| # | Title | Journal | Year | Citations |
|---|
| 1 | Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) | Autophagy | 2016 | 4,701 |
| 2 | Guidelines for the use and interpretation of assays for monitoring autophagy | Autophagy | 2012 | 3,122 |
| 3 | A new influenza virus virulence determinant: The NS1 protein four C-terminal residues modulate pathogenicity | Proceedings of the National Academy of Sciences of the United States of America | 2008 | 375 |
| 4 | Amino Acid 226 in the Hemagglutinin of H9N2 Influenza Viruses Determines Cell Tropism and Replication in Human Airway Epithelial Cells | Journal of Virology | 2007 | 251 |
| 5 | Replication and Transmission of H9N2 Influenza Viruses in Ferrets: Evaluation of Pandemic Potential | PLoS ONE | 2008 | 248 |
| 6 | Noise-induced stress response and hearing loss in goldfish (Carassius auratus) | Journal of Experimental Biology | 2004 | 239 |
| 7 | Responsiveness to a pandemic alert: use of reverse genetics for rapid development of influenza vaccines | Lancet, The | 2004 | 236 |
| 8 | Aging: Central role for autophagy and the lysosomal degradative system | Ageing Research Reviews | 2009 | 216 |
| 9 | Virulence-Associated Substitution D222G in the Hemagglutinin of 2009 Pandemic Influenza A(H1N1) Virus Affects Receptor Binding | Journal of Virology | 2010 | 197 |
| 10 | Effects of density and perch availability on the immune status of broilers | Poultry Science | 2002 | 184 |
| 11 | A video-based movement analysis system to quantify behavioral stress responses of fish | Water Research | 2004 | 172 |
| 12 | Quail carry sialic acid receptors compatible with binding of avian and human influenza viruses | Virology | 2006 | 162 |
| 13 | Coronavirus Immunoreactivity in Individuals With a Recent Onset of Psychotic Symptoms | Schizophrenia Bulletin | 2011 | 156 |
| 14 | Inefficient Control of Host Gene Expression by the 2009 Pandemic H1N1 Influenza A Virus NS1 Protein | Journal of Virology | 2010 | 152 |
| 15 | Enteroviruses Harness the Cellular Endocytic Machinery to Remodel the Host Cell Cholesterol Landscape for Effective Viral Replication | Cell Host and Microbe | 2013 | 128 |
| 16 | Introduction of Virulence Markers in PB2 of Pandemic Swine-Origin Influenza Virus Does Not Result in Enhanced Virulence or Transmission | Journal of Virology | 2010 | 126 |
| 17 | Differential Contribution of PB1-F2 to the Virulence of Highly Pathogenic H5N1 Influenza A Virus in Mammalian and Avian Species | PLoS Pathogens | 2011 | 119 |
| 18 | BosR (BB0647) governs virulence expression in Borrelia burgdorferi | Molecular Microbiology | 2009 | 117 |
| 19 | Compatibility of H9N2 avian influenza surface genes and 2009 pandemic H1N1 internal genes for transmission in the ferret model | Proceedings of the National Academy of Sciences of the United States of America | 2011 | 117 |
| 20 | Evidence of Expanded Host Range and Mammalian-Associated Genetic Changes in a Duck H9N2 Influenza Virus Following Adaptation in Quail and Chickens | PLoS ONE | 2008 | 116 |
| 21 | Interactions between Borrelia burgdorferi and ticks | Nature Reviews Microbiology | 2020 | 112 |
| 22 | Porcine reproductive and respiratory syndrome (PRRS): an immune dysregulatory pandemic | Immunologic Research | 2014 | 110 |
| 23 | Infection-derived lipids elicit an immune deficiency circuit in arthropods | Nature Communications | 2017 | 103 |
| 24 | Acoustical stress and hearing sensitivity in fishes: does the linear threshold shift hypothesis hold water? | Journal of Experimental Biology | 2004 | 102 |
| 25 | Drug Screening for Autophagy Inhibitors Based on the Dissociation of Beclin1-Bcl2 Complex Using BiFC Technique and Mechanism of Eugenol on Anti-Influenza A Virus Activity | PLoS ONE | 2013 | 91 |
