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seqtk
seqtk
written in C
191
Citations
Citing Articles
Title
Journal
Year
Citations
MetaTrass: A high‐quality metagenome assembler of the human gut microbiome by cobarcoding sequencing reads
0
Reference-free assembly of long-read transcriptome sequencing data with RNA-Bloom2
0
Capturing the antibiotic resistome of preterm infants reveals new benefits of probiotic supplementation
2022
3
Complete gammaproteobacterial endosymbiont genome assembly from a seep tubeworm Lamellibrachia satsuma
2022
A new and efficient enrichment method for metagenomic sequencing of monkeypox virus
A comparison of high-throughput SARS-CoV-2 sequencing methods from nasopharyngeal samples
Scientific Reports
2022
1
A Draft Human Pangenome Reference
1
The Divergent Pattern of SARS-CoV-2 Variant Predominance and Transmission Dynamics in the Brazilian Island of Ilhabela
Viruses
2022
0
Recombinant Noroviruses Circulating in Spain from 2016 to 2020 and Proposal of Two Novel Genotypes within Genogroup I
Microbiology Spectrum
0
In-depth characterization of denitrifier communities across different soil ecosystems in the tundra
Environmental Microbiomes
2022
1
Pseudomonas aeruginosa
transcriptome analysis in a cystic fibrosis lung model reveals metabolic changes accompanying biofilm maturation and increased antibiotic tolerance over time
Newcastle disease burden in Nepal and efficacy of Tablet I-2 vaccine in commercial and backyard poultry production
0
RResolver: efficient short-read repeat resolution within ABySS
BMC Bioinformatics
2022
Empirical estimates of the mutation rate for an alphabaculovirus
PLoS Genetics
2022
0
Genome Sequence of Atyrau-5BJN(IL18), a Recombinant Lumpy Skin Disease Virus with Knockout of Virulence Genes
Microbiology Resource Announcements
0
PIMGAVir and Vir-MinION: Two Viral Metagenomic Pipelines for Complete Baseline Analysis of 2nd and 3rd Generation Data
Viruses
2022
MycoSNP: A Portable Workflow for Performing Whole-Genome Sequencing Analysis of Candida auris
Methods in Molecular Biology
2022
1
Performance Characteristics of Next-Generation Sequencing for the Detection of Antimicrobial Resistance Determinants in Escherichia coli Genomes and Metagenomes
MSystems
0
Metagenomics vs. total RNA sequencing: most accurate data-processing tools, microbial identification accuracy, and implications for freshwater assessments
0
Hybridization drives mitochondrial DNA degeneration and metabolic shift in a species with biparental mitochondrial inheritance
Assembling Plant Genomes with Long-Read Sequencing.
Methods in Molecular Biology
2022
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2020
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2020
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2020
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2020
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