IEEE/ACM Transactions on Computational Biology and Bioinformatics

3.4(top 10%)

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2.9K(top 10%)

papers

50.2K(top 10%)

citations

90(top 5%)

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3.5(top 10%)

impact factor

3.4K

all documents

54.6K

doc citations

136(top 10%)

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Top Articles

#	Title	Journal	Year	Citations
1	Biclustering algorithms for biological data analysis: a survey	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2004	1,588
2	Deep Learning Enables Accurate Diagnosis of Novel Coronavirus (COVID-19) With CT Images	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2021	531
3	A Survey on Filter Techniques for Feature Selection in Gene Expression Microarray Analysis	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2012	471
4	Supervised, Unsupervised, and Semi-Supervised Feature Selection: A Review on Gene Selection	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2016	415
5	XGBoost Model for Chronic Kidney Disease Diagnosis	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2020	376
6	GenomeTools: A Comprehensive Software Library for Efficient Processing of Structured Genome Annotations	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2013	353
7	Sequencing-by-hybridization revisited: the analog-spectrum proposal	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2004	316
8	Efficient Detection of Network Motifs	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2006	304
9	Multi-Objective Particle Swarm Optimization Approach for Cost-Based Feature Selection in Classification	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2017	287
10	Inferring MicroRNA-Disease Associations by Random Walk on a Heterogeneous Network with Multiple Data Sources	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2017	265
11	Identification of Essential Proteins Based on Edge Clustering Coefficient	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2012	254
12	A Deep Learning Network Approach to <italic>ab initio</italic> Protein Secondary Structure Prediction	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2015	254
13	Multiobjective Optimization in Bioinformatics and Computational Biology	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2007	243
14	Accurate Cancer Classification Using Expressions of Very Few Genes	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2007	238
15	Indexing Graphs for Path Queries with Applications in Genome Research	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2014	237
16	CNN-RNN Based Intelligent Recommendation for Online Medical Pre-Diagnosis Support	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2021	234
17	Drug-Target Interaction Prediction with Graph Regularized Matrix Factorization	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2017	224
18	Improved and Promising Identification of Human MicroRNAs by Incorporating a High-Quality Negative Set	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2014	207
19	Integrative Data Analysis of Multi-Platform Cancer Data with a Multimodal Deep Learning Approach	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2015	204
20	Multicategory Classification Using An Extreme Learning Machine for Microarray Gene Expression Cancer Diagnosis	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2007	202
21	Prediction and Validation of Disease Genes Using HeteSim Scores	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2017	199
22	A Multimodal Deep Neural Network for Human Breast Cancer Prognosis Prediction by Integrating Multi-Dimensional Data	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2019	195
23	Correlation between Gene Expression and GO Semantic Similarity	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2005	194
24	A Fast Hierarchical Clustering Algorithm for Functional Modules Discovery in Protein Interaction Networks	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2011	171
25	Fast Prediction of Protein Methylation Sites Using a Sequence-Based Feature Selection Technique	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2019	163
26	Predicting Essential Proteins Based on Weighted Degree Centrality	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2014	160
27	Attribute Clustering for Grouping, Selection, and Classification of Gene Expression Data	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2005	159
28	On Position-Specific Scoring Matrix for Protein Function Prediction	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2011	159
29	Early Diagnosis of Alzheimer's Disease Based on Resting-State Brain Networks and Deep Learning	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2019	157
30	A SAT-Based Algorithm for Finding Attractors in Synchronous Boolean Networks	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2011	156
31	Identifying Bacterial Virulent Proteins by Fusing a Set of Classifiers Based on Variants of Chou's Pseudo Amino Acid Composition and on Evolutionary Information	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2012	156
32	Simultaneous Identification of Duplications and Lateral Gene Transfers	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2011	155
33	Inference of Genetic Regulatory Networks with Recurrent Neural Network Models Using Particle Swarm Optimization	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2007	153
34	A Top-r Feature Selection Algorithm for Microarray Gene Expression Data	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2012	152
35	Predicting Hospital Readmission via Cost-Sensitive Deep Learning	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2018	152
36	Using uncorrelated discriminant analysis for tissue classification with gene expression data	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2004	146
37	Motif Search in Graphs: Application to Metabolic Networks	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2006	146
38	Incomplete Lineage Sorting: Consistent Phylogeny Estimation from Multiple Loci	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2010	146
39	EEG-Based Brain-Computer Interfaces (BCIs): A Survey of Recent Studies on Signal Sensing Technologies and Computational Intelligence Approaches and Their Applications	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2021	144
40	Classification of Alzheimer's Disease Using Whole Brain Hierarchical Network	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2018	142
41	A 1.375-Approximation Algorithm for Sorting by Transpositions	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2006	139
42	Phylogenetic networks: modeling, reconstructibility, and accuracy	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2004	135
43	Normalized Feature Vectors: A Novel Alignment-Free Sequence Comparison Method Based on the Numbers of Adjacent Amino Acids	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2013	135
44	Development of Two-Stage SVM-RFE Gene Selection Strategy for Microarray Expression Data Analysis	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2007	134
45	Predicting Hub Genes Associated with Cervical Cancer through Gene Co-Expression Networks	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2016	133
46	Identifying Sigma70 Promoters with Novel Pseudo Nucleotide Composition	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2019	132
47	Meta-Path Methods for Prioritizing Candidate Disease miRNAs	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2019	126
48	A Multiple-Filter-Multiple-Wrapper Approach to Gene Selection and Microarray Data Classification	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2010	125
49	Inferring Gene Regulatory Networks using Differential Evolution with Local Search Heuristics	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2007	123
50	Comparison of Tree-Child Phylogenetic Networks	IEEE/ACM Transactions on Computational Biology and Bioinformatics	2009	123

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