# | Title | Journal | Year | Citations |
---|
1 | Cutoff criteria for fit indexes in covariance structure analysis: Conventional criteria versus new alternatives | Structural Equation Modeling | 1999 | 69,701 |
2 | Long Short-Term Memory | Neural Computation | 1997 | 58,553 |
3 | The Measurement of Observer Agreement for Categorical Data | Biometrics | 1977 | 55,540 |
4 | Efficiency of ab-initio total energy calculations for metals and semiconductors using a plane-wave basis set | Computational Materials Science | 1996 | 54,900 |
5 | Fitting Linear Mixed-Effects Models Usinglme4 | Journal of Statistical Software | 2015 | 51,305 |
6 | The Sequence Alignment/Map format and SAMtools | Bioinformatics | 2009 | 49,124 |
7 | Trimmomatic: a flexible trimmer for Illumina sequence data | Bioinformatics | 2014 | 46,646 |
8 | Fast and accurate short read alignment with Burrows–Wheeler transform | Bioinformatics | 2009 | 43,062 |
9 | Nonparametric Estimation from Incomplete Observations | Journal of the American Statistical Association | 1958 | 42,634 |
10 | Distinctive Image Features from Scale-Invariant Keypoints | International Journal of Computer Vision | 2004 | 42,314 |
11 | Support-vector networks | Machine Learning | 1995 | 38,107 |
12 | UCSF Chimera?A visualization system for exploratory research and analysis | Journal of Computational Chemistry | 2004 | 37,095 |
13 | STAR: ultrafast universal RNA-seq aligner | Bioinformatics | 2013 | 35,376 |
14 | Fast Parallel Algorithms for Short-Range Molecular Dynamics | Journal of Computational Physics | 1995 | 35,279 |
15 | Image Quality Assessment: From Error Visibility to Structural Similarity | IEEE Transactions on Image Processing | 2004 | 34,925 |
16 | Perceived Usefulness, Perceived Ease of Use, and User Acceptance of Information Technology | MIS Quarterly: Management Information Systems | 1989 | 34,035 |
17 | Estimating the Dimension of a Model | Annals of Statistics | 1978 | 33,253 |
18 | A fast and elitist multiobjective genetic algorithm: NSGA-II | IEEE Transactions on Evolutionary Computation | 2002 | 32,998 |
19 | edgeR: a Bioconductor package for differential expression analysis of digital gene expression data | Bioinformatics | 2010 | 32,955 |
20 | A Threshold Selection Method from Gray-Level Histograms | IEEE Transactions on Systems, Man, and Cybernetics | 1979 | 30,260 |
21 | A Coefficient of Agreement for Nominal Scales | Educational and Psychological Measurement | 1960 | 30,234 |
22 | Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing | Journal of the Royal Statistical Society Series B: Methodological | 1995 | 29,977 |
23 | Coefficient alpha and the internal structure of tests | Psychometrika | 1951 | 29,707 |
24 | U-Net: Convolutional Networks for Biomedical Image Segmentation | Lecture Notes in Computer Science | 2015 | 27,139 |
25 | Quantifying heterogeneity in a meta-analysis | Statistics in Medicine | 2002 | 26,845 |
26 | RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies | Bioinformatics | 2014 | 26,744 |
27 | MrBayes 3: Bayesian phylogenetic inference under mixed models | Bioinformatics | 2003 | 26,519 |
28 | Clustal W and Clustal X version 2.0 | Bioinformatics | 2007 | 25,174 |
29 | LIBSVM | ACM Transactions on Intelligent Systems and Technology | 2011 | 25,138 |
30 | An Algorithm for Least-Squares Estimation of Nonlinear Parameters | Journal of the Society for Industrial and Applied Mathematics | 1963 | 24,784 |
31 | Semiempirical GGA-type density functional constructed with a long-range dispersion correction | Journal of Computational Chemistry | 2006 | 24,222 |
32 | ImageNet Large Scale Visual Recognition Challenge | International Journal of Computer Vision | 2015 | 24,215 |
33 | Measuring the efficiency of decision making units | European Journal of Operational Research | 1978 | 22,137 |
