| # | Title | Journal | Year | Citations |
|---|
| 1 | Small RNAs in Bacteria and Archaea | Advances in Genetics | 2015 | 462 |
| 2 | The Dynamic Landscapes of RNA Architecture | Cell | 2009 | 303 |
| 3 | RNA-Puzzles: A CASP-like evaluation of RNA three-dimensional structure prediction | Rna | 2012 | 241 |
| 4 | The cspA mRNA Is a Thermosensor that Modulates Translation of the Cold-Shock Protein CspA | Molecular Cell | 2010 | 212 |
| 5 | Mutation of the Mitochondrial Tyrosyl-tRNA Synthetase Gene, YARS2, Causes Myopathy, Lactic Acidosis, and Sideroblastic Anemia—MLASA Syndrome | American Journal of Human Genetics | 2010 | 211 |
| 6 | Structure of mammalian eIF3 in the context of the 43S preinitiation complex | Nature | 2015 | 204 |
| 7 | An integrated, structure- and energy-based view of the genetic code | Nucleic Acids Research | 2016 | 203 |
| 8 | A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation | Nucleic Acids Research | 2009 | 200 |
| 9 | Degradation of Cellular miR-27 by a Novel, Highly Abundant Viral Transcript Is Important for Efficient Virus Replication In Vivo | PLoS Pathogens | 2012 | 179 |
| 10 | Assemble: an interactive graphical tool to analyze and build RNA architectures at the 2D and 3D levels | Bioinformatics | 2010 | 176 |
| 11 | RNA Structure: Advances and Assessment of 3D Structure Prediction | Annual Review of Biophysics | 2017 | 166 |
| 12 | RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures | Rna | 2015 | 161 |
| 13 | RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme | Rna | 2017 | 158 |
| 14 | RNA-Mediated Regulation in Pathogenic Bacteria | Cold Spring Harbor Perspectives in Medicine | 2013 | 157 |
| 15 | Staphylococcus aureus RNAIII and Its Regulon Link Quorum Sensing, Stress Responses, Metabolic Adaptation, and Regulation of Virulence Gene Expression | Annual Review of Microbiology | 2016 | 153 |
| 16 | The selenium to selenoprotein pathway in eukaryotes: More molecular partners than anticipated | Biochimica Et Biophysica Acta - General Subjects | 2009 | 151 |
| 17 | Escherichia coli Ribosomal Protein S1 Unfolds Structured mRNAs Onto the Ribosome for Active Translation Initiation | PLoS Biology | 2013 | 151 |
| 18 | A supramolecular assembly formed by influenza A virus genomic RNA segments | Nucleic Acids Research | 2012 | 149 |
| 19 | Protein analysis by dynamic light scattering: Methods and techniques for students | Biochemistry and Molecular Biology Education | 2012 | 147 |
| 20 | Structure of transfer RNAs: similarity and variability | Wiley Interdisciplinary Reviews RNA | 2012 | 139 |
| 21 | A synthetic nanomaterial for virus recognition produced by surface imprinting | Nature Communications | 2013 | 136 |
| 22 | Recent Advances in Mitochondrial Aminoacyl-tRNA Synthetases and Disease | Trends in Molecular Medicine | 2017 | 132 |
| 23 | Global Regulatory Functions of the Staphylococcus aureus Endoribonuclease III in Gene Expression | PLoS Genetics | 2012 | 128 |
| 24 | iSpinach: a fluorogenic RNA aptamer optimized forin vitroapplications | Nucleic Acids Research | 2016 | 126 |
| 25 | The Staphylococcus aureus RNome and Its Commitment to Virulence | PLoS Pathogens | 2011 | 123 |
| 26 | Base Pairing Interaction between 5′- and 3′-UTRs Controls icaR mRNA Translation in Staphylococcus aureus | PLoS Genetics | 2013 | 123 |
| 27 | Selective packaging of the influenza A genome and consequences for genetic reassortment | Trends in Microbiology | 2014 | 122 |
| 28 | Cartography of Methicillin-Resistant S. aureus Transcripts: Detection, Orientation and Temporal Expression during Growth Phase and Stress Conditions | PLoS ONE | 2010 | 119 |
| 29 | HIV-1 Vif binds to APOBEC3G mRNA and inhibits its translation | Nucleic Acids Research | 2010 | 118 |
| 30 | A functional sequence-specific interaction between influenza A virus genomic RNA segments | Proceedings of the National Academy of Sciences of the United States of America | 2013 | 116 |
| 31 | A Non-Coding RNA Promotes Bacterial Persistence and Decreases Virulence by Regulating a Regulator in Staphylococcus aureus | PLoS Pathogens | 2014 | 110 |
| 32 | Staphylococcus aureus RNAIII Binds to Two Distant Regions of coa mRNA to Arrest Translation and Promote mRNA Degradation | PLoS Pathogens | 2010 | 108 |
| 33 | Kaposi's Sarcoma Herpesvirus microRNAs Target Caspase 3 and Regulate Apoptosis | PLoS Pathogens | 2011 | 108 |
| 34 | Specific recognition of the HIV-1 genomic RNA by the Gag precursor | Nature Communications | 2014 | 103 |
| 35 | An in vitro network of intermolecular interactions between viral RNA segments of an avian H5N2 influenza A virus: comparison with a human H3N2 virus | Nucleic Acids Research | 2013 | 102 |
| 36 | Selenoprotein function and muscle disease | Biochimica Et Biophysica Acta - General Subjects | 2009 | 101 |
| 37 | The Canonical Helix of Urea Oligomers at Atomic Resolution: Insights Into Folding‐Induced Axial Organization | Angewandte Chemie - International Edition | 2010 | 100 |
| 38 | Structural insights into the translational infidelity mechanism | Nature Communications | 2015 | 100 |
| 39 | An overview of RNAs with regulatory functions in gram-positive bacteria | Cellular and Molecular Life Sciences | 2010 | 93 |
| 40 | Cap-Assisted Internal Initiation of Translation of Histone H4 | Molecular Cell | 2011 | 93 |
| 41 | Critical role of segment-specific packaging signals in genetic reassortment of influenza A viruses | Proceedings of the National Academy of Sciences of the United States of America | 2013 | 91 |
| 42 | miR-346 Controls Release of TNF-α Protein and Stability of Its mRNA in Rheumatoid Arthritis via Tristetraprolin Stabilization | PLoS ONE | 2011 | 87 |
| 43 | Structure and functional reselection of the Mango-III fluorogenic RNA aptamer | Nature Chemical Biology | 2019 | 83 |
| 44 | A quantitative RNA code for mRNA target selection by the germline fate determinant GLD-1 | EMBO Journal | 2011 | 81 |
| 45 | Yeast mitochondrial Gln-tRNAGln is generated by a GatFAB-mediated transamidation pathway involving Arc1p-controlled subcellular sorting of cytosolic GluRS | Genes and Development | 2009 | 80 |
| 46 | Sequence-based identification of 3D structural modules in RNA with RMDetect | Nature Methods | 2011 | 80 |
| 47 | The Life-Cycle of the HIV-1 Gag–RNA Complex | Viruses | 2016 | 80 |
| 48 | sRNA and mRNA turnover in Gram-positive bacteria | FEMS Microbiology Reviews | 2015 | 79 |
| 49 | A PNPase Dependent CRISPR System in Listeria | PLoS Genetics | 2014 | 76 |
| 50 | Interaction network linking the human H3N2 influenza A virus genomic RNA segments | Vaccine | 2012 | 74 |
