| # | Title | Journal | Year | Citations |
|---|
| 1 | Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) | Autophagy | 2016 | 4,701 |
| 2 | Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1 | Autophagy | 2021 | 1,430 |
| 3 | PAMPs and DAMPs: signal 0s that spur autophagy and immunity | Immunological Reviews | 2012 | 899 |
| 4 | Animal models for COVID-19 | Nature | 2020 | 705 |
| 5 | Airborne transmission of respiratory viruses | Science | 2021 | 693 |
| 6 | Synovial fibroblasts spread rheumatoid arthritis to unaffected joints | Nature Medicine | 2009 | 679 |
| 7 | Type III Interferons Produced by Human Placental Trophoblasts Confer Protection against Zika Virus Infection | Cell Host and Microbe | 2016 | 464 |
| 8 | Tuberculosis: What We Don’t Know Can, and Does, Hurt Us | Science | 2010 | 430 |
| 9 | Recent advances in arginine metabolism: roles and regulation of the arginases | British Journal of Pharmacology | 2009 | 422 |
| 10 | Human placental trophoblasts confer viral resistance to recipient cells | Proceedings of the National Academy of Sciences of the United States of America | 2013 | 398 |
| 11 | Expansion of the Clostridium perfringens toxin-based typing scheme | Anaerobe | 2018 | 365 |
| 12 | Molecular evolution of dengue viruses: Contributions of phylogenetics to understanding the history and epidemiology of the preeminent arboviral disease | Infection, Genetics and Evolution | 2009 | 354 |
| 13 | MicroRNA Regulation of RNA Virus Replication and Pathogenesis | Trends in Molecular Medicine | 2017 | 310 |
| 14 | Adenosine promotes alternative macrophage activationviaA2A and A2B receptors | FASEB Journal | 2012 | 306 |
| 15 | Microenvironments in Tuberculous Granulomas Are Delineated by Distinct Populations of Macrophage Subsets and Expression of Nitric Oxide Synthase and Arginase Isoforms | Journal of Immunology | 2013 | 292 |
| 16 | Antimicrobial peptides with selective antitumor mechanisms: prospect for anticancer applications | Oncotarget | 2017 | 273 |
| 17 | CAR-Engineered NK Cells Targeting Wild-Type EGFR and EGFRvIII Enhance Killing of Glioblastoma and Patient-Derived Glioblastoma Stem Cells | Scientific Reports | 2015 | 270 |
| 18 | The Coxsackievirus B 3Cpro Protease Cleaves MAVS and TRIF to Attenuate Host Type I Interferon and Apoptotic Signaling | PLoS Pathogens | 2011 | 249 |
| 19 | Ceftolozane-Tazobactam for the Treatment of Multidrug-Resistant Pseudomonas aeruginosa Infections: Clinical Effectiveness and Evolution of Resistance | Clinical Infectious Diseases | 2017 | 224 |
| 20 | Zebrafish chemical screening reveals an inhibitor of Dusp6 that expands cardiac cell lineages | Nature Chemical Biology | 2009 | 221 |
| 21 | Chicken TLR21 acts as a functional homologue to mammalian TLR9 in the recognition of CpG oligodeoxynucleotides | Molecular Immunology | 2009 | 219 |
| 22 | Yellow Fever: A Reemerging Threat | Clinics in Laboratory Medicine | 2010 | 210 |
| 23 | Sensing of COVID‐19 Antibodies in Seconds via Aerosol Jet Nanoprinted Reduced‐Graphene‐Oxide‐Coated 3D Electrodes | Advanced Materials | 2021 | 200 |
| 24 | Advances in Understanding the Complex Mechanisms of DNA Interstrand Cross-Link Repair | Cold Spring Harbor Perspectives in Biology | 2013 | 196 |
| 25 | Omicron variant (B.1.1.529) of SARS‐CoV‐2, a global urgent public health alert! | Journal of Medical Virology | 2022 | 169 |
