| # | Title | Journal | Year | Citations |
|---|
| 1 | Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 | Nature Biotechnology | 2019 | 11,167 |
| 2 | Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences | Nature Biotechnology | 2013 | 8,049 |
| 3 | Item-based collaborative filtering recommendation algorithms | Nature Biotechnology | 2001 | 5,782 |
| 4 | Top 10 algorithms in data mining | Knowledge and Information Systems | 2008 | 4,153 |
| 5 | The Treatment-Naive Microbiome in New-Onset Crohn’s Disease | Cell Host and Microbe | 2014 | 2,582 |
| 6 | The Genetic Landscape of a Cell | Science | 2010 | 1,937 |
| 7 | An algorithmic framework for performing collaborative filtering | Science | 1999 | 1,643 |
| 8 | Analysis of recommendation algorithms for e-commerce | Science | 2000 | 1,207 |
| 9 | Recommender systems in e-commerce | Science | 1999 | 1,056 |
| 10 | E-Commerce Recommendation Applications | Data Mining and Knowledge Discovery | 2001 | 1,056 |
| 11 | Data Preparation for Mining World Wide Web Browsing Patterns | Knowledge and Information Systems | 1999 | 1,010 |
| 12 | A global genetic interaction network maps a wiring diagram of cellular function | Science | 2016 | 979 |
| 13 | Peak SIV replication in resting memory CD4+ T cells depletes gut lamina propria CD4+ T cells | Nature | 2005 | 877 |
| 14 | Improving Wireless Sensor Network Lifetime through Power Aware Organization | Wireless Networks | 2005 | 724 |
| 15 | Detection and classification of vehicles | IEEE Transactions on Intelligent Transportation Systems | 2002 | 636 |
| 16 | American Gut: an Open Platform for Citizen Science Microbiome Research | MSystems | 2018 | 604 |
| 17 | Web mining: information and pattern discovery on the World Wide Web | MSystems | 0 | 599 |
| 18 | Glycerol monolaurate prevents mucosal SIV transmission | Nature | 2009 | 563 |
| 19 | An Algorithmic Framework for Performing Collaborative Filtering | ACM SIGIR Forum | 2017 | 556 |
| 20 | Multilevel hypergraph partitioning: applications in VLSI domain | IEEE Transactions on Very Large Scale Integration (VLSI) Systems | 1999 | 545 |
| 21 | Fast Underwater Image Enhancement for Improved Visual Perception | IEEE Robotics and Automation Letters | 2020 | 522 |
| 22 | An Empirical Analysis of Design Choices in Neighborhood-Based Collaborative Filtering Algorithms | Information Retrieval | 2002 | 515 |
| 23 | US Immigration Westernizes the Human Gut Microbiome | Cell | 2018 | 511 |
| 24 | Recommender systems: from algorithms to user experience | User Modeling and User-Adapted Interaction | 2012 | 508 |
| 25 | Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans | Cell Host and Microbe | 2019 | 441 |
| 26 | Search and pursuit-evasion in mobile robotics | Autonomous Robots | 2011 | 434 |
| 27 | Discovering colocation patterns from spatial data sets: a general approach | IEEE Transactions on Knowledge and Data Engineering | 2004 | 417 |
| 28 | Evaluation and Design of Genome-Wide CRISPR/SpCas9 Knockout Screens | G3: Genes, Genomes, Genetics | 2017 | 417 |
| 29 | Generative adversarial networks: introduction and outlook | IEEE/CAA Journal of Automatica Sinica | 2017 | 384 |
| 30 | Captivity humanizes the primate microbiome | Proceedings of the National Academy of Sciences of the United States of America | 2016 | 369 |
| 31 | Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing | Nature Biotechnology | 2012 | 365 |
| 32 | A Kalman Filter-Based Algorithm for IMU-Camera Calibration: Observability Analysis and Performance Evaluation | IEEE Transactions on Robotics | 2008 | 361 |
| 33 | Systematic exploration of essential yeast gene function with temperature-sensitive mutants | Nature Biotechnology | 2011 | 352 |
| 34 | Social Comparisons and Contributions to Online Communities: A Field Experiment on MovieLens | American Economic Review | 2010 | 351 |
| 35 | Sensor Planning for a Symbiotic UAV and UGV System for Precision Agriculture | IEEE Transactions on Robotics | 2016 | 339 |
| 36 | Stable Engraftment of Bifidobacterium longum AH1206 in the Human Gut Depends on Individualized Features of the Resident Microbiome | Cell Host and Microbe | 2016 | 337 |
| 37 | Chemotherapy‐driven dysbiosis in the intestinal microbiome | Alimentary Pharmacology and Therapeutics | 2015 | 334 |
| 38 | Iterative solution of linear systems in the 20th century | Journal of Computational and Applied Mathematics | 2000 | 333 |
| 39 | Grouping Web page references into transactions for mining World Wide Web browsing patterns | Journal of Computational and Applied Mathematics | 0 | 323 |
| 40 | Rethinking “Enterotypes” | Cell Host and Microbe | 2014 | 321 |
| 41 | Quantitative analysis of fitness and genetic interactions in yeast on a genome scale | Nature Methods | 2010 | 319 |
| 42 | Generalizing discriminant analysis using the generalized singular value decomposition | IEEE Transactions on Pattern Analysis and Machine Intelligence | 2004 | 305 |
| 43 | Evaluating the Information Content of Shallow Shotgun Metagenomics | MSystems | 2018 | 293 |
| 44 | Finding Frequent Patterns in a Large Sparse Graph* | Data Mining and Knowledge Discovery | 2005 | 285 |
| 45 | Principal Direction Divisive Partitioning | Data Mining and Knowledge Discovery | 1998 | 280 |
| 46 | Vision-Aided Inertial Navigation for Spacecraft Entry, Descent, and Landing | IEEE Transactions on Robotics | 2009 | 278 |
| 47 | LARS: A Location-Aware Recommender System | IEEE Transactions on Robotics | 2012 | 277 |
| 48 | A polynomial-time approximation scheme for the minimum-connected dominating set in ad hoc wireless networks | Networks | 2003 | 273 |
| 49 | Orthogonal Neighborhood Preserving Projections: A Projection-Based Dimensionality Reduction Technique | IEEE Transactions on Pattern Analysis and Machine Intelligence | 2007 | 263 |
| 50 | Silent Positioning in Underwater Acoustic Sensor Networks | IEEE Transactions on Vehicular Technology | 2008 | 248 |
