| # | Title | Journal | Year | Citations |
|---|
| 1 | The revised Trypanosoma cruzi subspecific nomenclature: Rationale, epidemiological relevance and research applications | Infection, Genetics and Evolution | 2012 | 728 |
| 2 | Emergence of genomic diversity and recurrent mutations in SARS-CoV-2 | Infection, Genetics and Evolution | 2020 | 708 |
| 3 | Full-genome evolutionary analysis of the novel corona virus (2019-nCoV) rejects the hypothesis of emergence as a result of a recent recombination event | Infection, Genetics and Evolution | 2020 | 544 |
| 4 | The evolution of Staphylococcus aureus | Infection, Genetics and Evolution | 2008 | 539 |
| 5 | Genetic diversity and evolution of SARS-CoV-2 | Infection, Genetics and Evolution | 2020 | 498 |
| 6 | The origin, emergence and evolutionary genetics of dengue virus | Infection, Genetics and Evolution | 2003 | 496 |
| 7 | “Bird biting” mosquitoes and human disease: A review of the role of Culex pipiens complex mosquitoes in epidemiology | Infection, Genetics and Evolution | 2011 | 463 |
| 8 | Discrimination of all genotypes of Giardia duodenalis at the glutamate dehydrogenase locus using PCR-RFLP | Infection, Genetics and Evolution | 2004 | 454 |
| 9 | Babesia: A world emerging | Infection, Genetics and Evolution | 2012 | 436 |
| 10 | Correlating viral phenotypes with phylogeny: Accounting for phylogenetic uncertainty | Infection, Genetics and Evolution | 2008 | 408 |
| 11 | SITVITWEB – A publicly available international multimarker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology | Infection, Genetics and Evolution | 2012 | 380 |
| 12 | Astrovirus infections in humans and animals – Molecular biology, genetic diversity, and interspecies transmissions | Infection, Genetics and Evolution | 2011 | 358 |
| 13 | Molecular evolution of dengue viruses: Contributions of phylogenetics to understanding the history and epidemiology of the preeminent arboviral disease | Infection, Genetics and Evolution | 2009 | 354 |
| 14 | Picornavirus and enterovirus diversity with associated human diseases | Infection, Genetics and Evolution | 2013 | 341 |
| 15 | Newcastle disease: Evolution of genotypes and the related diagnostic challenges | Infection, Genetics and Evolution | 2010 | 330 |
| 16 | Salmonella typhi, the causative agent of typhoid fever, is approximately 50,000 years old | Infection, Genetics and Evolution | 2002 | 328 |
| 17 | Genetic diversity of avian paramyxovirus type 1: Proposal for a unified nomenclature and classification system of Newcastle disease virus genotypes | Infection, Genetics and Evolution | 2012 | 323 |
| 18 | Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: Performance evaluation of the new REGA version 3 and seven other tools | Infection, Genetics and Evolution | 2013 | 313 |
| 19 | Four years of DNA barcoding: Current advances and prospects | Infection, Genetics and Evolution | 2008 | 297 |
| 20 | S1 gene-based phylogeny of infectious bronchitis virus: An attempt to harmonize virus classification | Infection, Genetics and Evolution | 2016 | 296 |
| 21 | Anthrax molecular epidemiology and forensics: using the appropriate marker for different evolutionary scales | Infection, Genetics and Evolution | 2004 | 295 |
| 22 | Durable resistance: A key to sustainable management of pathogens and pests | Infection, Genetics and Evolution | 2014 | 280 |
| 23 | Recombination in viruses: Mechanisms, methods of study, and evolutionary consequences | Infection, Genetics and Evolution | 2015 | 255 |
| 24 | Aedes aegypti vector competence studies: A review | Infection, Genetics and Evolution | 2019 | 251 |
| 25 | Recent progress and challenges in drug development against COVID-19 coronavirus (SARS-CoV-2) - an update on the status | Infection, Genetics and Evolution | 2020 | 248 |
