7.4(top 2%)
impact factor
1.1K(top 20%)
papers
48.0K(top 10%)
citations
96(top 5%)
h-index
7.6(top 5%)
extended IF
1.1K
all documents
66.3K
doc citations
187(top 5%)
g-index

Top Articles

#TitleJournalYearCitations
1The Molecular Signatures Database Hallmark Gene Set CollectionCell Systems20158,660
2Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C ExperimentsCell Systems20162,366
3DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest NeighborsCell Systems20192,056
4Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic DataCell Systems20191,485
5Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited ZoomCell Systems20161,383
6A Single-Cell Transcriptomic Map of the Human and Mouse Pancreas Reveals Inter- and Intra-cell Population StructureCell Systems20161,193
7A Single-Cell Transcriptome Atlas of the Human PancreasCell Systems20161,039
8Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic PipelinesCell Systems2018645
9Plasma Proteome Profiling to Assess Human Health and DiseaseCell Systems2016581
10Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilisCell Systems2017486
11Ultra-High-Throughput Clinical Proteomics Reveals Classifiers of COVID-19 InfectionCell Systems2020485
12Large-Scale Multi-omic Analysis of COVID-19 SeverityCell Systems2021478
13Gene Regulatory Network Inference from Single-Cell Data Using Multivariate Information MeasuresCell Systems2017449
14An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human ProteomesCell Systems2017446
15A Multi-network Approach Identifies Protein-Specific Co-expression in Asymptomatic and Symptomatic Alzheimer’s DiseaseCell Systems2017406
16Unification of Protein Abundance Datasets Yields a Quantitative Saccharomyces cerevisiae ProteomeCell Systems2018380
17Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle HeterogeneityCell Systems2016352
18Antithetic Integral Feedback Ensures Robust Perfect Adaptation in Noisy Biomolecular NetworksCell Systems2016343
19The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to PerturbationsCell Systems2018342
20MHCflurry: Open-Source Class I MHC Binding Affinity PredictionCell Systems2018333
21Engineering Modular Viral Scaffolds for Targeted Bacterial Population EditingCell Systems2015318
22Juicebox.js Provides a Cloud-Based Visualization System for Hi-C DataCell Systems2018318
23Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome AtlasCell Systems2018307
24Compensation of Signal Spillover in Suspension and Imaging Mass CytometryCell Systems2018303
25End-to-End Differentiable Learning of Protein StructureCell Systems2019292
26Programming a Human Commensal Bacterium, Bacteroides thetaiotaomicron, to Sense and Respond to Stimuli in the Murine Gut MicrobiotaCell Systems2015279
27Efficient Multiplexed Integration of Synergistic Alleles and Metabolic Pathways in Yeasts via CRISPR-CasCell Systems2015279
28Shotgun Metagenomics of 250 Adult Twins Reveals Genetic and Environmental Impacts on the Gut MicrobiomeCell Systems2016275
29Four Key Steps Control Glycolytic Flux in Mammalian CellsCell Systems2018274
30Systems Biology of Cancer MetastasisCell Systems2019271
31Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen OverflowCell Systems2017265
32NDEx, the Network Data ExchangeCell Systems2015259
33Geospatial Resolution of Human and Bacterial Diversity with City-Scale MetagenomicsCell Systems2015252
34SingleCellNet: A Computational Tool to Classify Single Cell RNA-Seq Data Across Platforms and Across SpeciesCell Systems2019251
35Learning the protein language: Evolution, structure, and functionCell Systems2021245
36Matched-Comparative Modeling of Normal and Diseased Human Airway Responses Using a Microengineered Breathing Lung ChipCell Systems2016243
37BioJupies: Automated Generation of Interactive Notebooks for RNA-Seq Data Analysis in the CloudCell Systems2018230
38Simultaneous Multiplexed Imaging of mRNA and Proteins with Subcellular Resolution in Breast Cancer Tissue Samples by Mass CytometryCell Systems2018229
39Systematic Evaluation of Molecular Networks for Discovery of Disease GenesCell Systems2018222
40A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell MetabolismCell Systems2016218
41Compact Integration of Multi-Network Topology for Functional Analysis of GenesCell Systems2016217
42hctsa : A Computational Framework for Automated Time-Series Phenotyping Using Massive Feature ExtractionCell Systems2017212
43Multiplexed Epitope-Based Tissue Imaging for Discovery and Healthcare ApplicationsCell Systems2016209
44The Genomic Landscape and Pharmacogenomic Interactions of Clock Genes in Cancer ChronotherapyCell Systems2018200
45MHCflurry 2.0: Improved Pan-Allele Prediction of MHC Class I-Presented Peptides by Incorporating Antigen ProcessingCell Systems2020199
46Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed MigrationCell Systems2016191
47Quantitative Missense Variant Effect Prediction Using Large-Scale Mutagenesis DataCell Systems2018190
48The Biomarker GlycA Is Associated with Chronic Inflammation and Predicts Long-Term Risk of Severe InfectionCell Systems2015189
49Integrative Personal Omics Profiles during Periods of Weight Gain and LossCell Systems2018188
50A Systematic Evaluation of Methods for Tailoring Genome-Scale Metabolic ModelsCell Systems2017186