| # | Title | Journal | Year | Citations |
|---|
|
| 1 | The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract | Proceedings of the National Academy of Sciences of the United States of America | 2002 | 883 |
| 2 | The role of reactive oxygen species on Plasmodium melanotic encapsulation in Anopheles gambiae | Proceedings of the National Academy of Sciences of the United States of America | 2003 | 291 |
| 3 | Genome expression analysis of Anopheles gambiae: Responses to injury, bacterial challenge, and malaria infection | Proceedings of the National Academy of Sciences of the United States of America | 2002 | 266 |
| 4 | An immune-responsive serpin, SRPN6, mediates mosquito defense against malaria parasites | Proceedings of the National Academy of Sciences of the United States of America | 2005 | 169 |
| 5 | proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes | Nucleic Acids Research | 2017 | 139 |
| 6 | Subspecies in the global human gut microbiome | Molecular Systems Biology | 2017 | 125 |
| 7 | Complex Genetic Interactions in a Quantitative Trait Locus | PLoS Genetics | 2006 | 119 |
| 8 | A Novel Binuclear [CuSMo] Cluster at the Active Site of Carbon Monoxide Dehydrogenase: Characterization by X-ray Absorption Spectroscopy† | Biochemistry | 2003 | 116 |
| 9 | Standardized description of scientific evidence using the Evidence Ontology (ECO) | Database: the Journal of Biological Databases and Curation | 2014 | 95 |
| 10 | Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems | Global Biogeochemical Cycles | 2019 | 80 |
| 11 | Gut microbiota differs between children with Inflammatory Bowel Disease and healthy siblings in taxonomic and functional composition: a metagenomic analysis | American Journal of Physiology - Renal Physiology | 2017 | 73 |
| 12 | Golgi-to-phagosome transport of acid sphingomyelinase and prosaposin is mediated by sortilin | Journal of Cell Science | 2010 | 72 |
| 13 | Mechanism of the Schiff Base Forming Fructose-1,6-bisphosphate Aldolase: Structural Analysis of Reaction Intermediates‡ | Biochemistry | 2005 | 62 |
| 14 | Antioxidant Amelioration of Dilated Cardiomyopathy Caused by Conditional Deletion of NEMO/IKKγ in Cardiomyocytes | Circulation Research | 2010 | 53 |
| 15 | Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems | ELife | 0 | 44 |
| 16 | Lineage Tracing and Single-Nucleus Multiomics Reveal Novel Features of Adaptive and Maladaptive Repair after Acute Kidney Injury | Journal of the American Society of Nephrology: JASN | 2023 | 42 |
| 17 | Involvement of Runx1 in the down-regulation of fetal liver kinase-1 expression during transition of endothelial cells to hematopoietic cells | Blood | 2005 | 41 |
| 18 | Caught Bending the A-Rule: Crystal Structures of Translesion DNA Synthesis with a Non-Natural Nucleotide | Biochemistry | 2007 | 41 |
| 19 | Mtt1 is a Upf1-like helicase that interacts with the translation termination factors and whose overexpression can modulate termination efficiency | Rna | 2000 | 39 |
| 20 | The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations | Database: the Journal of Biological Databases and Curation | 2015 | 38 |
| 21 | Induced conformational changes activate the peptidoglycan synthase PBP1B | Molecular Microbiology | 2018 | 36 |
| 22 | Inhibition of O-GlcNAc Transferase Renders Prostate Cancer Cells Dependent on CDK9 | Molecular Cancer Research | 2020 | 35 |
| 23 | The deletion of TonB-dependent receptor genes is part of the genome reduction process that occurs during adaptation ofPseudomonas aeruginosato the cystic fibrosis lung | Pathogens and Disease | 2014 | 32 |
| 24 | Structure, function and evolution of the Archaeal class I fructose-1,6-bisphosphate aldolase | Biochemical Society Transactions | 2004 | 31 |
| 25 | The transcriptional repressor Gfi1 prevents lupus autoimmunity by restraining TLR7 signaling | European Journal of Immunology | 2016 | 28 |
| 26 | BCG vaccination early in life does not improve COVID‐19 outcome of elderly populations, based on nationally reported data | Letters in Applied Microbiology | 2020 | 28 |
| 27 | A novel type of colistin resistance genes selected from random sequence space | PLoS Genetics | 2021 | 28 |
| 28 | The gene for staphylococcal protein A | Trends in Immunology | 1984 | 26 |
| 29 | Analysis of the Protein Domain and Domain Architecture Content in Fungi and Its Application in the Search of New Antifungal Targets | PLoS Computational Biology | 2014 | 26 |
| 30 | Structural Characterization of the Ribosomal P1A−P2B Protein Dimer by Small-Angle X-ray Scattering and NMR Spectroscopy | Biochemistry | 2007 | 25 |
| 31 | 'Isotopo' a database application for facile analysis and management of mass isotopomer data | Database: the Journal of Biological Databases and Curation | 2014 | 25 |
| 32 | Characterization of N‐Demethyllincosamide Methyltransferases LmbJ and CcbJ | ChemBioChem | 2013 | 23 |
| 33 | CDK9 Inhibition Induces a Metabolic Switch that Renders Prostate Cancer Cells Dependent on Fatty Acid Oxidation | Neoplasia | 2019 | 20 |
| 34 | Genomic Sequencing from Sputum for Tuberculosis Disease Diagnosis, Lineage Determination, and Drug Susceptibility Prediction | Journal of Clinical Microbiology | 2023 | 14 |
| 35 | Neisseria gonorrhoeae-derived outer membrane vesicles package β-lactamases to promote antibiotic resistance | MicroLife | 2022 | 12 |
| 36 | Design, Synthesis, and Evaluation of N-Acyl Modified Sialic Acids as Inhibitors of Adenoviruses Causing Epidemic Keratoconjunctivitis | Journal of Medicinal Chemistry | 2009 | 11 |
| 37 | Targeted mutagenesis of multiple chromosomal regions in microbes | Current Opinion in Microbiology | 2020 | 10 |
| 38 | CD4+ T cell immunity to Salmonella is transient in the circulation | PLoS Pathogens | 2021 | 6 |
| 39 | Ocean-wide comparisons of mesopelagic planktonic community structures | ISME Communications | 2023 | 3 |
| 40 | Genetic Manipulation of a CAST of Characters in a Microbial Community | CRISPR Journal | 2022 | 1 |
| 41 | Revision of the genus Robbea (Stilbonematinae: Desmodoridae), worldwide abundant marine nematodes with chromophoric Fe–Br inclusions and the description of a new stilbonematine genus | Zoological Journal of the Linnean Society | 0 | 1 |
| 42 | Drug resistance prediction for Mycobacterium tuberculosis with reference graphs | Microbial Genomics | 2023 | 0 |
| 43 | Pleiotropic hubs drive bacterial surface competition through parallel changes in colony composition and expansion | PLoS Biology | 2023 | 0 |
| 44 | Construction of recombinant DNA molecules | | 2000 | 0 |
