytobiomes Journal | 2018 | 110 |
| 5 | Identification and Characterization of the Core Rice Seed Microbiome | Phytobiomes Journal | 2019 | 73 |
| 6 | Microbiome Alterations Are Correlated with Occurrence of Postharvest Stem-End Rot in Mango Fruit | Phytobiomes Journal | 2017 | 72 |
| 7 | Heritability and Functional Importance of the Setaria viridis Bacterial Seed Microbiome | Phytobiomes Journal | 2020 | 71 |
| 8 | The Influence of Flower Anatomy and Apple Cultivar on the Apple Flower Phytobiome | Phytobiomes Journal | 2018 | 62 |
| 9 | Root-Associated Microbiome of Maize Genotypes with Contrasting Phosphorus Use Efficiency | Phytobiomes Journal | 2018 | 59 |
| 10 | The Rice Microbiome: A Model Platform for Crop Holobiome | Phytobiomes Journal | 2020 | 57 |
| 11 | Bacterial Communities on Wheat Grown Under Long-Term Conventional Tillage and No-Till in the Pacific Northwest of the United States | Phytobiomes Journal | 2017 | 56 |
| 12 | Translating Phytobiomes from Theory to Practice: Ecological and Evolutionary Considerations | Phytobiomes Journal | 2017 | 56 |
| 13 | Disease-Induced Microbial Shifts in Citrus Indicate Microbiome-Derived Responses to Huanglongbing Across the Disease Severity Spectrum | Phytobiomes Journal | 2020 | 53 |
| 14 | Microbiomes and Pathogen Survival in Crop Residues, an Ecotone Between Plant and Soil | Phytobiomes Journal | 2019 | 51 |
| 15 | Diversity of Phytophthora, Pythium, and Phytopythium Species in Recycled Irrigation Water in a Container Nursery | Phytobiomes Journal | 2019 | 49 |
| 16 | Microbial Landscape of the Grapevine Endosphere in the Context of Pierce’s Disease | Phytobiomes Journal | 2017 | 48 |
| 17 | Variation in Bacterial and Eukaryotic Communities Associated with Natural and Managed Wild Blueberry Habitats | Phytobiomes Journal | 2017 | 47 |
| 18 | Disease Incidence in Sugar Beet Fields Is Correlated with Microbial Diversity and Distinct Biological Markers | Phytobiomes Journal | 2019 | 47 |
| 19 | Candidate Causal Organisms for Apple Replant Disease in the United Kingdom | Phytobiomes Journal | 2018 | 43 |
| 20 | Genetic Differences in Barley Govern the Responsiveness to N-Acyl Homoserine Lactone | Phytobiomes Journal | 2019 | 43 |
| 21 | Microbiota Associated with Sclerotia of Soilborne Fungal Pathogens – A Novel Source of Biocontrol Agents Producing Bioactive Volatiles | Phytobiomes Journal | 2019 | 41 |
| 22 | Root Endophytes of Coffee (Coffea arabica): Variation Across Climatic Gradients and Relationships with Functional Traits | Phytobiomes Journal | 2020 | 41 |
| 23 | Differential Spread of Grapevine Red Blotch Virus in California and New York Vineyards | Phytobiomes Journal | 2019 | 39 |
| 24 | Discovery of Known and Novel Viral Genomes in Soybean Aphid by Deep Sequencing | Phytobiomes Journal | 2017 | 38 |
| 25 | Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities | Phytobiomes Journal | 2019 | 38 |
| 26 | Root-Associated Bacterial and Fungal Community Profiles of Arabidopsis thaliana Are Robust Across Contrasting Soil P Levels | Phytobiomes Journal | 2018 | 37 |
| 27 | Petunia- and Arabidopsis-Specific Root Microbiota Responses to Phosphate Supplementation | Phytobiomes Journal | 2019 | 37 |
| 28 | Tomato Seed-Associated Bacteria Confer Protection of Seedlings Against Foliar Disease Caused by Pseudomonas syringae | Phytobiomes Journal | 2019 | 36 |
