| # | Title | Journal | Year | Citations |
|---|
| 1 | Map Manager QTX, cross-platform software for genetic mapping | Mammalian Genome | 2001 | 1,114 |
| 2 | Interpreting cDNA sequences: Some insights from studies on translation | Mammalian Genome | 1996 | 784 |
| 3 | Behavioral and functional analysis of mouse phenotype: SHIRPA, a proposed protocol for comprehensive phenotype assessment | Mammalian Genome | 1997 | 721 |
| 4 | Maps from two interspecific backcross DNA panels available as a community genetic mapping resource | Mammalian Genome | 1994 | 652 |
| 5 | A Macintosh program for storage and analysis of experimental genetic mapping data | Mammalian Genome | 1993 | 642 |
| 6 | The PiGMaP consortium linkage map of the pig (Sus scrofa) | Mammalian Genome | 1995 | 475 |
| 7 | Overview of QTL mapping software and introduction to Map Manager QT | Mammalian Genome | 1999 | 424 |
| 8 | Noncoding RNA in development | Mammalian Genome | 2008 | 423 |
| 9 | Molecular definition of an allelic series of mutations disrupting the myostatin function and causing double-muscling in cattle | Mammalian Genome | 1998 | 422 |
| 10 | The diversity outbred mouse population | Mammalian Genome | 2012 | 406 |
| 11 | The microbiome: stress, health and disease | Mammalian Genome | 2014 | 361 |
| 12 | A missense variant of the porcine melanocortin-4 receptor (MC4R) gene is associated with fatness, growth, and feed intake traits | Mammalian Genome | 2000 | 358 |
| 13 | The role of melanocyte-stimulating hormone (MSH) receptor in bovine coat color determination | Mammalian Genome | 1995 | 356 |
| 14 | Weighted gene coexpression network analysis strategies applied to mouse weight | Mammalian Genome | 2007 | 337 |
| 15 | Mammalian microRNAs: a small world for fine-tuning gene expression | Mammalian Genome | 2006 | 329 |
| 16 | A medium-density genetic linkage map of the bovine genome | Mammalian Genome | 1997 | 313 |
| 17 | A first-generation porcine whole-genome radiation hybrid map | Mammalian Genome | 1999 | 305 |
| 18 | The mammalian gene function resource: the international knockout mouse consortium | Mammalian Genome | 2012 | 292 |
| 19 | A class of highly polymorphic tetranucleotide repeats for canine genetic mapping | Mammalian Genome | 1996 | 290 |
| 20 | Gene structure of human and mouse methylenetetrahydrofolate reductase (MTHFR) | Mammalian Genome | 1998 | 287 |
| 21 | A missense mutation in the gene for melanocyte-stimulating hormone receptor (MCIR) is associated with the chestnut coat color in horses | Mammalian Genome | 1996 | 284 |
| 22 | A set of 99 cattle microsatellites: characterization, synteny mapping, and polymorphism | Mammalian Genome | 1994 | 279 |
| 23 | Early embryonic lethality in mice deficient in the p110β catalytic subunit of PI 3-kinase | Mammalian Genome | 2002 | 276 |
| 24 | The International Mouse Phenotyping Consortium: past and future perspectives on mouse phenotyping | Mammalian Genome | 2012 | 257 |
| 25 | Mutations in the agouti (ASIP), the extension (MC1R), and the brown (TYRP1) loci and their association to coat color phenotypes in horses (Equus caballus) | Mammalian Genome | 2001 | 256 |
| 26 | A molecular genome scan analysis to identify chromosomal regions influencing economic traits in the pig. I. Growth and body composition | Mammalian Genome | 2001 | 254 |
| 27 | Genotype of stearoyl-CoA desaturase is associated with fatty acid composition in Japanese Black cattle | Mammalian Genome | 2004 | 251 |
| 28 | The Collaborative Cross at Oak Ridge National Laboratory: developing a powerful resource for systems genetics | Mammalian Genome | 2008 | 245 |
| 29 | A molecular genome scan analysis to identify chromosomal regions influencing economic traits in the pig. II. Meat and muscle composition | Mammalian Genome | 2001 | 237 |
| 30 | The polymorphism architecture of mouse genetic resources elucidated using genome-wide resequencing data: implications for QTL discovery and systems genetics | Mammalian Genome | 2007 | 237 |
| 31 | A rat genetic linkage map and comparative maps for mouse or human homologous rat genes | Mammalian Genome | 1994 | 212 |
| 32 | A whole-genome radiation hybrid panel for bovine gene mapping | Mammalian Genome | 1997 | 212 |
| 33 | A mouse phenome project | Mammalian Genome | 2000 | 211 |
| 34 | Nonrandom segregation during meiosis: the unfairness of females | Mammalian Genome | 2001 | 209 |
| 35 | Organization of the leukocyte receptor cluster (LRC) on human Chromosome 19q13.4 | Mammalian Genome | 1999 | 207 |
| 36 | The murine perilipin gene: the lipid droplet-associated perilipins derive from tissue-specific, mRNA splice variants and define a gene family of ancient origin | Mammalian Genome | 2001 | 206 |
| 37 | Genealogy of the 129 inbred strains: 129/SvJ is a contaminated inbred strain | Mammalian Genome | 1997 | 201 |
| 38 | Selection and use of SNP markers for animal identification and paternity analysis in U.S. beef cattle | Mammalian Genome | 2002 | 199 |
| 39 | The olfactory receptor gene superfamily: data mining, classification, and nomenclature | Mammalian Genome | 2000 | 196 |
| 40 | Pigs with the dominant white coat color phenotype carry a duplication of the KIT gene encoding the mast/stem cell growth factor receptor | Mammalian Genome | 1996 | 195 |
| 41 | Molecular and pharmacological characterization of dominant black coat color in sheep | Mammalian Genome | 1999 | 194 |
| 42 | Melanocortin 1 receptor variation in the domestic dog | Mammalian Genome | 2000 | 194 |
| 43 | Comparative analysis of the cattle and human genomes: detection of ZOO-FISH and gene mapping-based chromosomal homologies | Mammalian Genome | 1996 | 192 |
| 44 | Genetic dissection of complex and quantitative traits: from fantasy to reality via a community effort | Mammalian Genome | 2002 | 191 |
| 45 | Estimation of microsatellite mutation rates in recombinant inbred strains of mouse | Mammalian Genome | 1992 | 189 |
| 46 | Identification and characterization of members of the FKHR (FOX O) subclass of winged-helix transcription factors in the mouse | Mammalian Genome | 2001 | 187 |
| 47 | Genotyping new BXD recombinant inbred mouse strains and comparison of BXD and consensus maps | Mammalian Genome | 1999 | 186 |
| 48 | Identification of the translocation breakpoints in the Ts65Dn and Ts1Cje mouse lines: relevance for modeling down syndrome | Mammalian Genome | 2011 | 186 |
| 49 | Secreted protein prediction system combining CJ-SPHMM, TMHMM, and PSORT | Mammalian Genome | 2003 | 184 |
| 50 | Creating reference gene annotation for the mouse C57BL6/J genome assembly | Mammalian Genome | 2015 | 182 |
