# | Title | Journal | Year | Citations |
---|
1 | Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison | Standards in Genomic Sciences | 2010 | 1,442 |
2 | Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs | Standards in Genomic Sciences | 2010 | 509 |
3 | Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy | Standards in Genomic Sciences | 2014 | 454 |
4 | The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4) | Standards in Genomic Sciences | 2015 | 287 |
5 | Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project | Standards in Genomic Sciences | 2010 | 228 |
6 | The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes | Standards in Genomic Sciences | 2009 | 218 |
7 | The Earth Microbiome Project: Meeting report of the “1st EMP meeting on sample selection and acquisition” at Argonne National Laboratory October 6th 2010. | Standards in Genomic Sciences | 2010 | 176 |
8 | VIROME: a standard operating procedure for analysis of viral metagenome sequences | Standards in Genomic Sciences | 2012 | 169 |
9 | The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4) | Standards in Genomic Sciences | 2016 | 161 |
10 | The IGS Standard Operating Procedure for Automated Prokaryotic Annotation | Standards in Genomic Sciences | 2011 | 127 |
11 | Large-scale contamination of microbial isolate genomes by Illumina PhiX control | Standards in Genomic Sciences | 2015 | 127 |
12 | Genome sequences published outside of Standards in Genomic Sciences, January – June 2011 | Standards in Genomic Sciences | 2011 | 122 |
13 | Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T) | Standards in Genomic Sciences | 2011 | 115 |
14 | The Pathway Tools Pathway Prediction Algorithm | Standards in Genomic Sciences | 2011 | 109 |
15 | Non-contiguous finished genome sequence and description of Anaerococcus senegalensis sp. nov. | Standards in Genomic Sciences | 2012 | 106 |
16 | Complete genome sequence of Kytococcus sedentarius type strain (541T) | Standards in Genomic Sciences | 2009 | 100 |
17 | Complete genome sequence of the Medicago microsymbiont Ensifer (Sinorhizobium) medicae strain WSM419 | Standards in Genomic Sciences | 2010 | 100 |
18 | Complete genome sequence of Odoribacter splanchnicus type strain (1651/6T) | Standards in Genomic Sciences | 2011 | 96 |
19 | Complete genome sequence of Liberibacter crescens BT-1 | Standards in Genomic Sciences | 2012 | 96 |
20 | Non contiguous-finished genome sequence and description of Peptoniphilus timonensis sp. nov. | Standards in Genomic Sciences | 2012 | 93 |
21 | Non-contiguous finished genome sequence and description of Alistipes timonensis sp. nov. | Standards in Genomic Sciences | 2012 | 89 |
22 | The complete genome sequence and analysis of a plasmid-bearing myxobacterial strain Myxococcus fulvus 124B02 (M 206081) | Standards in Genomic Sciences | 2016 | 83 |
23 | Meeting report: GenBank microbial genomic taxonomy workshop (12–13 May, 2015) | Standards in Genomic Sciences | 2016 | 81 |
24 | Genome sequences of Bacteria and Archaea published outside of Standards in Genomic Sciences, June – September 2011 | Standards in Genomic Sciences | 2011 | 80 |
25 | Genomic Encyclopedia of Type Strains, Phase I: The one thousand microbial genomes (KMG-I) project | Standards in Genomic Sciences | 2013 | 79 |
26 | First high quality draft genome sequence of a plant growth promoting and cold active enzyme producing psychrotrophic Arthrobacter agilis strain L77 | Standards in Genomic Sciences | 2016 | 78 |
27 | Complete genome sequence of “Enterobacter lignolyticus” SCF1 | Standards in Genomic Sciences | 2011 | 76 |
28 | Genome sequence and description of Aeromicrobium massiliense sp. nov. | Standards in Genomic Sciences | 2012 | 76 |
29 | Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae | Standards in Genomic Sciences | 2014 | 76 |
30 | Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034T) | Standards in Genomic Sciences | 2010 | 74 |
31 | Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains | Standards in Genomic Sciences | 2015 | 74 |
32 | Complete genome sequence of Thioalkalivibrio “sulfidophilus” HL-EbGr7 | Standards in Genomic Sciences | 2011 | 72 |
33 | Complete Genome sequence of Burkholderia phymatum STM815T, a broad host range and efficient nitrogen-fixing symbiont of Mimosa species | Standards in Genomic Sciences | 2014 | 71 |
34 | Complete genome sequence of Haliangium ochraceum type strain (SMP-2T) | Standards in Genomic Sciences | 2010 | 70 |
35 | Non-contiguous finished genome sequence and description of Clostridium senegalense sp. nov. | Standards in Genomic Sciences | 2012 | 70 |
36 | Non contiguous-finished genome sequence and description of Bacillus timonensis sp. nov. | Standards in Genomic Sciences | 2012 | 70 |
37 | Non-contiguous finished genome sequence and description of Herbaspirillum massiliense sp. nov. | Standards in Genomic Sciences | 2012 | 70 |
38 | Complete genome sequence of Desulfocapsa sulfexigens, a marine deltaproteobacterium specialized in disproportionating inorganic sulfur compounds | Standards in Genomic Sciences | 2013 | 69 |
39 | Non-contiguous finished genome sequence and description of Paenibacillus senegalensis sp. nov. | Standards in Genomic Sciences | 2012 | 66 |
40 | Non contiguous-finished genome sequence and description of Cellulomonas massiliensis sp. nov. | Standards in Genomic Sciences | 2012 | 66 |
41 | Non contiguous-finished genome sequence and description of Senegalemassilia anaerobia gen. nov., sp. nov. | Standards in Genomic Sciences | 2013 | 66 |
42 | Non contiguous-finished genome sequence and description of Enterobacter massiliensis sp. nov. | Standards in Genomic Sciences | 2013 | 66 |
43 | Complete genome sequence of endophytic nitrogen-fixing Klebsiella variicola strain DX120E | Standards in Genomic Sciences | 2015 | 66 |
44 | Complete genome sequence of Allochromatium vinosum DSM 180T | Standards in Genomic Sciences | 2011 | 65 |
45 | Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China | Standards in Genomic Sciences | 2015 | 65 |
46 | Standard operating procedure for computing pangenome trees | Standards in Genomic Sciences | 2010 | 64 |
47 | Non-contiguous finished genome sequence and description of Brevibacterium senegalense sp. nov. | Standards in Genomic Sciences | 2012 | 64 |
48 | Solving the Problem: Genome Annotation Standards before the Data Deluge | Standards in Genomic Sciences | 2011 | 61 |
49 | Genome sequence and description of Alistipes senegalensis sp. nov. | Standards in Genomic Sciences | 2012 | 61 |
50 | Complete genome sequence of Rhizobium leguminosarum bv trifolii strain WSM2304, an effective microsymbiont of the South American clover Trifolium polymorphum. | Standards in Genomic Sciences | 2010 | 60 |