| 29 | Topography-Driven Shape, Spread, and Retention of Leaf Surface Water Impacts Microbial Dispersion and Activity in the Phyllosphere | Phytobiomes Journal | 2020 | 36 |
| 30 | Isolation of Cultivation-Resistant Oomycetes, First Detected as Amplicon Sequences, from Roots of Herbicide-Terminated Winter Rye | Phytobiomes Journal | 2017 | 34 |
| 31 | Influence of Environment and Host Plant Genotype on the Structure and Diversity of the Brassica napus Seed Microbiota | Phytobiomes Journal | 2019 | 34 |
| 32 | Profiling the Lolium perenne Microbiome: From Seed to Seed | Phytobiomes Journal | 2020 | 34 |
| 33 | Ecological Assembly Processes of the Bacterial and Fungal Microbiota of Wild and Domesticated Wheat Species | Phytobiomes Journal | 2020 | 34 |
| 34 | Pathogen Detection and Microbiome Analysis of Infected Wheat Using a Portable DNA Sequencer | Phytobiomes Journal | 2019 | 33 |
| 35 | Datamining, Genetic Diversity Analyses, and Phylogeographic Reconstructions Redefine the Worldwide Evolutionary History of Grapevine Pinot gris virus and Grapevine berry inner necrosis virus | Phytobiomes Journal | 2020 | 33 |
| 36 | Nitrogen Fertilization Reduces Nitrogen Fixation Activity of Diverse Diazotrophs in Switchgrass Roots | Phytobiomes Journal | 2021 | 33 |
| 37 | Tomato-Associated Archaea Show a Cultivar-Specific Rhizosphere Effect but an Unspecific Transmission by Seeds | Phytobiomes Journal | 2020 | 31 |
| 38 | Plant–Microbe Interactions: From Genes to Ecosystems Using Populus as a Model System | Phytobiomes Journal | 2021 | 31 |
| 39 | Priming Is a Suitable Strategy to Enhance Resistance Towards Leaf Rust in Barley | Phytobiomes Journal | 2019 | 30 |
| 40 | Overexpression of Strigolactone-Associated Genes Exerts Fine-Tuning Selection on Soybean Rhizosphere Bacterial and Fungal Microbiome | Phytobiomes Journal | 2020 | 30 |
| 41 | Carbon Source and Soil Origin Shape Soil Microbiomes and Tomato Soilborne Pathogen Populations During Anaerobic Soil Disinfestation | Phytobiomes Journal | 2018 | 29 |
| 42 | The Switchgrass Microbiome: A Review of Structure, Function, and Taxonomic Distribution | Phytobiomes Journal | 2021 | 29 |
| 43 | Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria | Phytobiomes Journal | 2021 | 29 |
| 44 | Selection and Experimental Evaluation of Universal Primers to Study the Fungal Microbiome of Higher Plants | Phytobiomes Journal | 2018 | 28 |
| 45 | Identification of Fungal Communities Within the Tar Spot Complex of Corn in Michigan via Next-Generation Sequencing | Phytobiomes Journal | 2019 | 28 |
| 46 | Agricultural Management Affects Root-Associated Microbiome Recruitment Over Maize Development | Phytobiomes Journal | 2019 | 28 |
| 47 | Distinguishing Between the Impacts of Heat and Drought Stress on the Root Microbiome of Sorghum bicolor | Phytobiomes Journal | 2021 | 28 |
| 48 | Cropping History Effects on Pathogen Suppressive and Signaling Dynamics in Streptomyces Communities | Phytobiomes Journal | 2018 | 27 |
| 49 | Microbial Communities Associated with Storage Onion | Phytobiomes Journal | 2018 | 27 |
| 50 | Deciphering the Rhizosphere and Geocaulosphere Microbiomes of Potato Following Inoculation with the Biocontrol Agent Pseudomonas fluorescens Strain LBUM223 | Phytobiomes Journal | 2018 | 27 |
