| # | Title | Journal | Year | Citations |
|---|
| 1 | Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G+C-content biases. | Molecular Biology and Evolution | 1992 | 1,466 |
| 2 | The cell-surface proteoglycan Dally regulates Wingless signalling in Drosophila | Nature | 1999 | 377 |
| 3 | The Phototropin Family of Photoreceptors | Plant Cell | 2001 | 337 |
| 4 | GETDB, a database compiling expression patterns and molecular locations of a collection of gal4 enhancer traps | Genesis | 2002 | 292 |
| 5 | Possibility of N or P limitation for planktonic cladocerans: An experimental test | Limnology and Oceanography | 1992 | 274 |
| 6 | Male-Killing Wolbachia in Drosophila: A Temperature-Sensitive Trait With a Threshold Bacterial Density | Genetics | 2000 | 264 |
| 7 | The concentric structure of the developing gut is regulated by Sonic hedgehog derived from endodermal epithelium | Development (Cambridge) | 2000 | 254 |
| 8 | Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli | EMBO Journal | 2001 | 243 |
| 9 | Cell size and nucleoid organization of engineered Escherichia coli cells with a reduced genome | Molecular Microbiology | 2004 | 237 |
| 10 | Cell Culture on a Thermo-Responsive Polymer Surface | Nature Biotechnology | 1990 | 231 |
| 11 | Dally regulates Dpp morphogen gradient formation in theDrosophila wing | Development (Cambridge) | 2003 | 207 |
| 12 | Carbohydrate metabolism in the diapause egg of the silkworm, Bombyx mori—II | Journal of Insect Physiology | 1958 | 202 |
| 13 | A phytochrome from the fern Adiantum with features of the putative photoreceptor NPH1 | Proceedings of the National Academy of Sciences of the United States of America | 1998 | 198 |
| 14 | Dally regulates Dpp morphogen gradient formation by stabilizing Dpp on the cell surface | Developmental Biology | 2008 | 183 |
| 15 | Rhodopseudomonas sphaeroides forma sp. denitrificans, a denitrifying strain as a subspecies of Rhodopseudomonas sphaeroides | Archives of Microbiology | 1976 | 178 |
| 16 | Drosophila Nedd4 Regulates Endocytosis of Notch and Suppresses Its Ligand-Independent Activation | Current Biology | 2004 | 176 |
| 17 | Higher Activity of an Aldehyde Oxidase in the Auxin-Overproducing superroot1 Mutant ofArabidopsis thaliana1 | Plant Physiology | 1998 | 167 |
| 18 | Cryptochrome Light Signals Control Development to Suppress Auxin Sensitivity in the Moss Physcomitrella patens | Plant Cell | 2002 | 161 |
| 19 | Chloroflexus aggregans sp. nov., a Filamentous Phototrophic Bacterium Which Forms Dense Cell Aggregates by Active Gliding Movement | International Journal of Systematic Bacteriology | 1995 | 157 |
| 20 | Evolution of Pulmonate Gastropod Mitochondrial Genomes: Comparisons of Gene Organizations of Euhadra, Cepaea and Albinaria and Implications of Unusual tRNA Secondary Structures | Genetics | 1997 | 149 |
| 21 | Rapid isolation method of animal mitochondrial DNA by the alkaline lysis procedure | Biochemical Genetics | 1988 | 144 |
| 22 | The plasmid R64 thin pilus identified as a type IV pilus | Journal of Bacteriology | 1997 | 144 |
| 23 | Biochemistry and Cell Biology of Amphibian Metamorphosis with a Special Emphasis on the Mechanism of Removal of Larval Organs | International Review of Cytology | 1990 | 142 |
| 24 | Horizontal transfer of genes coding for the photosynthetic reaction centers of purple bacteria | Journal of Molecular Evolution | 1997 | 142 |
| 25 | Purification and Properties of Flavin- and Molybdenum-Containing Aldehyde Oxidase from Coleoptiles of Maize | Plant Physiology | 1996 | 140 |
| 26 | Region-specific expression of chickenSox2 in the developing gut and lung epithelium: Regulation by epithelial-mesenchymal interactions | | 1998 | 138 |
