| # | Title | Journal | Year | Citations |
|---|
|
| 1 | Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) | Autophagy | 2016 | 4,789 |
| 2 | Guidelines for the use and interpretation of assays for monitoring autophagy | Autophagy | 2012 | 3,158 |
| 3 | Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1 | Autophagy | 2021 | 1,642 |
| 4 | Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia | Nature | 2006 | 757 |
| 5 | A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing | Nature | 2020 | 453 |
| 6 | Mitochondrial double-stranded RNA triggers antiviral signalling in humans | Nature | 2018 | 445 |
| 7 | PlasFlow: predicting plasmid sequences in metagenomic data using genome signatures | Nucleic Acids Research | 2018 | 423 |
| 8 | Development and evaluation of a deep learning model for protein–ligand binding affinity prediction | Bioinformatics | 2018 | 420 |
| 9 | Generic GPCR residue numbers – aligning topology maps while minding the gaps | Trends in Pharmacological Sciences | 2015 | 411 |
| 10 | SnRK2 Protein Kinases—Key Regulators of Plant Response to Abiotic Stresses | OMICS A Journal of Integrative Biology | 2011 | 402 |
| 11 | Binding of transition metal ions to albumin: Sites, affinities and rates | Biochimica Et Biophysica Acta - General Subjects | 2013 | 372 |
| 12 | High Guanine and Cytosine Content Increases mRNA Levels in Mammalian Cells | PLoS Biology | 2006 | 370 |
| 13 | Mistargeted mitochondrial proteins activate a proteostatic response in the cytosol | Nature | 2015 | 364 |
| 14 | Selectivity of 4,5,6,7-tetrabromobenzotriazole, an ATP site-directed inhibitor of protein kinase CK2 (‘casein kinase-2’) | FEBS Letters | 2001 | 318 |
| 15 | The SOS system: A complex and tightly regulated response to DNA damage | Environmental and Molecular Mutagenesis | 2019 | 306 |
| 16 | The biological role of dolichol | Biochemical Journal | 1988 | 298 |
| 17 | Endonucleolytic RNA cleavage by a eukaryotic exosome | Nature | 2008 | 288 |
| 18 | Structural and Biochemical Insights to the Role of the CCR4-NOT Complex and DDX6 ATPase in MicroRNA Repression | Molecular Cell | 2014 | 286 |
| 19 | Compounds Which Serve as the Sole Source of Carbon or Nitrogen for Salmonella typhimurium LT-2 | Journal of Bacteriology | 1969 | 281 |
| 20 | Genome of Bacteriophage P1 | Journal of Bacteriology | 2004 | 267 |
| 21 | SRD5A3 Is Required for Converting Polyprenol to Dolichol and Is Mutated in a Congenital Glycosylation Disorder | Cell | 2010 | 259 |
| 22 | Inducible SOS Response System of DNA Repair and Mutagenesis in Escherichia coli | International Journal of Biological Sciences | 2008 | 253 |
| 23 | Changes to virus taxonomy and to the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2021) | Archives of Virology | 2021 | 249 |
| 24 | CENP-C Is a Structural Platform for Kinetochore Assembly | Current Biology | 2011 | 243 |
| 25 | The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L | EMBO Journal | 2010 | 242 |
| 26 | Characterization of the branch site in lariat RNAs produced by splicing of mRNA precursors | Nature | 1985 | 238 |
| 27 | ANGUSTIFOLIA3 Binds to SWI/SNF Chromatin Remodeling Complexes to Regulate Transcription during Arabidopsis Leaf Development | Plant Cell | 2014 | 227 |
| 28 | A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae) | Scientific Reports | 2018 | 225 |
| 29 | The Role of Annexin 1 in Drought Stress in Arabidopsis | Plant Physiology | 2009 | 223 |
| 30 | A Global Review on Short Peptides: Frontiers and Perspectives | Molecules | 2021 | 223 |
| 31 | Molecular Biology of Osteosarcoma | Cancers | 2020 | 212 |
| 32 | Sulfate and thiosulfate transport in Escherichia coli K-12: nucleotide sequence and expression of the cysTWAM gene cluster | Journal of Bacteriology | 1990 | 206 |
| 33 | Three Members of the 6-cys Protein Family of Plasmodium Play a Role in Gamete Fertility | PLoS Pathogens | 2010 | 202 |
| 34 | Biodiversity of bacteriophages: morphological and biological properties of a large group of phages isolated from urban sewage | Scientific Reports | 2016 | 199 |
| 35 | Damage of zinc fingers in DNA repair proteins, a novel molecular mechanism in carcinogenesis | Toxicology Letters | 2006 | 198 |
| 36 | The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species | Microbiology and Molecular Biology Reviews | 2016 | 197 |
| 37 | A global diatom database – abundance, biovolume and biomass in the world ocean | Earth System Science Data | 2012 | 197 |
| 38 | The role of integration host factor In gene expression in Escherichia coli | Molecular Microbiology | 1992 | 193 |
| 39 | Polyisoprenoids: Structure, biosynthesis and function | Progress in Lipid Research | 2005 | 191 |
| 40 | Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications | Planta | 2007 | 186 |
| 41 | Deficient in DNA Methylation 1 (DDM1) Defines a Novel Family of Chromatin-remodeling Factors | Journal of Biological Chemistry | 2003 | 181 |
| 42 | Trimethylamine-N-Oxide: A Carnitine-Derived Metabolite That Prolongs the Hypertensive Effect of Angiotensin II in Rats | Canadian Journal of Cardiology | 2014 | 180 |
| 43 | Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee | Archives of Virology | 2018 | 180 |
| 44 | Structure and functions of plant calcium-dependent protein kinases. | Acta Biochimica Polonica | 2007 | 179 |
| 45 | Human mitochondrial RNA decay mediated by PNPase–hSuv3 complex takes place in distinct foci | Nucleic Acids Research | 2013 | 178 |
| 46 | Maf1p, a Negative Effector of RNA Polymerase III in Saccharomyces cerevisiae | Molecular and Cellular Biology | 2001 | 173 |
| 47 | Cytoplasmic RNA decay pathways - Enzymes and mechanisms | Biochimica Et Biophysica Acta - Molecular Cell Research | 2016 | 172 |
| 48 | Recent changes to virus taxonomy ratified by the International Committee on Taxonomy of Viruses (2022) | Archives of Virology | 2022 | 171 |
| 49 | Comparison of protein precipitation methods for various rat brain structures prior to proteomic analysis | Electrophoresis | 2010 | 169 |
| 50 | The Human Nuclear Exosome Targeting Complex Is Loaded onto Newly Synthesized RNA to Direct Early Ribonucleolysis | Cell Reports | 2015 | 169 |