| 26 | Anaplasma, Ehrlichia, and “Candidatus Neoehrlichia” bacteria: Pathogenicity, biodiversity, and molecular genetic characteristics, a review | Infection, Genetics and Evolution | 2011 | 238 |
| 27 | Current understanding of the genetic diversity of Brucella, an expanding genus of zoonotic pathogens | Infection, Genetics and Evolution | 2009 | 236 |
| 28 | Genetic diversity within the morphological species Giardia intestinalis and its relationship to host origin | Infection, Genetics and Evolution | 2003 | 230 |
| 29 | Updated unified phylogenetic classification system and revised nomenclature for Newcastle disease virus | Infection, Genetics and Evolution | 2019 | 227 |
| 30 | Historical evolution and current status of the taxonomy of genus Pseudomonas | Infection, Genetics and Evolution | 2009 | 221 |
| 31 | Temporal, geographic, and host distribution of avian paramyxovirus 1 (Newcastle disease virus) | Infection, Genetics and Evolution | 2016 | 216 |
| 32 | HIV-1 drug resistance and resistance testing | Infection, Genetics and Evolution | 2016 | 215 |
| 33 | Molecular epidemiology, evolution and phylogeny of SARS coronavirus | Infection, Genetics and Evolution | 2019 | 215 |
| 34 | Population genetics, taxonomy, phylogeny and evolution of Borrelia burgdorferi sensu lato | Infection, Genetics and Evolution | 2011 | 210 |
| 35 | Co-evolutionary aspects of human colonisation and infection by Staphylococcus aureus | Infection, Genetics and Evolution | 2009 | 209 |
| 36 | Novel coronavirus: From discovery to clinical diagnostics | Infection, Genetics and Evolution | 2020 | 209 |
| 37 | Genotyping of the Mycobacterium tuberculosis complex using MIRUs: association with VNTR and spoligotyping for molecular epidemiology and evolutionary genetics | Infection, Genetics and Evolution | 2003 | 208 |
| 38 | Poxviruses and the evolution of host range and virulence | Infection, Genetics and Evolution | 2014 | 204 |
| 39 | Pulsed field gel electrophoresis: A review of application and interpretation in the molecular epidemiology of infectious disease | Infection, Genetics and Evolution | 2010 | 200 |
| 40 | European Lymnaeidae (Mollusca: Gastropoda), intermediate hosts of trematodiases, based on nuclear ribosomal DNA ITS-2 sequences | Infection, Genetics and Evolution | 2001 | 198 |
| 41 | The current status on the taxonomy of Pseudomonas revisited: An update | Infection, Genetics and Evolution | 2018 | 196 |
| 42 | A century of Leptospira strain typing | Infection, Genetics and Evolution | 2009 | 195 |
| 43 | Review of global rotavirus strain prevalence data from six years post vaccine licensure surveillance: Is there evidence of strain selection from vaccine pressure? | Infection, Genetics and Evolution | 2014 | 194 |
| 44 | Staphylococcus aureus in veterinary medicine | Infection, Genetics and Evolution | 2014 | 185 |
| 45 | Morphometrics applied to medical entomology | Infection, Genetics and Evolution | 2008 | 184 |
| 46 | Phages of Staphylococcus aureus and their impact on host evolution | Infection, Genetics and Evolution | 2014 | 184 |
| 47 | Blastocystis subtypes detected in humans and animals from Colombia | Infection, Genetics and Evolution | 2014 | 184 |
| 48 | Evolution and genetic diversity of Theileria | Infection, Genetics and Evolution | 2014 | 182 |
| 49 | Reassessment of the epidemiology of amebiasis: State of the art | Infection, Genetics and Evolution | 2009 | 181 |
| 50 | Identification of putative vaccine candidates against Helicobacter pylori exploiting exoproteome and secretome: A reverse vaccinology based approach | Infection, Genetics and Evolution | 2015 | 180 |
