6.4(top 5%)
impact factor
717(top 20%)
papers
15.4K(top 10%)
citations
45(top 20%)
h-index
6.5(top 5%)
impact factor
852
all documents
19.8K
doc citations
109(top 10%)
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Top Articles

#TitleJournalYearCitations
1RDP4: Detection and analysis of recombination patterns in virus genomesVirus Evolution20152,621
2Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10Virus Evolution20182,401
3Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)Virus Evolution20161,638
4TreeTime: Maximum-likelihood phylodynamic analysisVirus Evolution2018883
5Assignment of epidemiological lineages in an emerging pandemic using the pangolin toolVirus Evolution2021774
6Temporal signal and the phylodynamic threshold of SARS-CoV-2Virus Evolution2020317
7Global patterns in coronavirus diversityVirus Evolution2017310
8RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasetsVirus Evolution2021257
9Editorial: A home for virology, ecology, epidemiology, and evolutionary biologyVirus Evolution2015242
10Antiviral drug resistance as an adaptive processVirus Evolution2016162
11Evaluation of NGS-based approaches for SARS-CoV-2 whole genome characterisationVirus Evolution2020124
12An emergent clade of SARS-CoV-2 linked to returned travellers from IranVirus Evolution2020119
13Scalable relaxed clock phylogenetic datingVirus Evolution2017116
14Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic casesVirus Evolution2016105
15Analysis of the virome associated to grapevine downy mildew lesions reveals new mycovirus lineagesVirus Evolution2020104
16Sequence-based taxonomic framework for the classification of uncultured single-stranded DNA viruses of the family GenomoviridaeVirus Evolution201793
17An antibody-escape estimator for mutations to the SARS-CoV-2 receptor-binding domainVirus Evolution202293
18The diversification of begomovirus populations is predominantly driven by mutational dynamicsVirus Evolution201792
19Cameroonian fruit bats harbor divergent viruses, including rotavirus H, bastroviruses, and picobirnaviruses using an alternative genetic codeVirus Evolution201890
20Impacts and shortcomings of genetic clustering methods for infectious disease outbreaksVirus Evolution201687
21In vivo mutation rates and the landscape of fitness costs of HIV-1Virus Evolution201785
22No evidence for distinct types in the evolution of SARS-CoV-2Virus Evolution202085
23Challenges in the analysis of viral metagenomesVirus Evolution201683
24Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomesVirus Evolution201683
25Cenote-Taker 2 democratizes virus discovery and sequence annotationVirus Evolution202182
26The virome from a collection of endomycorrhizal fungi reveals new viral taxa with unprecedented genome organizationVirus Evolution202081
27Emergence of norovirus strains: A tale of two genesVirus Evolution201977
28The origins and molecular evolution of SARS-CoV-2 lineage B.1.1.7 in the UKVirus Evolution202275
29The effects of sampling strategy on the quality of reconstruction of viral population dynamics using Bayesian skyline family coalescent methods: A simulation studyVirus Evolution201669
30The evolution, diversity, and host associations of rhabdovirusesVirus Evolution201568
31HIV-1 transmission between MSM and heterosexuals, and increasing proportions of circulating recombinant forms in the Nordic CountriesVirus Evolution201668
32Intra-host evolution during SARS-CoV-2 prolonged infectionVirus Evolution202168
33The virome of Drosophila suzukii, an invasive pest of soft fruitVirus Evolution201867
34Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiverVirus Evolution201864
35Viral coinfection is shaped by host ecology and virus–virus interactions across diverse microbial taxa and environmentsVirus Evolution201763
36Co-circulation of genetically distinct highly pathogenic avian influenza A clade 2.3.4.4 (H5N6) viruses in wild waterfowl and poultry in Europe and East Asia, 2017–18Virus Evolution201963
37Novel hepatitis D-like agents in vertebrates and invertebratesVirus Evolution201963
38The number of genes encoding repeat domain-containing proteins positively correlates with genome size in amoebal giant virusesVirus Evolution201861
39MERS-CoV recombination: implications about the reservoir and potential for adaptationVirus Evolution201660
40Host ecology determines the dispersal patterns of a plant virusVirus Evolution201559
41The global distribution ofBanana bunchy top virusreveals little evidence for frequent recent, human-mediated long distance dispersal eventsVirus Evolution201558
42Virome composition in marine fish revealed by meta-transcriptomicsVirus Evolution202158
43Role of the host restriction factor APOBEC3 on papillomavirus evolutionVirus Evolution201557
44The phylogenetics of the global population of potato virus Y and its necrogenic recombinantsVirus Evolution201757
45Viral invasion fitness across a continuum from lysis to latency†Virus Evolution201957
46Identification and characterization of Coronaviridae genomes from Vietnamese bats and rats based on conserved protein domainsVirus Evolution201856
47Interannual dynamics, diversity and evolution of the virome in Sclerotinia sclerotiorum from a single crop fieldVirus Evolution202156
48Elucidating the phylodynamics of endemic rabies virus in eastern Africa using whole-genome sequencingVirus Evolution201555
49Understanding the evolution and spread of chikungunya virus in the Americas using complete genome sequencesVirus Evolution201755
50Diverse and highly recombinant anelloviruses associated with Weddell seals in AntarcticaVirus Evolution201755