| 26 | The Hybrid Histidine Kinase Hk1 Is Part of a Two-Component System That Is Essential for Survival of Borrelia burgdorferi in Feeding Ixodes scapularis Ticks | Infection and Immunity | 2011 | 88 |
| 27 | Modifications in the Polymerase Genes of a Swine-Like Triple-Reassortant Influenza Virus To Generate Live Attenuated Vaccines against 2009 Pandemic H1N1 Viruses | Journal of Virology | 2011 | 85 |
| 28 | A New Generation of Modified Live-Attenuated Avian Influenza Viruses Using a Two-Strategy Combination as Potential Vaccine Candidates | Journal of Virology | 2007 | 84 |
| 29 | Novel Reassortant Human-Like H3N2 and H3N1 Influenza A Viruses Detected in Pigs Are Virulent and Antigenically Distinct from Swine Viruses Endemic to the United States | Journal of Virology | 2015 | 84 |
| 30 | Influenza A and B Virus Intertypic Reassortment through Compatible Viral Packaging Signals | Journal of Virology | 2014 | 83 |
| 31 | Characterization of influenza virus sialic acid receptors in minor poultry species | Virology Journal | 2010 | 81 |
| 32 | Borrelia burgdorferi basic membrane proteins A and B participate in the genesis of Lyme arthritis | Journal of Experimental Medicine | 2008 | 78 |
| 33 | MicroRNA-based strategy to mitigate the risk of gain-of-function influenza studies | Nature Biotechnology | 2013 | 77 |
| 34 | mRNA vaccination induces tick resistance and prevents transmission of the Lyme disease agent | Science Translational Medicine | 2021 | 71 |
| 35 | Amino Acid 316 of Hemagglutinin and the Neuraminidase Stalk Length Influence Virulence of H9N2 Influenza Virus in Chickens and Mice | Journal of Virology | 2013 | 70 |
| 36 | Immunity-related genes in Ixodes scapularis—perspectives from genome information | Frontiers in Cellular and Infection Microbiology | 2014 | 68 |
| 37 | Antibody-Based Immunotherapy To Treat and Prevent Infection with Hypervirulent Klebsiella pneumoniae | Vaccine Journal | 2017 | 66 |
| 38 | CD14 cooperates with complement receptor 3 to mediate MyD88-independent phagocytosis ofBorrelia burgdorferi | Proceedings of the National Academy of Sciences of the United States of America | 2012 | 64 |
| 39 | Activation of the RpoN-RpoS regulatory pathway during the enzootic life cycle of Borrelia burgdorferi | BMC Microbiology | 2012 | 64 |
| 40 | A Simplified Method for Isolating Highly Purified Neurons, Oligodendrocytes, Astrocytes, and Microglia from the Same Human Fetal Brain Tissue | Neurochemical Research | 2007 | 63 |
| 41 | Study of the Response Regulator Rrp1 Reveals Its Regulatory Role in Chitobiose Utilization and Virulence of Borrelia burgdorferi | Infection and Immunity | 2013 | 63 |
| 42 | A Chromosomally Encoded Virulence Factor Protects the Lyme Disease Pathogen against Host-Adaptive Immunity | PLoS Pathogens | 2009 | 62 |
| 43 | Borrelia burgdorferi Needs Chemotaxis To Establish Infection in Mammals and To Accomplish Its Enzootic Cycle | Infection and Immunity | 2012 | 62 |
| 44 | Borrelia burgdorferi Complement Regulator-Acquiring Surface Protein 2 Does Not Contribute to Complement Resistance or Host Infectivity | PLoS ONE | 2008 | 59 |
| 45 | Role of Host Cell Secretory Machinery in Zika Virus Life Cycle | Viruses | 2018 | 59 |
| 46 | Anti-influenza A virus activity of rhein through regulating oxidative stress, TLR4, Akt, MAPK, and NF-κB signal pathways | PLoS ONE | 2018 | 59 |
| 47 | Comparative Proteomics Reveals Strain-Specific β-TrCP Degradation via Rotavirus NSP1 Hijacking a Host Cullin-3-Rbx1 Complex | PLoS Pathogens | 2016 | 59 |
| 48 | Autophagy in aging and in neurodegenerative disorders | Hormones | 2008 | 58 |
| 49 | Pause on Avian Flu Transmission Research | Science | 2012 | 58 |
| 50 | A Surface Enolase Participates in Borrelia burgdorferi-Plasminogen Interaction and Contributes to Pathogen Survival within Feeding Ticks | Infection and Immunity | 2012 | 57 |
