Department of Bioinformatics and Genetics

201(top 1%)

papers

6.4K(top 1%)

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41(top 1%)

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73(top 1%)

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247

all documents

8.3K

doc citations

978

citing journals

Top Articles

#	Title	Journal	Year	Citations
1	RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language	Systematic Biology	2016	538
2	Population Genomics Reveal Recent Speciation and Rapid Evolutionary Adaptation in Polar Bears	Cell	2014	363
3	Total-Evidence Dating under the Fossilized Birth–Death Process	Systematic Biology	2016	304
4	Ancient Wolf Genome Reveals an Early Divergence of Domestic Dog Ancestors and Admixture into High-Latitude Breeds	Current Biology	2015	270
5	Complete Genomes Reveal Signatures of Demographic and Genetic Declines in the Woolly Mammoth	Current Biology	2015	263
6	Dense sampling of bird diversity increases power of comparative genomics	Nature	2020	251
7	Million-year-old DNA sheds light on the genomic history of mammoths	Nature	2021	179
8	Quantifying Temporal Genomic Erosion in Endangered Species	Trends in Ecology and Evolution	2018	162
9	Origins and genetic legacy of prehistoric dogs	Science	2020	152
10	Taxonomy based on science is necessary for global conservation	PLoS Biology	2018	149
11	Genomic evidence of geographically widespread effect of gene flow from polar bears into brown bears	Molecular Ecology	2015	148
12	A comprehensive genomic history of extinct and living elephants	Proceedings of the National Academy of Sciences of the United States of America	2018	142
13	Phylogeny, Evolution and Classification of Gall Wasps: The Plot Thickens	PLoS ONE	2015	136
14	Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny	Nature	2019	135
15	Partial genomic survival of cave bears in living brown bears	Nature Ecology and Evolution	2018	132
16	Historical Genomes Reveal the Genomic Consequences of Recent Population Decline in Eastern Gorillas	Current Biology	2019	126
17	Closing the gap between rocks and clocks using total-evidence dating	Philosophical Transactions of the Royal Society B: Biological Sciences	2016	115
18	Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics	PeerJ	2019	111
19	Population genomics of the critically endangered kākāpō	Cell Genomics	2021	106
20	Evolution of complex symbiotic relationships in a morphologically derived family of lichen‐forming fungi	New Phytologist	2015	105
21	Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird‐of‐paradise	Molecular Ecology Resources	2021	103
22	Automated Taxonomic Identification of Insects with Expert-Level Accuracy Using Effective Feature Transfer from Convolutional Networks	Systematic Biology	2019	97
23	Index hopping on the Illumina HiseqX platform and its consequences for ancient DNA studies	Molecular Ecology Resources	2020	82
24	The Global Museum: natural history collections and the future of evolutionary science and public education	PeerJ	2020	81
25	Supermatrix phylogeny and biogeography of the Australasian Meliphagides radiation (Aves: Passeriformes)	Molecular Phylogenetics and Evolution	2017	77
26	Ancient genomes suggest the eastern Pontic-Caspian steppe as the source of western Iron Age nomads	Science Advances	2018	76
27	A Nonstationary Markov Model Detects Directional Evolution in Hymenopteran Morphology	Systematic Biology	2015	75
28	The evolution and changing ecology of the African hominid oral microbiome	Proceedings of the National Academy of Sciences of the United States of America	2021	74
29	The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics	BMC Genomics	2017	73
30	Holarctic genetic structure and range dynamics in the woolly mammoth	Proceedings of the Royal Society B: Biological Sciences	2013	72
31	Extended and Continuous Decline in Effective Population Size Results in Low Genomic Diversity in the World’s Rarest Hyena Species, the Brown Hyena	Molecular Biology and Evolution	2018	72
32	Near-complete phylogeny and taxonomic revision of the world’s babblers (Aves: Passeriformes)	Molecular Phylogenetics and Evolution	2019	72
33	New mitochondrial primers for metabarcoding of insects, designed and evaluated using in silico methods	Molecular Ecology Resources	2019	69
34	Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds	Nature Ecology and Evolution	2019	68
35	Establishing arthropod community composition using metabarcoding: Surprising inconsistencies between soil samples and preservative ethanol and homogenate from Malaise trap catches	Molecular Ecology Resources	2019	64
36	Endless Forams: >34,000 Modern Planktonic Foraminiferal Images for Taxonomic Training and Automated Species Recognition Using Convolutional Neural Networks	Paleoceanography and Paleoclimatology	2019	61
37	Arctic-adapted dogs emerged at the Pleistocene–Holocene transition	Science	2020	60
38	Inference of natural selection from ancient DNA	Evolution Letters	2020	58
39	Genetic turnovers and northern survival during the last glacial maximum in European brown bears	Ecology and Evolution	2019	56
40	Puma genomes from North and South America provide insights into the genomic consequences of inbreeding	Nature Communications	2019	55
41	Population genomics of grey wolves and wolf-like canids in North America	PLoS Genetics	2018	54
42	Genome-Based Sexing Provides Clues about Behavior and Social Structure in the Woolly Mammoth	Current Biology	2017	53
43	A mixed relaxed clock model	Philosophical Transactions of the Royal Society B: Biological Sciences	2016	48
44	Grey wolf genomic history reveals a dual ancestry of dogs	Nature	2022	48
45	A western route of prehistoric human migration from Africa into the Iberian Peninsula	Proceedings of the Royal Society B: Biological Sciences	2019	47
46	Phylogeny of the parasitic wasp subfamily Euphorinae (Braconidae) and evolution of its host preferences	Systematic Entomology	2015	46
47	The avian W chromosome is a refugium for endogenous retroviruses with likely effects on female-biased mutational load and genetic incompatibilities	Philosophical Transactions of the Royal Society B: Biological Sciences	2021	46
48	Synchronous genetic turnovers across Western Eurasia in Late Pleistocene collared lemmings	Global Change Biology	2016	45
49	Twenty-five thousand years of fluctuating selection on leopard complex spotting and congenital night blindness in horses	Philosophical Transactions of the Royal Society B: Biological Sciences	2015	43
50	Microbiome change by symbiotic invasion in lichens	Environmental Microbiology	2016	41

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