| 27 | Trehalose in the body fluid of the silkworm, Bombyx mori L. | Journal of Insect Physiology | 1963 | 136 |
| 28 | Spatially and temporally regulated expression of the LIM class homeobox gene Hrlim suggests multiple distinct functions in development of the ascidian, Halocynthia roretzi | Mechanisms of Development | 1995 | 136 |
| 29 | Ultrastructural changes in Chlamydomonas acidophila (Chlorophyta) induced by heavy metals and polyphosphate metabolism | FEMS Microbiology Ecology | 2003 | 134 |
| 30 | Horizontal Transfer of the Photosynthesis Gene Cluster and Operon Rearrangement in Purple Bacteria | Journal of Molecular Evolution | 2001 | 132 |
| 31 | The transfer region of IncI1 plasmid R64: similarities between R64 tra and Legionella icm/dot genes | Molecular Microbiology | 2002 | 129 |
| 32 | SKELETON FORMATION OF SEA URCHIN LARVAE | Embryologia | 1960 | 126 |
| 33 | FruA, a putative transcription factor essential for the development of Myxococcus xanthus | Molecular Microbiology | 1996 | 125 |
| 34 | Changes in antioxidative enzymes in cucumber cotyledons during natural senescence: comparison with those during dark-induced senescence | Physiologia Plantarum | 2000 | 125 |
| 35 | Quinones in chlorosomes of green sulfur bacteria and their role in the redox-dependent fluorescence studied in chlorosome-like bacteriochlorophyll c aggregates | Archives of Microbiology | 1997 | 123 |
| 36 | Purification and Properties of Dimethylsulfoxide Reductase Containing a Molybdenum Cofactor from a Photodenitrifier, Rhodopseudomonas sphaeroides f.s. denitrificans | Journal of Biochemistry | 1987 | 120 |
| 37 | Distribution of rhodoquinone in Rhodospirillaceae and its taxonomic implications. | Journal of General and Applied Microbiology | 1984 | 118 |
| 38 | Examination of four methods for measuring soil respiration | Applied Soil Ecology | 1997 | 118 |
| 39 | Rhodoferax fermentans gen. nov., sp. nov., a phototrophic purple nonsulfur bacterium previously referred to as the ?Rhodocyclus gelatinosus-like? group | Archives of Microbiology | 1991 | 116 |
| 40 | Hroth, an orthodenticle-related homeobox gene of the ascidian, Halocynthia roretzi: its expression and putative roles in the axis formation during embryogenesis | Mechanisms of Development | 1996 | 116 |
| 41 | Growth pattern ofAbies mariesii saplings under conditions of open-growth and suppression | Botanical Magazine | 1980 | 114 |
| 42 | Isoprenoid quinone composition in the classification of Rhodospirillaceae. | Journal of General and Applied Microbiology | 1984 | 113 |
| 43 | Drosophila Heparan Sulfate 6-O-Sulfotransferase (dHS6ST) Gene | Journal of Biological Chemistry | 2001 | 110 |
| 44 | Antenna Complexes from Green Photosynthetic Bacteria | Advances in Photosynthesis and Respiration | 2003 | 109 |
| 45 | Phototropism: mechanisms and ecological implications | Plant, Cell and Environment | 1990 | 107 |
| 46 | Expression of the labial group Hox gene HrHox-1 and its alteration induced by retinoic acid in development of the ascidian Halocynthia roretzi | Development (Cambridge) | 1995 | 107 |
| 47 | HpEts, an ets-related transcription factor implicated in primary mesenchyme cell differentiation in the sea urchin embryo | Mechanisms of Development | 1999 | 106 |
| 48 | Cytochrome Complex Essential for Photosynthetic Oxidation of both Thiosulfate and Sulfide in Rhodovulum sulfidophilum | Journal of Bacteriology | 2001 | 105 |
| 49 | Blue- and red-light action in photoorientation of chloroplasts in Adiantum protonemata | Planta | 1985 | 104 |
| 50 | The rate and pattern of nucleotide substitution in Drosophila mitochondrial DNA. | Molecular Biology and Evolution | 1992 | 104 |