34 | User Acceptance of Information Technology: Toward a Unified View | MIS Quarterly: Management Information Systems | 2003 | 21,969 |
35 | Multiwfn: A multifunctional wavefunction analyzer | Journal of Computational Chemistry | 2012 | 21,818 |
36 | A Computational Approach to Edge Detection | IEEE Transactions on Pattern Analysis and Machine Intelligence | 1986 | 21,603 |
37 | The central role of the propensity score in observational studies for causal effects | Biometrika | 1983 | 21,591 |
38 | AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading | Journal of Computational Chemistry | 2010 | 21,573 |
39 | Compressed sensing | IEEE Transactions on Information Theory | 2006 | 20,437 |
40 | BEDTools: a flexible suite of utilities for comparing genomic features | Bioinformatics | 2010 | 20,367 |
41 | SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing | Journal of Computational Biology | 2012 | 20,193 |
42 | MRBAYES: Bayesian inference of phylogenetic trees | Bioinformatics | 2001 | 20,154 |
43 | Faster R-CNN: Towards Real-Time Object Detection with Region Proposal Networks | IEEE Transactions on Pattern Analysis and Machine Intelligence | 2017 | 20,130 |
44 | General atomic and molecular electronic structure system | Journal of Computational Chemistry | 1993 | 19,020 |
45 | MODELTEST: testing the model of DNA substitution | Bioinformatics | 1998 | 18,761 |
46 | Bagging predictors | Machine Learning | 1996 | 18,759 |
47 | Search and clustering orders of magnitude faster than BLAST | Bioinformatics | 2010 | 18,572 |
48 | Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes | Journal of Computational Physics | 1977 | 18,418 |
49 | A note on two problems in connexion with graphs | Numerische Mathematik | 1959 | 18,243 |
50 | WGCNA: an R package for weighted correlation network analysis | BMC Bioinformatics | 2008 | 17,294 |
51 | HTSeq—a Python framework to work with high-throughput sequencing data | Bioinformatics | 2015 | 17,270 |
52 | The empirical mode decomposition and the Hilbert spectrum for nonlinear and non-stationary time series analysis | Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences | 1998 | 17,192 |
53 | Multiple Range and Multiple F Tests | Biometrics | 1955 | 17,123 |
54 | SMOTE: Synthetic Minority Over-sampling Technique | Journal of Artificial Intelligence Research | 0 | 17,022 |
55 | Textural Features for Image Classification | IEEE Transactions on Systems, Man, and Cybernetics | 1973 | 16,889 |
56 | AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility | Journal of Computational Chemistry | 2009 | 16,850 |
57 | featureCounts: an efficient general purpose program for assigning sequence reads to genomic features | Bioinformatics | 2014 | 16,839 |
58 | A theory for multiresolution signal decomposition: the wavelet representation | IEEE Transactions on Pattern Analysis and Machine Intelligence | 1989 | 16,677 |
59 | Comparing the Areas under Two or More Correlated Receiver Operating Characteristic Curves: A Nonparametric Approach | Biometrics | 1988 | 16,564 |
60 | The measurement of observer agreement for categorical data | Biometrics | 1977 | 16,399 |
61 | Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data | Bioinformatics | 2012 | 16,096 |
62 | RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome | BMC Bioinformatics | 2011 | 16,042 |
63 | Multilayer feedforward networks are universal approximators | Neural Networks | 1989 | 16,040 |
64 | Effect of the damping function in dispersion corrected density functional theory | Journal of Computational Chemistry | 2011 | 15,980 |
65 | Initial conditions and moment restrictions in dynamic panel data models | Journal of Econometrics | 1998 | 15,755 |
66 | Fuzzy identification of systems and its applications to modeling and control | IEEE Transactions on Systems, Man, and Cybernetics | 1985 | 15,669 |
