| # | Title | Journal | Year | Citations |
|---|
| 1 | Towards a unified paradigm for sequence‐based identification of fungi | Molecular Ecology | 2013 | 2,997 |
| 2 | New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities | FEMS Microbiology Ecology | 2012 | 1,568 |
| 3 | Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1 | Autophagy | 2021 | 1,430 |
| 4 | The Norway spruce genome sequence and conifer genome evolution | Nature | 2013 | 1,303 |
| 5 | Roots and Associated Fungi Drive Long-Term Carbon Sequestration in Boreal Forest | Science | 2013 | 1,130 |
| 6 | Soil bacterial networks are less stable under drought than fungal networks | Nature Communications | 2018 | 992 |
| 7 | Fungal community analysis by high‐throughput sequencing of amplified markers – a user's guide | New Phytologist | 2013 | 747 |
| 8 | A multi-species synthesis of physiological mechanisms in drought-induced tree mortality | Nature Ecology and Evolution | 2017 | 739 |
| 9 | Carbon sequestration is related to mycorrhizal fungal community shifts during long‐term succession in boreal forests | New Phytologist | 2015 | 477 |
| 10 | To die or not to die: early warnings of tree dieback in response to a severe drought | Journal of Ecology | 2015 | 433 |
| 11 | Agricultural diversification promotes multiple ecosystem services without compromising yield | Science Advances | 2020 | 405 |
| 12 | Genomics and Ecology of Novel N2O-Reducing Microorganisms | Trends in Microbiology | 2018 | 388 |
| 13 | FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles | Fungal Diversity | 2020 | 387 |
| 14 | A plant perspective on nitrogen cycling in the rhizosphere | Functional Ecology | 2019 | 292 |
| 15 | Tree Diversity Drives Forest Stand Resistance to Natural Disturbances | Current Forestry Reports | 2017 | 279 |
| 16 | Changes in fungal communities along a boreal forest soil fertility gradient | New Phytologist | 2015 | 258 |
| 17 | Ectomycorrhizal Cortinarius species participate in enzymatic oxidation of humus in northern forest ecosystems | New Phytologist | 2014 | 256 |
| 18 | Biodiversity and ecosystem functioning relations in European forests depend on environmental context | Ecology Letters | 2017 | 244 |
| 19 | The Plasmodiophora brassicae genome reveals insights in its life cycle and ancestry of chitin synthases | Scientific Reports | 2015 | 202 |
| 20 | Biotic homogenization can decrease landscape-scale forest multifunctionality | Proceedings of the National Academy of Sciences of the United States of America | 2016 | 196 |
| 21 | Shift in fungal communities and associated enzyme activities along an age gradient of managed Pinus sylvestris stands | ISME Journal | 2017 | 192 |
| 22 | Mycorrhizal and saprotrophic fungal guilds compete for the same organic substrates but affect decomposition differently | Functional Ecology | 2016 | 191 |
| 23 | Jack-of-all-trades effects drive biodiversity–ecosystem multifunctionality relationships in European forests | Nature Communications | 2016 | 185 |
| 24 | Dominant mycorrhizal association of trees alters carbon and nutrient cycling by selecting for microbial groups with distinct enzyme function | New Phytologist | 2017 | 173 |
| 25 | The effect of fungal pathogens on the water and carbon economy of trees: implications for drought‐induced mortality | New Phytologist | 2014 | 157 |
| 26 | Identifying the Active Microbiome Associated with Roots and Rhizosphere Soil of Oilseed Rape | Applied and Environmental Microbiology | 2017 | 141 |
| 27 | Below‐ground organic matter accumulation along a boreal forest fertility gradient relates to guild interaction within fungal communities | Ecology Letters | 2017 | 136 |
| 28 | Improving ITS sequence data for identification of plant pathogenic fungi | Fungal Diversity | 2014 | 123 |
| 29 | Different crop rotation systems as drivers of change in soil bacterial community structure and yield of rice, Oryza sativa | Biology and Fertility of Soils | 2012 | 121 |
| 30 | Increasing dominance of terrigenous organic matter in circumpolar freshwaters due to permafrost thaw | Limnology and Oceanography Letters | 2018 | 121 |
| 31 | Crop cover is more important than rotational diversity for soil multifunctionality and cereal yields in European cropping systems | Nature Food | 2021 | 120 |
| 32 | Phosphorus cycling in deciduous forest soil differs between stands dominated by ecto‐ and arbuscular mycorrhizal trees | New Phytologist | 2016 | 118 |
| 33 | Contrasting effects of ectomycorrhizal fungi on early and late stage decomposition in a boreal forest | ISME Journal | 2018 | 112 |
| 34 | Potential for re-emergence of wheat stem rust in the United Kingdom | Communications Biology | 2018 | 107 |
| 35 | Global diversity and taxonomy of the Inonotus linteus complex (Hymenochaetales, Basidiomycota): Sanghuangporus gen. nov., Tropicoporus excentrodendri and T. guanacastensis gen. et spp. nov., and 17 new combinations | Fungal Diversity | 2016 | 100 |
| 36 | Zearalenone detoxification by zearalenone hydrolase is important for the antagonistic ability of Clonostachys rosea against mycotoxigenic Fusarium graminearum | Fungal Biology | 2014 | 99 |
| 37 | Transcriptomic changes in the plant pathogenic fungus Rhizoctonia solani AG-3 in response to the antagonistic bacteria Serratia proteamaculans and Serratia plymuthica | BMC Genomics | 2015 | 97 |
| 38 | Non-denitrifying nitrous oxide-reducing bacteria - An effective N2O sink in soil | Soil Biology and Biochemistry | 2016 | 97 |
| 39 | Soil microclimate changes affect soil fungal communities in a Mediterranean pine forest | New Phytologist | 2018 | 97 |
| 40 | The mycoparasitic fungus Clonostachys rosea responds with both common and specific gene expression during interspecific interactions with fungal prey | Evolutionary Applications | 2018 | 96 |
| 41 | Relative abundance of denitrifying and DNRA bacteria and their activity determine nitrogen retention or loss in agricultural soil | Soil Biology and Biochemistry | 2018 | 96 |
| 42 | Retracing the routes of introduction of invasive species: the case of the Sirex noctilio woodwasp | Molecular Ecology | 2012 | 95 |
| 43 | Necrotrophic Mycoparasites and Their Genomes | Microbiology Spectrum | 2017 | 94 |
| 44 | Species associations during the succession of wood-inhabiting fungal communities | Fungal Ecology | 2014 | 91 |
| 45 | Habitat generalists and specialists in microbial communities across a terrestrial-freshwater gradient | Scientific Reports | 2016 | 91 |
| 46 | Races of Puccinia striiformis f. sp. tritici in the United States in 2011 and 2012 and Comparison with Races in 2010 | Plant Disease | 2016 | 89 |
| 47 | Climate change and disease in plant communities | PLoS Biology | 2020 | 87 |
| 48 | Friend or foe? Biological and ecological traits of the European ash dieback pathogen Hymenoscyphus fraxineus in its native environment | Scientific Reports | 2016 | 86 |
| 49 | When is it biological control? A framework of definitions, mechanisms, and classifications | Journal of Pest Science | 2021 | 86 |
| 50 | Identifying glycoside hydrolase family 18 genes in the mycoparasitic fungal species Clonostachys rosea | Microbiology (United Kingdom) | 2015 | 86 |
