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exaly
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School of Computer Science
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top-articles
School of Computer Science
974
(top 1%)
papers
42.2K
(top 0.1%)
citations
91
(top 0.1%)
h
-index
180
(top 0.1%)
g
-index
1.2K
all documents
48.7K
doc citations
4.7K
citing journals
Top Articles
#
Title
Journal
Year
Citations
1
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
BMC Bioinformatics
2009
3,032
2
PatchDock and SymmDock: servers for rigid and symmetric docking
Nucleic Acids Research
2005
2,610
3
Principles of docking: An overview of search algorithms and a guide to scoring functions
Proteins: Structure, Function and Bioinformatics
2002
1,130
4
Identifying Personal Genomes by Surname Inference
Science
2013
936
5
Network‐based prediction of protein function
Molecular Systems Biology
2007
918
6
Associating Genes and Protein Complexes with Disease via Network Propagation
PLoS Computational Biology
2010
758
7
Computing and rendering point set surfaces
IEEE Transactions on Visualization and Computer Graphics
2003
742
8
FireDock: a web server for fast interaction refinement in molecular docking
Nucleic Acids Research
2008
657
9
Quantification of protein half-lives in the budding yeast proteome
Proceedings of the National Academy of Sciences of the United States of America
2006
623
10
FireDock: Fast interaction refinement in molecular docking
Proteins: Structure, Function and Bioinformatics
2007
607
11
Network-based prediction of human tissue-specific metabolism
Nature Biotechnology
2008
594
12
A Biologically Inspired System for Action Recognition
2007
530
13
Modeling cellular machinery through biological network comparison
Nature Biotechnology
2006
492
14
Regulatory on/off minimization of metabolic flux changes after genetic perturbations
Proceedings of the National Academy of Sciences of the United States of America
2005
427
15
A Survey on Shape Correspondence
Computer Graphics Forum
2011
419
16
Plasmonic nanostructure design and characterization via Deep Learning
Light: Science and Applications
2018
414
17
A method for simultaneous alignment of multiple protein structures
Proteins: Structure, Function and Bioinformatics
2004
396
18
Discovering Local Structure in Gene Expression Data: The Order-Preserving Submatrix Problem
Journal of Computational Biology
2003
391
19
Mechanism of Two Classes of Cancer Mutations in the Phosphoinositide 3-Kinase Catalytic Subunit
Science
2007
364
20
Multiple diverse ligands binding at a single protein site: A matter of pre-existing populations
Protein Science
2009
364
21
Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
Proceedings of the National Academy of Sciences of the United States of America
2004
344
22
Protein Structure Fitting and Refinement Guided by Cryo-EM Density
Structure
2008
334
23
Regulatory networks define phenotypic classes of human stem cell lines
Nature
2008
321
24
Compact routing schemes
2001
310
25
Effective Unconstrained Face Recognition by Combining Multiple Descriptors and Learned Background Statistics
IEEE Transactions on Pattern Analysis and Machine Intelligence
2011
285
26
EXPANDER--an integrative program suite for microarray data analysis
BMC Bioinformatics
2005
283
27
Genome-Wide In Silico Identification of Transcriptional Regulators Controlling the Cell Cycle in Human Cells
Genome Research
2003
275
28
Cluster graph modification problems
Discrete Applied Mathematics
2004
274
29
How prevalent is functional alternative splicing in the human genome?
Trends in Genetics
2004
267
30
Identification of functional modules using network topology and high-throughput data
BMC Systems Biology
2007
267
31
Recognition of Functional Sites in Protein Structures
Journal of Molecular Biology
2004
257
32
A survey of visibility for walkthrough applications
IEEE Transactions on Visualization and Computer Graphics
2003
256
33
Conservation and evolvability in regulatory networks: The evolution of ribosomal regulation in yeast
Proceedings of the National Academy of Sciences of the United States of America
2005
244
34
Neural “Ignition”: Enhanced Activation Linked to Perceptual Awareness in Human Ventral Stream Visual Cortex
Neuron
2009
242
35
Taking geometry to its edge: Fast unbound rigid (and hinge-bent) docking
Proteins: Structure, Function and Bioinformatics
2003
238
36
Reconstruction of
Arabidopsis
metabolic network models accounting for subcellular compartmentalization and tissue-specificity
Proceedings of the National Academy of Sciences of the United States of America
2012
237
37
PharmaGist: a webserver for ligand-based pharmacophore detection
Nucleic Acids Research
2008
231
38
Characterization of displaced white matter by brain tumors using combined DTI and fMRI
NeuroImage
2006
226
39
Efficient Algorithms for Detecting Signaling Pathways in Protein Interaction Networks
Journal of Computational Biology
2006
225
40
Differential Representations for Mesh Processing
Computer Graphics Forum
2006
215
41
Large-scale reconstruction and phylogenetic analysis of metabolic environments
Proceedings of the National Academy of Sciences of the United States of America
2008
208
42
Space-time super-resolution
IEEE Transactions on Pattern Analysis and Machine Intelligence
2005
206
43
Facial Attractiveness: Beauty and the Machine
Neural Computation
2006
203
44
Comprehensive MicroRNA Profiling Reveals a Unique Human Embryonic Stem Cell Signature Dominated by a Single Seed Sequence
Stem Cells
2008
202
45
Medical Sequencing at the Extremes of Human Body Mass
American Journal of Human Genetics
2007
199
46
The evolution of modularity in bacterial metabolic networks
Proceedings of the National Academy of Sciences of the United States of America
2008
197
47
HingeProt: Automated prediction of hinges in protein structures
Proteins: Structure, Function and Bioinformatics
2008
195
48
Widespread functional connectivity and fMRI fluctuations in human visual cortex in the absence of visual stimulation
NeuroImage
2006
194
49
Computational characterization of B-cell epitopes
Molecular Immunology
2008
194
50
Principles of flexible protein–protein docking
Proteins: Structure, Function and Bioinformatics
2008
186
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