67 | Generalized autoregressive conditional heteroskedasticity | Journal of Econometrics | 1986 | 15,494 |
68 | Maximum Likelihood from Incomplete Data Via the EM Algorithm | Journal of the Royal Statistical Society Series B: Methodological | 1977 | 15,310 |
69 | Scalable molecular dynamics with NAMD | Journal of Computational Chemistry | 2005 | 15,208 |
70 | Longitudinal data analysis using generalized linear models | Biometrika | 1986 | 15,204 |
71 | An introduction to ROC analysis | Pattern Recognition Letters | 2006 | 14,987 |
72 | BLAST+: architecture and applications | BMC Bioinformatics | 2009 | 14,935 |
73 | RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models | Bioinformatics | 2006 | 14,675 |
74 | A Survey on Transfer Learning | IEEE Transactions on Knowledge and Data Engineering | 2010 | 14,602 |
75 | The Elements of Statistical Learning | Springer Series in Statistics | 2009 | 14,554 |
76 | Hierarchical Grouping to Optimize an Objective Function | Journal of the American Statistical Association | 1963 | 14,513 |
77 | Regression Shrinkage and Selection Via the Lasso | Journal of the Royal Statistical Society Series B: Methodological | 1996 | 14,507 |
78 | GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers | SoftwareX | 2015 | 14,414 |
79 | The genetical evolution of social behaviour. I | Journal of Theoretical Biology | 1964 | 14,412 |
80 | Development and testing of a general amber force field | Journal of Computational Chemistry | 2004 | 14,342 |
81 | The Structure and Function of Complex Networks | SIAM Review | 2003 | 14,326 |
82 | CHARMM: A program for macromolecular energy, minimization, and dynamics calculations | Journal of Computational Chemistry | 1983 | 14,316 |
83 | Distribution of the Estimators for Autoregressive Time Series with a Unit Root | Journal of the American Statistical Association | 1979 | 14,276 |
84 | On Information and Sufficiency | Annals of Mathematical Statistics | 1951 | 14,169 |
85 | lavaan: AnRPackage for Structural Equation Modeling | Journal of Statistical Software | 2012 | 14,037 |
86 | Greedy function approximation: A gradient boosting machine. | Annals of Statistics | 2001 | 13,968 |
87 | An analysis of variance test for normality (complete samples) | Biometrika | 1965 | 13,862 |
88 | Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images | IEEE Transactions on Pattern Analysis and Machine Intelligence | 1984 | 13,839 |
89 | GROMACS: Fast, flexible, and free | Journal of Computational Chemistry | 2005 | 13,676 |
90 | DnaSP v5: a software for comprehensive analysis of DNA polymorphism data | Bioinformatics | 2009 | 13,645 |
91 | Snakes: Active contour models | International Journal of Computer Vision | 1988 | 13,615 |
92 | A method for registration of 3-D shapes | IEEE Transactions on Pattern Analysis and Machine Intelligence | 1992 | 13,602 |
93 | LINCS: A linear constraint solver for molecular simulations | Journal of Computational Chemistry | 1997 | 13,446 |
94 | Operating Characteristics of a Rank Correlation Test for Publication Bias | Biometrics | 1994 | 13,306 |
95 | UCHIME improves sensitivity and speed of chimera detection | Bioinformatics | 2011 | 13,241 |
96 | Haploview: analysis and visualization of LD and haplotype maps | Bioinformatics | 2005 | 13,223 |
97 | Statistical analysis of cointegration vectors | Journal of Economic Dynamics and Control | 1988 | 13,109 |
98 | Another look at the instrumental variable estimation of error-components models | Journal of Econometrics | 1995 | 12,990 |
99 | Regularization and variable selection via the elastic net | Journal of the Royal Statistical Society Series B: Statistical Methodology | 2005 | 12,982 |
100 | A logical calculus of the ideas immanent in nervous activity | The Bulletin of Mathematical Biophysics | 1943 | 12,960 |