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wgsim
wgsim
written in C
80
Citations
Citing Articles
Title
Journal
Year
Citations
PerSVade: personalized structural variant detection in any species of interest
2022
0
SeqScreen: accurate and sensitive functional screening of pathogenic sequences via ensemble learning
Genome Biology
2022
0
Data_Sheet_1.docx
2020
The Genome of the Acid Soil-Adapted Strain OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host.
Frontiers in Microbiology
2022
0
Improved eukaryotic detection compatible with large-scale automated analysis of metagenomes
vcferr: Development, Validation, and Application of a SNP Genotyping Error Simulation Framework
0
Polypolish: Short-read polishing of long-read bacterial genome assemblies.
PLoS Computational Biology
2022
13
A cautionary note on the use of haplotype callers in Phylogenomics
Benchmarking of computational error-correction methods for next-generation sequencing data
0
Combining accurate tumour genome simulation with crowd-sourcing to benchmark somatic structural variant detection
1
Sim3C: simulation of HiC and Meta3C proximity ligation sequencing technologies
Patterns of genomic variation in the opportunistic pathogen Candida glabrata suggest the existence of mating and a secondary association to the human host
1
Local Rank Distance
Advances in Computer Vision and Pattern Recognition
2016
A rank-based sequence aligner with applications in phylogenetic analysis
PLoS ONE
2014
11
Nebula: Ultra-efficient mapping-free structural variant genotyper
3
Kevlar: a mapping-free framework for accurate discovery ofde novovariants
1
BiSulfite Bolt: A BiSulfite Sequencing Analysis Platform
1
Classification of grain amaranths using chromosome-level genome assembly of ramdana, A. hypochondriacus
2
HolistIC: Leveraging Hi-C and Whole Genome Shotgun Sequencing for Double Minute Chromosome Discovery
1
Sexual Reproductive Strategies as Resolved through Computational Methods Designed for Aneuploid Genomes
Genes
2021
5
Benchmarking of computational error-correction methods for next-generation sequencing data
Genome Biology
2020
11
Classification of Grain Amaranths Using Chromosome-Level Genome Assembly of Ramdana,
Frontiers in Plant Science
2020
4
A universal and independent synthetic DNA ladder for the quantitative measurement of genomic features
Nature Communications
2020
1
SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies
Genome Biology
2019
52
A Deep Learning Approach for Detecting Copy Number Variation in Next-Generation Sequencing Data
G3: Genes, Genomes, Genetics
2019
10
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