# | Title | Journal | Year | Citations |
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1 | Improved binary PSO for feature selection using gene expression data | Computational Biology and Chemistry | 2008 | 485 |
2 | Quantitative methods for ecological network analysis | Computational Biology and Chemistry | 2004 | 446 |
3 | Comparing two K-category assignments by a K-category correlation coefficient | Computational Biology and Chemistry | 2004 | 411 |
4 | Gene selection from microarray data for cancer classification—a machine learning approach | Computational Biology and Chemistry | 2005 | 336 |
5 | Chaos enhanced grey wolf optimization wrapped ELM for diagnosis of paraquat-poisoned patients | Computational Biology and Chemistry | 2019 | 281 |
6 | Stochastic approaches for modelling in vivo reactions | Computational Biology and Chemistry | 2004 | 273 |
7 | Stable feature selection for biomarker discovery | Computational Biology and Chemistry | 2010 | 251 |
8 | A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction | Computational Biology and Chemistry | 2010 | 191 |
9 | Genetic Bee Colony (GBC) algorithm: A new gene selection method for microarray cancer classification | Computational Biology and Chemistry | 2015 | 175 |
10 | Computational identification of microRNAs and their targets | Computational Biology and Chemistry | 2006 | 164 |
11 | Three-dimensional protein structure prediction: Methods and computational strategies | Computational Biology and Chemistry | 2014 | 160 |
12 | Molecular docking studies, charge transfer excitation and wave function analyses (ESP, ELF, LOL) on valacyclovir : A potential antiviral drug | Computational Biology and Chemistry | 2019 | 159 |
13 | MASIC: A software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC–MS(/MS) features | Computational Biology and Chemistry | 2008 | 154 |
14 | A local average connectivity-based method for identifying essential proteins from the network level | Computational Biology and Chemistry | 2011 | 152 |
15 | The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior | Computational Biology and Chemistry | 2006 | 145 |
16 | Potential drug targets in Mycobacterium tuberculosis through metabolic pathway analysis | Computational Biology and Chemistry | 2005 | 144 |
17 | Graphs with maximum connectivity index | Computational Biology and Chemistry | 2003 | 138 |
18 | Designing an efficient multi-epitope peptide vaccine against Vibrio cholerae via combined immunoinformatics and protein interaction based approaches | Computational Biology and Chemistry | 2016 | 136 |
19 | Automated annotation of microbial proteomes in SWISS-PROT | Computational Biology and Chemistry | 2003 | 125 |
20 | Ribosome kinetics and aa-tRNA competition determine rate and fidelity of peptide synthesis | Computational Biology and Chemistry | 2007 | 123 |
21 | Docking techniques in pharmacology: How much promising? | Computational Biology and Chemistry | 2018 | 117 |
22 | Hybrid particle swarm optimization and tabu search approach for selecting genes for tumor classification using gene expression data | Computational Biology and Chemistry | 2008 | 113 |
23 | In silico analysis of cis-acting regulatory elements in 5′ regulatory regions of sucrose transporter gene families in rice (Oryza sativa Japonica) and Arabidopsis thaliana | Computational Biology and Chemistry | 2010 | 111 |
24 | Protein family classification and functional annotation | Computational Biology and Chemistry | 2003 | 103 |
25 | Protein knots and fold complexity: Some new twists | Computational Biology and Chemistry | 2007 | 103 |
26 | Overlapping genes in vertebrate genomes | Computational Biology and Chemistry | 2005 | 100 |
27 | Design, synthesis, antimicrobial activity and computational studies of novel azo linked substituted benzimidazole, benzoxazole and benzothiazole derivatives | Computational Biology and Chemistry | 2019 | 98 |
28 | A comprehensive application: Molecular docking and network pharmacology for the prediction of bioactive constituents and elucidation of mechanisms of action in component-based Chinese medicine | Computational Biology and Chemistry | 2021 | 98 |
29 | A fundamental study of the PCR amplification of GC-rich DNA templates | Computational Biology and Chemistry | 2008 | 96 |
30 | Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths | Computational Biology and Chemistry | 2018 | 96 |
31 | Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea | Computational Biology and Chemistry | 2004 | 94 |
32 | Network-based approach to identify molecular signatures and therapeutic agents in Alzheimer’s disease | Computational Biology and Chemistry | 2019 | 92 |
33 | Predicting drug-target interaction network using deep learning model | Computational Biology and Chemistry | 2019 | 89 |
34 | The iProClass integrated database for protein functional analysis | Computational Biology and Chemistry | 2004 | 86 |
35 | Computational identification of 48 potato microRNAs and their targets | Computational Biology and Chemistry | 2009 | 86 |
36 | Predicting O-glycosylation sites in mammalian proteins by using SVMs | Computational Biology and Chemistry | 2006 | 83 |
37 | Multi-class tumor classification by discriminant partial least squares using microarray gene expression data and assessment of classification models | Computational Biology and Chemistry | 2004 | 79 |
38 | Predicting melting temperature directly from protein sequences | Computational Biology and Chemistry | 2009 | 79 |
39 | Circular code motifs in transfer and 16S ribosomal RNAs: A possible translation code in genes | Computational Biology and Chemistry | 2012 | 79 |
40 | Geo-Measures: A PyMOL plugin for protein structure ensembles analysis | Computational Biology and Chemistry | 2020 | 78 |
41 | Supervised machine learning algorithms for protein structure classification | Computational Biology and Chemistry | 2009 | 77 |
42 | Spectroscopic elucidation (FT-IR, FT-Raman and UV-visible) with NBO, NLO, ELF, LOL, drug likeness and molecular docking analysis on 1-(2-ethylsulfonylethyl)-2-methyl-5-nitro-imidazole: An antiprotozoal agent | Computational Biology and Chemistry | 2020 | 77 |
43 | Workflow based framework for life science informatics | Computational Biology and Chemistry | 2007 | 76 |
44 | TMBETADISC-RBF: Discrimination of -barrel membrane proteins using RBF networks and PSSM profiles | Computational Biology and Chemistry | 2008 | 76 |
45 | Discrepancy between mRNA and protein abundance: Insight from information retrieval process in computers | Computational Biology and Chemistry | 2008 | 73 |
46 | Two-phase biomedical named entity recognition using CRFs | Computational Biology and Chemistry | 2009 | 70 |
47 | Global expression analysis of miRNA gene cluster and family based on isomiRs from deep sequencing data | Computational Biology and Chemistry | 2010 | 70 |
48 | Combined QSAR, molecular docking and molecular dynamics study on new Acetylcholinesterase and Butyrylcholinesterase inhibitors | Computational Biology and Chemistry | 2018 | 68 |
49 | Virtual screening of approved drugs as potential SARS-CoV-2 main protease inhibitors | Computational Biology and Chemistry | 2020 | 66 |
50 | Tuning hyperparameters of machine learning algorithms and deep neural networks using metaheuristics: A bioinformatics study on biomedical and biological cases | Computational Biology and Chemistry | 2022 | 66 |