MEGA6: Molecular Evolutionary Genetics Analysis version 6.0 | Molecular Biology and Evolution | 2013 | 30.2K |
MAFFT multiple sequence alignment software version 7: improvements in performance and usability | Molecular Biology and Evolution | 2013 | 19K |
STAR: ultrafast universal RNA-seq aligner | Bioinformatics | 2013 | 18.1K |
UPARSE: highly accurate OTU sequences from microbial amplicon reads | Nature Methods | 2013 | 8.1K |
Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal | Science Signaling | 2013 | 7.7K |
GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit | Bioinformatics | 2013 | 4.8K |
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration | Briefings in Bioinformatics | 2013 | 4.8K |
QUAST: quality assessment tool for genome assemblies | Bioinformatics | 2013 | 3.5K |
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position | Nature Methods | 2013 | 3.3K |
Genome sequence-based species delimitation with confidence intervals and improved distance functions | BMC Bioinformatics | 2013 | 3.3K |
GSVA: gene set variation analysis for microarray and RNA-seq data | BMC Bioinformatics | 2013 | 2.9K |
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data | Nature Methods | 2013 | 2.8K |
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool | BMC Bioinformatics | 2013 | 2.7K |
Circular RNAs are abundant, conserved, and associated with ALU repeats | Rna | 2013 | 2.5K |
MITOS: improved de novo metazoan mitochondrial genome annotation | Molecular Phylogenetics and Evolution | 2013 | 2.4K |
The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism | Journal of Lipid Research | 2013 | 2.2K |
Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing | Nature Methods | 2013 | 2.2K |
DNA methylation: roles in mammalian development | Nature Reviews Genetics | 2013 | 1.9K |
Burden of depressive disorders by country, sex, age, and year: findings from the global burden of disease study 2010 | PLoS Medicine | 2013 | 1.9K |
Genome-wide methylation profiles reveal quantitative views of human aging rates | Molecular Cell | 2013 | 1.7K |
Ultrafast approximation for phylogenetic bootstrap | Molecular Biology and Evolution | 2013 | 1.7K |
ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility | Molecular Cell | 2013 | 1.6K |
Structure and functions of the bacterial microbiota of plants | Annual Review of Plant Biology | 2013 | 1.6K |
Natural products: a continuing source of novel drug leads | Biochimica Et Biophysica Acta - General Subjects | 2013 | 1.6K |
Dietary (poly)phenolics in human health: structures, bioavailability, and evidence of protective effects against chronic diseases | Antioxidants and Redox Signaling | 2013 | 1.6K |