11.1(top 1%)
impact factor
3.7K(top 5%)
papers
353.3K(top 1%)
citations
255(top 1%)
h-index
11.3(top 2%)
extended IF
3.9K
all documents
400.0K
doc citations
410(top 1%)
g-index

Top Articles

#TitleJournalYearCitations
1Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platformsISME Journal20127,737
2An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaeaISME Journal20124,726
3Soil bacterial and fungal communities across a pH gradient in an arable soilISME Journal20103,306
4Exact sequence variants should replace operational taxonomic units in marker-gene data analysisISME Journal20172,536
5UniFrac: an effective distance metric for microbial community comparisonISME Journal20112,402
6Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic SeaISME Journal20112,342
7Using network analysis to explore co-occurrence patterns in soil microbial communitiesISME Journal20122,210
8Pyrosequencing enumerates and contrasts soil microbial diversityISME Journal20071,634
9dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replicationISME Journal20171,538
10Quantifying community assembly processes and identifying features that impose themISME Journal20131,522
11Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradientsISME Journal20121,488
12Dominant and diet-responsive groups of bacteria within the human colonic microbiotaISME Journal20111,399
13Stochastic and deterministic assembly processes in subsurface microbial communitiesISME Journal20121,323
14Rhizosphere microbiome assemblage is affected by plant developmentISME Journal20141,196
15Examining the global distribution of dominant archaeal populations in soilISME Journal20111,151
16Distinct soil microbial diversity under long-term organic and conventional farmingISME Journal20151,144
17Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomesISME Journal20131,081
18Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteersISME Journal20121,071
19Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip dataISME Journal20101,039
20Using the class 1 integron-integrase gene as a proxy for anthropogenic pollutionISME Journal20151,035
21Evidence for a core gut microbiota in the zebrafishISME Journal20111,034
22A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analysesISME Journal20091,023
23Plant host habitat and root exudates shape soil bacterial community structureISME Journal2008989
24454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plantsISME Journal2012988
25Metagenomic and network analysis reveal wide distribution and co-occurrence of environmental antibiotic resistance genesISME Journal2015982
26Defining seasonal marine microbial community dynamicsISME Journal2012966
27Where less may be more: how the rare biosphere pulls ecosystems stringsISME Journal2017935
28Microbial contributions to climate change through carbon cycle feedbacksISME Journal2008924
29Phylogenetic distribution of three pathways for propionate production within the human gut microbiotaISME Journal2014919
30Stress tolerance in plants via habitat-adapted symbiosisISME Journal2008918
31Long-term ecological impacts of antibiotic administration on the human intestinal microbiotaISME Journal2007913
32Interactions between gut microbiota, host genetics and diet relevant to development of metabolic syndromes in miceISME Journal2010880
33Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern ChinaISME Journal2016846
34Ruminococcus bromii is a keystone species for the degradation of resistant starch in the human colonISME Journal2012836
35Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencingISME Journal2012835
36Exploring the bovine rumen bacterial community from birth to adulthoodISME Journal2013830
37The subgingival microbiome in health and periodontitis and its relationship with community biomass and inflammationISME Journal2013827
38Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in rootsISME Journal2019797
39Responses of soil bacterial and fungal communities to extreme desiccation and rewettingISME Journal2013793
40Relative roles of niche and neutral processes in structuring a soil microbial communityISME Journal2010750
41Towards the definition of a core of microorganisms involved in anaerobic digestion of sludgeISME Journal2009746
42Active and total microbial communities in forest soil are largely different and highly stratified during decompositionISME Journal2012744
43Toward defining the autoimmune microbiome for type 1 diabetesISME Journal2011722
44Modulation of gut microbiota during probiotic-mediated attenuation of metabolic syndrome in high fat diet-fed miceISME Journal2015720
45Implications of streamlining theory for microbial ecologyISME Journal2014703
46Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host developmentISME Journal2016688
47Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and usesISME Journal2013686
48Disease-induced assemblage of a plant-beneficial bacterial consortiumISME Journal2018675
49Soil pH mediates the balance between stochastic and deterministic assembly of bacteriaISME Journal2018669
50Taxonomical and functional microbial community selection in soybean rhizosphereISME Journal2014664