# | Title | Journal | Year | Citations |
---|
|
1 | BEAST: Bayesian evolutionary analysis by sampling trees | BMC Evolutionary Biology | 2007 | 11,266 |
2 | A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes | BMC Evolutionary Biology | 2013 | 1,295 |
3 | BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments | BMC Evolutionary Biology | 2010 | 1,222 |
4 | Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified | BMC Evolutionary Biology | 2006 | 984 |
5 | Phylogenetic classification of bony fishes | BMC Evolutionary Biology | 2017 | 699 |
6 | Bayesian inference of population size history from multiple loci | BMC Evolutionary Biology | 2008 | 681 |
7 | bModelTest: Bayesian phylogenetic site model averaging and model comparison | BMC Evolutionary Biology | 2017 | 661 |
8 | The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants | BMC Evolutionary Biology | 2005 | 655 |
9 | BLAST-EXPLORER helps you building datasets for phylogenetic analysis | BMC Evolutionary Biology | 2010 | 649 |
10 | Selecting optimal partitioning schemes for phylogenomic datasets | BMC Evolutionary Biology | 2014 | 602 |
11 | Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model | BMC Evolutionary Biology | 2007 | 571 |
12 | A maximum pseudo-likelihood approach for estimating species trees under the coalescent model | BMC Evolutionary Biology | 2010 | 561 |
13 | Cryptic animal species are homogeneously distributed among taxa and biogeographical regions | BMC Evolutionary Biology | 2007 | 532 |
14 | A molecular timescale of eukaryote evolution and the rise of complex multicellular life | BMC Evolutionary Biology | 2004 | 506 |
15 | A genomic timescale of prokaryote evolution: insights into the origin of methanogenesis, phototrophy, and the colonization of land | BMC Evolutionary Biology | 2004 | 501 |
16 | From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes | BMC Evolutionary Biology | 2014 | 485 |
17 | A phylogenetic framework for evolutionary study of the nightshades (Solanaceae): a dated 1000-tip tree | BMC Evolutionary Biology | 2013 | 470 |
18 | Phylogenetic estimation error can decrease the accuracy of species delimitation: a Bayesian implementation of the general mixed Yule-coalescent model | BMC Evolutionary Biology | 2012 | 459 |
19 | A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis | BMC Evolutionary Biology | 2006 | 432 |
20 | Insights on the evolution of trehalose biosynthesis | BMC Evolutionary Biology | 2006 | 406 |
21 | A glimpse on the pattern of rodent diversification: a phylogenetic approach | BMC Evolutionary Biology | 2012 | 404 |
22 | Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5) | BMC Evolutionary Biology | 2012 | 401 |
23 | Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions | BMC Evolutionary Biology | 2006 | 395 |
24 | Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants | BMC Evolutionary Biology | 2015 | 380 |
25 | Dynamics and evolution of the inverted repeat-large single copy junctions in the chloroplast genomes of monocots | BMC Evolutionary Biology | 2008 | 372 |
26 | Differential impact of simultaneous migration on coevolving hosts and parasites | BMC Evolutionary Biology | 2007 | 360 |
27 | Thirteen Camelliachloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships | BMC Evolutionary Biology | 2014 | 360 |
28 | Genome size differentiates co-occurring populations of the planktonic diatom Ditylum brightwellii(Bacillariophyta) | BMC Evolutionary Biology | 2010 | 343 |
29 | A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study | BMC Evolutionary Biology | 2007 | 324 |
30 | A phylogeny and molecular barcodes for Caenorhabditis, with numerous new species from rotting fruits | BMC Evolutionary Biology | 2011 | 324 |
31 | Out of Tanganyika: genesis, explosive speciation, key-innovations and phylogeography of the haplochromine cichlid fishes | BMC Evolutionary Biology | 2005 | 322 |
32 | Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes | BMC Evolutionary Biology | 2003 | 321 |
33 | Subfunctionalization of duplicated genes as a transition state to neofunctionalization | BMC Evolutionary Biology | 2005 | 318 |
34 | PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change | BMC Evolutionary Biology | 2006 | 317 |
35 | Phylogenomic reconstruction of lactic acid bacteria: an update | BMC Evolutionary Biology | 2011 | 317 |
36 | Diversity begets diversity: host expansions and the diversification of plant-feeding insects | BMC Evolutionary Biology | 2006 | 314 |
37 | Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryzaand their phylogenetic utility across various taxonomic levels | BMC Evolutionary Biology | 2010 | 311 |
38 | Genome-wide comparative phylogenetic analysis of the rice and Arabidopsis Dof gene families | BMC Evolutionary Biology | 2003 | 308 |
39 | Molecular evolution of the reactive oxygen-generating NADPH oxidase (Nox/Duox) family of enzymes | BMC Evolutionary Biology | 2007 | 305 |
40 | Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution | BMC Evolutionary Biology | 2007 | 305 |
41 | Codon usage bias and the evolution of influenza A viruses. Codon Usage Biases of Influenza Virus | BMC Evolutionary Biology | 2010 | 302 |
42 | A survey of nuclear ribosomal internal transcribed spacer substitution rates across angiosperms: an approximate molecular clock with life history effects | BMC Evolutionary Biology | 2006 | 293 |
43 | Annelid phylogeny and the status of Sipuncula and Echiura | BMC Evolutionary Biology | 2007 | 289 |
44 | Origin of land plants: Do conjugating green algae hold the key? | BMC Evolutionary Biology | 2011 | 283 |
45 | The taxonomy of Enterobacter sakazakii: proposal of a new genus Cronobacter gen. nov. and descriptions of Cronobacter sakazakii comb. nov. Cronobacter sakazakii subsp. sakazakii, comb. nov., Cronobacter sakazakii subsp. malonaticus subsp. nov., Cronobacter turicensis sp. nov., Cronobacter muytjensii sp. nov., Cronobacter dublinensis sp. nov. and Cronobacter genomospecies 1 | BMC Evolutionary Biology | 2007 | 282 |
46 | New approaches for unravelling reassortment pathways | BMC Evolutionary Biology | 2013 | 281 |
47 | Environmental variation and rivers govern the structure of chimpanzee genetic diversity in a biodiversity hotspot | BMC Evolutionary Biology | 2015 | 278 |
48 | Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses | BMC Evolutionary Biology | 2013 | 277 |
49 | Heterotachy and long-branch attraction in phylogenetics | BMC Evolutionary Biology | 2005 | 276 |
50 | Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling | BMC Evolutionary Biology | 2011 | 276 |