| # | Title | Journal | Year | Citations |
|---|
| 1 | Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) | Autophagy | 2016 | 4,701 |
| 2 | The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray) | Science | 2006 | 3,945 |
| 3 | National Sleep Foundation’s sleep time duration recommendations: methodology and results summary | Sleep Health | 2015 | 2,675 |
| 4 | Abscisic Acid Inhibits Type 2C Protein Phosphatases via the PYR/PYL Family of START Proteins | Science | 2009 | 2,385 |
| 5 | An “Electronic Fluorescent Pictograph” Browser for Exploring and Analyzing Large-Scale Biological Data Sets | PLoS ONE | 2007 | 2,236 |
| 6 | Adherens junctions: from molecules to morphogenesis | Nature Reviews Molecular Cell Biology | 2010 | 799 |
| 7 | The transcriptional landscape of polyploid wheat | Science | 2018 | 768 |
| 8 | A reference map of the human binary protein interactome | Nature | 2020 | 724 |
| 9 | The developmental dynamics of the maize leaf transcriptome | Nature Genetics | 2010 | 660 |
| 10 | Disentangling Interactions in the Microbiome: A Network Perspective | Trends in Microbiology | 2017 | 559 |
| 11 | The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements | Genome Research | 2015 | 402 |
| 12 | Association of host genome with intestinal microbial composition in a large healthy cohort | Nature Genetics | 2016 | 388 |
| 13 | The Apical Polarity Protein Network in Drosophila Epithelial Cells: Regulation of Polarity, Junctions, Morphogenesis, Cell Growth, and Survival | Annual Review of Cell and Developmental Biology | 2012 | 325 |
| 14 | Single cell-derived clonal analysis of human glioblastoma links functional and genomic heterogeneity | Proceedings of the National Academy of Sciences of the United States of America | 2015 | 321 |
| 15 | Neurons Are Recruited to a Memory Trace Based on Relative Neuronal Excitability Immediately before Training | Neuron | 2014 | 319 |
| 16 | Lung microbiota across age and disease stage in cystic fibrosis | Scientific Reports | 2015 | 316 |
| 17 | NPS6, Encoding a Nonribosomal Peptide Synthetase Involved in Siderophore-Mediated Iron Metabolism, Is a Conserved Virulence Determinant of Plant Pathogenic Ascomycetes | Plant Cell | 2006 | 311 |
| 18 | Trait Variation in Yeast Is Defined by Population History | PLoS Genetics | 2011 | 311 |
| 19 | The roles of ABA in plant–pathogen interactions | Journal of Plant Research | 2011 | 305 |
| 20 | PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species | Plant Cell | 2011 | 297 |
| 21 | Next‐generation mapping of Arabidopsis genes | Plant Journal | 2011 | 284 |
| 22 | The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage | Genome Biology | 2013 | 276 |
| 23 | Overview of organohalide-respiring bacteria and a proposal for a classification system for reductive dehalogenases | Philosophical Transactions of the Royal Society B: Biological Sciences | 2013 | 266 |
| 24 | Activation of dimeric ABA receptors elicits guard cell closure, ABA-regulated gene expression, and drought tolerance | Proceedings of the National Academy of Sciences of the United States of America | 2013 | 262 |
| 25 | Cellular Pathways Regulating Responses to Compatible and Self-Incompatible Pollen inBrassicaandArabidopsisStigmas Intersect at Exo70A1, a Putative Component of the Exocyst Complex | Plant Cell | 2009 | 259 |
| 26 | Yeast Proteome Dynamics from Single Cell Imaging and Automated Analysis | Cell | 2015 | 254 |
| 27 | The diversity of plant U-box E3 ubiquitin ligases: from upstream activators to downstream target substrates | Journal of Experimental Botany | 2009 | 253 |
| 28 | S-nitrosylation triggers ABI5 degradation to promote seed germination and seedling growth | Nature Communications | 2015 | 251 |
| 29 | A Vacuolar Arsenite Transporter Necessary for Arsenic Tolerance in the Arsenic Hyperaccumulating Fern Pteris vittata Is Missing in Flowering Plants | Plant Cell | 2010 | 243 |
| 30 | Probing strigolactone receptors in Striga hermonthica with fluorescence | Science | 2015 | 230 |
| 31 | Feeding hungry plants: The role of purple acid phosphatases in phosphate nutrition | Plant Science | 2010 | 228 |
| 32 | Association of Exposure to Formula in the Hospital and Subsequent Infant Feeding Practices With Gut Microbiota and Risk of Overweight in the First Year of Life | JAMA Pediatrics | 2018 | 218 |
| 33 | Compact spheroid formation by ovarian cancer cells is associated with contractile behavior and an invasive phenotype | International Journal of Cancer | 2009 | 212 |
| 34 | Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions | Proceedings of the National Academy of Sciences of the United States of America | 2011 | 210 |
| 35 | A small-molecule screen identifies new functions for the plant hormone strigolactone | Nature Chemical Biology | 2010 | 207 |
| 36 | Thermoinhibition Uncovers a Role for Strigolactones in Arabidopsis Seed Germination | Plant and Cell Physiology | 2012 | 193 |
| 37 | Vacuolating Cytotoxin and Variants in Atg16L1 That Disrupt Autophagy Promote Helicobacter pylori Infection in Humans | Gastroenterology | 2012 | 190 |
| 38 | Sentinels at the wall: cell wall receptors and sensors | New Phytologist | 2007 | 189 |
| 39 | Behavioral effects of neuropeptides in rodent models of depression and anxiety | Peptides | 2010 | 185 |
| 40 | The Arabidopsis ZED1 pseudokinase is required for ZAR1-mediated immunity induced by the Pseudomonas syringae type III effector HopZ1a | Proceedings of the National Academy of Sciences of the United States of America | 2013 | 183 |
| 41 | The FERM Protein Yurt Is a Negative Regulatory Component of the Crumbs Complex that Controls Epithelial Polarity and Apical Membrane Size | Developmental Cell | 2006 | 180 |
| 42 | Cdc42 and Par proteins stabilize dynamic adherens junctions in the Drosophila neuroectoderm through regulation of apical endocytosis | Journal of Cell Biology | 2008 | 180 |
| 43 | Monomeric α-catenin links cadherin to the actin cytoskeleton | Nature Cell Biology | 2013 | 180 |
| 44 | Type III Effector Diversification via Both Pathoadaptation and Horizontal Transfer in Response to a Coevolutionary Arms Race | PLoS Genetics | 2006 | 179 |
| 45 | The Functions of the Endosperm During Seed Germination | Plant and Cell Physiology | 2014 | 179 |
| 46 | A Bacterial Acetyltransferase Destroys Plant Microtubule Networks and Blocks Secretion | PLoS Pathogens | 2012 | 178 |
| 47 | Shoaling develops with age in Zebrafish (Danio rerio) | Progress in Neuro-Psychopharmacology and Biological Psychiatry | 2011 | 176 |
| 48 | Bidirectional Control of Anxiety-Related Behaviors in Mice: Role of Inputs Arising from the Ventral Hippocampus to the Lateral Septum and Medial Prefrontal Cortex | Neuropsychopharmacology | 2017 | 171 |
| 49 | The PAR complex regulates pulsed actomyosin contractions during amnioserosa apical constriction in Drosophila | Development (Cambridge) | 2010 | 169 |
| 50 | A 3D culture model of innervated human skeletal muscle enables studies of the adult neuromuscular junction | ELife | 2019 | 169 |
