80
Citations

Citing Articles

TitleJournalYearCitations
PerSVade: personalized structural variant detection in any species of interest2022
SeqScreen: accurate and sensitive functional screening of pathogenic sequences via ensemble learningGenome Biology2022
Data_Sheet_1.docx2020
The Genome of the Acid Soil-Adapted Strain OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host.Frontiers in Microbiology2022
Improved eukaryotic detection compatible with large-scale automated analysis of metagenomes
vcferr: Development, Validation, and Application of a SNP Genotyping Error Simulation Framework
Polypolish: Short-read polishing of long-read bacterial genome assemblies.PLoS Computational Biology20221
A cautionary note on the use of haplotype callers in Phylogenomics
Benchmarking of computational error-correction methods for next-generation sequencing data0
Combining accurate tumour genome simulation with crowd-sourcing to benchmark somatic structural variant detection1
Sim3C: simulation of HiC and Meta3C proximity ligation sequencing technologies
Patterns of genomic variation in the opportunistic pathogen Candida glabrata suggest the existence of mating and a secondary association to the human host1
Local Rank DistanceAdvances in Computer Vision and Pattern Recognition2016
A rank-based sequence aligner with applications in phylogenetic analysisPLoS ONE201410
Nebula: Ultra-efficient mapping-free structural variant genotyper3
Kevlar: a mapping-free framework for accurate discovery ofde novovariants1
BiSulfite Bolt: A BiSulfite Sequencing Analysis Platform1
Classification of grain amaranths using chromosome-level genome assembly of ramdana, A. hypochondriacus2
HolistIC: Leveraging Hi-C and Whole Genome Shotgun Sequencing for Double Minute Chromosome Discovery
Sexual Reproductive Strategies as Resolved through Computational Methods Designed for Aneuploid GenomesGenes20214
Benchmarking of computational error-correction methods for next-generation sequencing dataGenome Biology202011
Classification of Grain Amaranths Using Chromosome-Level Genome Assembly of Ramdana,Frontiers in Plant Science20204
A universal and independent synthetic DNA ladder for the quantitative measurement of genomic featuresNature Communications20201
SyRI: finding genomic rearrangements and local sequence differences from whole-genome assembliesGenome Biology201944
A Deep Learning Approach for Detecting Copy Number Variation in Next-Generation Sequencing DataG3: Genes, Genomes, Genetics201910