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| The evolution of gene duplications: classifying and distinguishing between models | Nature Reviews Genetics | 2010 | 833 |
| A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1 | Nature Genetics | 2010 | 773 |
| Genome sequence of the pea aphid Acyrthosiphon pisum | PLoS Biology | 2010 | 732 |
| Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus) | Proceedings of the National Academy of Sciences of the United States of America | 2010 | 322 |
| Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis | PLoS Biology | 2010 | 311 |
| ETE: a python Environment for Tree Exploration | BMC Bioinformatics | 2010 | 290 |
| MicroRNA-199b targets the nuclear kinase Dyrk1a in an auto-amplification loop promoting calcineurin/NFAT signalling | Nature Cell Biology | 2010 | 259 |
| A myriad of miRNA variants in control and Huntington's disease brain regions detected by massively parallel sequencing | Nucleic Acids Research | 2010 | 228 |
| Acquisition of prokaryotic genes by fungal genomes | Trends in Genetics | 2010 | 181 |
| MacroRNA underdogs in a microRNA world: evolutionary, regulatory, and biomedical significance of mammalian long non-protein-coding RNA | Biochimica Et Biophysica Acta - Gene Regulatory Mechanisms | 2010 | 179 |
| Sequence space and the ongoing expansion of the protein universe | Nature | 2010 | 151 |
| X-linked thrombocytopenia (XLT) due to WAS mutations: clinical characteristics, long-term outcome, and treatment options | Blood | 2010 | 146 |
| The role of spatially controlled cell proliferation in limb bud morphogenesis | PLoS Biology | 2010 | 143 |
| Peroxisome diversity and evolution | Philosophical Transactions of the Royal Society B: Biological Sciences | 2010 | 133 |
| SeqBuster, a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human embryonic cells | Nucleic Acids Research | 2010 | 131 |
| An atlas of gene regulatory networks reveals multiple three-gene mechanisms for interpreting morphogen gradients | Molecular Systems Biology | 2010 | 124 |
| Mitotic cell-cycle progression is regulated by CPEB1 and CPEB4-dependent translational control | Nature Cell Biology | 2010 | 118 |
| Mechanobiology of embryonic skeletal development: Insights from animal models | Birth Defects Research Part C: Embryo Today Reviews | 2010 | 109 |
| Engineering signal transduction pathways | Cell | 2010 | 94 |
| IntOGen: integration and data mining of multidimensional oncogenomic data | Nature Methods | 2010 | 90 |
| Strategies for protein synthetic biology | Nucleic Acids Research | 2010 | 87 |
| Meiosis requires a translational positive loop where CPEB1 ensues its replacement by CPEB4 | EMBO Journal | 2010 | 79 |
| Dosage sensitivity shapes the evolution of copy-number varied regions | PLoS ONE | 2010 | 76 |
| Measurements of spontaneous rates of mutations in the recent past and the near future | Philosophical Transactions of the Royal Society B: Biological Sciences | 2010 | 75 |
