3.7(top 10%)
impact factor
10.8K(top 2%)
papers
417.8K(top 1%)
citations
228(top 1%)
h-index
4.4(top 10%)
extended IF
101.7K
all documents
501.7K
doc citations
393(top 1%)
g-index

Top Articles

#TitleJournalYearCitations
1Unicycler: Resolving bacterial genome assemblies from short and long sequencing readsPLoS Computational Biology20175,684
2BEAST 2: A Software Platform for Bayesian Evolutionary AnalysisPLoS Computational Biology20145,546
3Accelerated Profile HMM SearchesPLoS Computational Biology20115,431
4Software for Computing and Annotating Genomic RangesPLoS Computational Biology20133,514
5BEAST 2.5: An advanced software platform for Bayesian evolutionary analysisPLoS Computational Biology20192,798
6The Human Connectome: A Structural Description of the Human BrainPLoS Computational Biology20052,725
7MAGMA: Generalized Gene-Set Analysis of GWAS DataPLoS Computational Biology20152,562
8mixOmics: An R package for ‘omics feature selection and multiple data integrationPLoS Computational Biology20172,493
9Waste Not, Want Not: Why Rarefying Microbiome Data Is InadmissiblePLoS Computational Biology20142,462
10Efficiency and Cost of Economical Brain Functional NetworksPLoS Computational Biology20072,173
11Inferring Correlation Networks from Genomic Survey DataPLoS Computational Biology20122,014
12OpenMM 7: Rapid development of high performance algorithms for molecular dynamicsPLoS Computational Biology20171,798
13Bayesian Phylogeography Finds Its RootsPLoS Computational Biology20091,578
14MUMmer4: A fast and versatile genome alignment systemPLoS Computational Biology20181,575
15MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing DataPLoS Computational Biology20161,564
16Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic SamplesPLoS Computational Biology20091,528
17Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++PLoS Computational Biology20101,492
18CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA SequencingPLoS Computational Biology20161,382
19Functional Brain Networks Develop from a “Local to Distributed” OrganizationPLoS Computational Biology20091,314
20Microbial Co-occurrence Relationships in the Human MicrobiomePLoS Computational Biology20121,313
21Ten Years of Pathway Analysis: Current Approaches and Outstanding ChallengesPLoS Computational Biology20121,305
22Sparse and Compositionally Robust Inference of Microbial Ecological NetworksPLoS Computational Biology20151,177
23Universally Sloppy Parameter Sensitivities in Systems Biology ModelsPLoS Computational Biology20071,051
24CAVER 3.0: A Tool for the Analysis of Transport Pathways in Dynamic Protein StructuresPLoS Computational Biology20121,046
25Network Analysis of Intrinsic Functional Brain Connectivity in Alzheimer's DiseasePLoS Computational Biology20081,012
26Simulation of the Undiseased Human Cardiac Ventricular Action Potential: Model Formulation and Experimental ValidationPLoS Computational Biology20111,002
27Chapter 11: Genome-Wide Association StudiesPLoS Computational Biology2012975
28Deep Supervised, but Not Unsupervised, Models May Explain IT Cortical RepresentationPLoS Computational Biology2014968
29Metabolic Reconstruction for Metagenomic Data and Its Application to the Human MicrobiomePLoS Computational Biology2012965
30Is My Network Module Preserved and Reproducible?PLoS Computational Biology2011920
31Multivariable association discovery in population-scale meta-omics studiesPLoS Computational Biology2021917
32ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial GenomesPLoS Computational Biology2015878
33The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression DynamicsPLoS Computational Biology2007866
34A Guild of 45 CRISPR-Associated (Cas) Protein Families and Multiple CRISPR/Cas Subtypes Exist in Prokaryotic GenomesPLoS Computational Biology2005856
35OpenSim: Simulating musculoskeletal dynamics and neuromuscular control to study human and animal movementPLoS Computational Biology2018826
36iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track CollectionsPLoS Computational Biology2014823
37An Abundance of Ubiquitously Expressed Genes Revealed by Tissue Transcriptome Sequence DataPLoS Computational Biology2009784
38Associating Genes and Protein Complexes with Disease via Network PropagationPLoS Computational Biology2010778
39A Toolbox for Representational Similarity AnalysisPLoS Computational Biology2014767
40A Systematic Assessment of MHC Class II Peptide Binding Predictions and Evaluation of a Consensus ApproachPLoS Computational Biology2008757
41Transcriptomics technologiesPLoS Computational Biology2017752
42Predicting Network Activity from High Throughput MetabolomicsPLoS Computational Biology2013747
43Geometric Interpretation of Gene Coexpression Network AnalysisPLoS Computational Biology2008738
44Structural Properties of the Caenorhabditis elegans Neuronal NetworkPLoS Computational Biology2011729
45Projecting social contact matrices in 152 countries using contact surveys and demographic dataPLoS Computational Biology2017709
46Deep Neural Networks Rival the Representation of Primate IT Cortex for Core Visual Object RecognitionPLoS Computational Biology2014707
47Prediction of Drug-Target Interactions and Drug Repositioning via Network-Based InferencePLoS Computational Biology2012696
48Properties of MHC Class I Presented Peptides That Enhance ImmunogenicityPLoS Computational Biology2013681
49Hierarchical Models in the BrainPLoS Computational Biology2008677
50Discovering Motifs in Ranked Lists of DNA SequencesPLoS Computational Biology2007647