| 26 | Wnt Signaling Regulates Hepatic Metabolism | Science Signaling | 2011 | 167 |
| 27 | Review: Placenta-specific microRNAs in exosomes – Good things come in nano-packages | Placenta | 2014 | 164 |
| 28 | Influenza Virus Infectivity Is Retained in Aerosols and Droplets Independent of Relative Humidity | Journal of Infectious Diseases | 2018 | 159 |
| 29 | Latent tuberculosis: what the host “sees”? | Immunologic Research | 2011 | 158 |
| 30 | West Nile Virus | Clinics in Laboratory Medicine | 2010 | 156 |
| 31 | Dengue and Zika viruses subvert reticulophagy by NS2B3-mediated cleavage of FAM134B | Autophagy | 2017 | 152 |
| 32 | Mechanisms of MAVS Regulation at the Mitochondrial Membrane | Journal of Molecular Biology | 2013 | 149 |
| 33 | Macrophage Polarization Drives Granuloma Outcome during Mycobacterium tuberculosis Infection | Infection and Immunity | 2015 | 149 |
| 34 | Mitochondrial‐derived reactive oxygen species (ROS) play a causal role in aging‐related intervertebral disc degeneration | Journal of Orthopaedic Research | 2013 | 148 |
| 35 | Circular DNA tumor viruses make circular RNAs | Proceedings of the National Academy of Sciences of the United States of America | 2018 | 146 |
| 36 | Interactome analysis identifies a new paralogue of XRCC4 in non-homologous end joining DNA repair pathway | Nature Communications | 2015 | 144 |
| 37 | A Viral RNA Structural Element Alters Host Recognition of Nonself RNA | Science | 2014 | 143 |
| 38 | “Of Mice and Menâ€: Arginine Metabolism in Macrophages | Frontiers in Immunology | 2014 | 141 |
| 39 | Immunology studies in non‐human primate models of tuberculosis | Immunological Reviews | 2015 | 140 |
| 40 | Effect of eculizumab on haemolysis‐associated nitric oxide depletion, dyspnoea, and measures of pulmonary hypertension in patients with paroxysmal nocturnal haemoglobinuria | British Journal of Haematology | 2010 | 137 |
| 41 | Gene therapy for pain: Results of a phase I clinical trial | Annals of Neurology | 2011 | 136 |
| 42 | SARS-CoV-2 growth, furin-cleavage-site adaptation and neutralization using serum from acutely infected hospitalized COVID-19 patients | Journal of General Virology | 2020 | 131 |
| 43 | MCPIP1 Endoribonuclease Activity Negatively Regulates Interleukin-17-Mediated Signaling and Inflammation | Immunity | 2015 | 125 |
| 44 | Early Changes by 18 Fluorodeoxyglucose Positron Emission Tomography Coregistered with Computed Tomography Predict Outcome after Mycobacterium tuberculosis Infection in Cynomolgus Macaques | Infection and Immunity | 2014 | 123 |
| 45 | Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae | Frontiers in Microbiology | 2016 | 120 |
| 46 | ROS-induced R loops trigger a transcription-coupled but BRCA1/2-independent homologous recombination pathway through CSB | Nature Communications | 2018 | 120 |
| 47 | The oxidative DNA lesions 8,5′‐cyclopurines accumulate with aging in a tissue‐specific manner | Aging Cell | 2012 | 117 |
| 48 | H5N1 VLP vaccine induced protection in ferrets against lethal challenge with highly pathogenic H5N1 influenza viruses | Vaccine | 2008 | 115 |
| 49 | Evolutionary pathways to antibiotic resistance are dependent upon environmental structure and bacterial lifestyle | ELife | 2019 | 115 |
| 50 | First-In-Class Small Molecule Inhibitors of the Single-Strand DNA Cytosine Deaminase APOBEC3G | ACS Chemical Biology | 2012 | 112 |
