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#	Title	Journal	Year	Citations
1	Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE	Science	2010	1,124
2	The UCSC Genome Browser database: update 2011	Nucleic Acids Research	2011	958
3	Elephant shark genome provides unique insights into gnathostome evolution	Nature	2014	689
4	The UCSC Genome Browser database: update 2010	Nucleic Acids Research	2010	537
5	The UCSC Known Genes	Bioinformatics	2006	462
6	The UCSC Genome Browser Database: update 2009	Nucleic Acids Research	2009	329
7	The UCSC Genome Browser database: extensions and updates 2011	Nucleic Acids Research	2012	294
8	The photonic integration of non-solid media using optofluidics	Nature Photonics	2011	275
9	ENCODE whole-genome data in the UCSC Genome Browser: update 2012	Nucleic Acids Research	2012	220
10	Hollow-core waveguide characterization by optically induced particle transport	Optics Letters	2008	205
11	Atomic spectroscopy on a chip	Nature Photonics	2007	175
12	Optofluidic waveguides: I. Concepts and implementations	Microfluidics and Nanofluidics	2008	175
13	ENCODE whole-genome data in the UCSC genome browser (2011 update)	Nucleic Acids Research	2011	164
14	Ultrafast magnetization dynamics in high perpendicular anisotropy [Co∕Pt]n multilayers	Journal of Applied Physics	2007	131
15	Optofluidic waveguides: II. Fabrication and structures	Microfluidics and Nanofluidics	2008	109
16	Optofluidic analysis system for amplification-free, direct detection of Ebola infection	Scientific Reports	2015	104
17	Single-molecule detection sensitivity using planar integrated optics on a chip	Optics Letters	2006	103
18	Differential Earth Mover's Distance with Its Applications to Visual Tracking	IEEE Transactions on Pattern Analysis and Machine Intelligence	2010	100
19	Slow light on a chip via atomic quantum state control	Nature Photonics	2010	95
20	Magnetodielectric effects at magnetic ordering transitions	Progress in Solid State Chemistry	2009	92
21	Multiplexed efficient on-chip sample preparation and sensitive amplification-free detection of Ebola virus	Biosensors and Bioelectronics	2017	91
22	Strongly coupled magnon–phonon dynamics in a single nanomagnet	Nature Communications	2019	89
23	Magneto-Optical Observation of Picosecond Dynamics of Single Nanomagnets	Nano Letters	2006	85
24	On-chip surface-enhanced Raman scattering detection using integrated liquid-core waveguides	Applied Physics Letters	2007	80
25	Shallow viscoplastic flow on an inclined plane	Journal of Fluid Mechanics	2002	77
26	Controlling nanomagnet magnetization dynamics via magnetoelastic coupling	Physical Review B	2014	58
27	Space-efficient gradual typing	Higher-Order and Symbolic Computation	2010	57
28	Acoustic control of magnetism toward energy-efficient applications	Applied Physics Reviews	2021	48
29	Optical characterization of arch-shaped ARROW waveguides with liquid cores	Optics Express	2005	47
30	Semantic Parametric Reshaping of Human Body Models		2014	47
31	Integration of programmable microfluidics and on-chip fluorescence detection for biosensing applications	Biomicrofluidics	2014	47
32	Ultrasensitive Qβ phage analysis using fluorescence correlation spectroscopy on an optofluidic chip	Biosensors and Bioelectronics	2009	44
33	Dynamics of cooling domes of viscoplastic fluid	Journal of Fluid Mechanics	2000	43
34	Microfluidic System for Detection of Viral RNA in Blood Using a Barcode Fluorescence Reporter and a Photocleavable Capture Probe	Analytical Chemistry	2017	41
35	Hollow ARROW Waveguides on Self-Aligned Pedestals for Improved Geometry and Transmission	IEEE Photonics Technology Letters	2010	40
36	Cavity-Enhanced Magnetooptical Observation of Magnetization Reversal in Individual Single-Domain Nanomagnets	Nano Letters	2005	36
37	Fabrication of hollow waveguides with sacrificial aluminum cores	IEEE Photonics Technology Letters	2005	34
38	Optimized piranha etching process for SU8-based MEMS and MOEMS construction	Journal of Micromechanics and Microengineering	2010	34
39	Effect of deposition pressure on the microstructure and thermoelectric properties of epitaxial ScN(001) thin films sputtered onto MgO(001) substrates	Journal of Materials Research	2015	34
40	Electro-plasmonic nanoantenna: A nonfluorescent optical probe for ultrasensitive label-free detection of electrophysiological signals	Science Advances	2019	33
41	Improving spike separation using waveform derivatives	Journal of Neural Engineering	2009	32
42	Effect of Fabrication-Dependent Shape and Composition of Solid-State Nanopores on Single Nanoparticle Detection	ACS Nano	2013	32
43	Optofluidic bioanalysis: fundamentals and applications	Nanophotonics	2017	31
44	Improving solid to hollow core transmission for integrated ARROW waveguides	Optics Express	2008	29
45	Are We There Yet? Comparing Remote Learning Technologies in the University Classroom	IEEE Robotics and Automation Letters	2020	29
46	Optofluidic particle concentration by a long-range dual-beam trap	Optics Letters	2009	26
47	Scalable Spatial-Spectral Multiplexing of Single-Virus Detection Using Multimode Interference Waveguides	Scientific Reports	2017	26
48	Multi-mode mitigation in an optofluidic chip for particle manipulation and sensing	Optics Express	2009	25
49	Integration of sample preparation and analysis into an optofluidic chip for multi-target disease detection	Lab on A Chip	2018	24
50	Recent advances in integrated solid-state nanopore sensors	Lab on A Chip	2021	24

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