| # | Title | Journal | Year | Citations |
|---|
|
| 1 | A practical guide to single-molecule FRET | Nature Methods | 2008 | 1,917 |
| 2 | Scalable molecular dynamics on CPU and GPU architectures with NAMD | Journal of Chemical Physics | 2020 | 1,805 |
| 3 | Electron transfer by domain movement in cytochrome bc1 | Nature | 1998 | 1,089 |
| 4 | A Model for Photoreceptor-Based Magnetoreception in Birds | Biophysical Journal | 2000 | 981 |
| 5 | Light Absorption and Energy Transfer in the Antenna Complexes of Photosynthetic Organisms | Chemical Reviews | 2017 | 863 |
| 6 | Flexible Fitting of Atomic Structures into Electron Microscopy Maps Using Molecular Dynamics | Structure | 2008 | 859 |
| 7 | Control of the Selectivity of the Aquaporin Water Channel Family by Global Orientational Tuning | Science | 2002 | 846 |
| 8 | Solid-state NMR structure of a pathogenic fibril of full-length human α-synuclein | Nature Structural and Molecular Biology | 2016 | 844 |
| 9 | Structural mechanism of plant aquaporin gating | Nature | 2006 | 767 |
| 10 | Metalloproteins Containing Cytochrome, Iron–Sulfur, or Copper Redox Centers | Chemical Reviews | 2014 | 718 |
| 11 | Dynamical networks in tRNA:protein complexes | Proceedings of the National Academy of Sciences of the United States of America | 2009 | 704 |
| 12 | Advances in Single-Molecule Fluorescence Methods for Molecular Biology | Annual Review of Biochemistry | 2008 | 683 |
| 13 | EosFP, a fluorescent marker protein with UV-inducible green-to-red fluorescence conversion | Proceedings of the National Academy of Sciences of the United States of America | 2004 | 647 |
| 14 | Accelerating molecular modeling applications with graphics processors | Journal of Computational Chemistry | 2007 | 625 |
| 15 | An extended dynamical hydration shell around proteins | Proceedings of the National Academy of Sciences of the United States of America | 2007 | 618 |
| 16 | Good Practices in Free-Energy Calculations | Journal of Physical Chemistry B | 2010 | 531 |
| 17 | High-Efficiency Multiplex Genome Editing of Streptomyces Species Using an Engineered CRISPR/Cas System | ACS Synthetic Biology | 2015 | 489 |
| 18 | Atomic scale movement of the voltage-sensing region in a potassium channel measured via spectroscopy | Nature | 1999 | 478 |
| 19 | Structure and Function of CytochromebcComplexes | Annual Review of Biochemistry | 2000 | 474 |
| 20 | New developments in RiPP discovery, enzymology and engineering | Natural Product Reports | 2021 | 464 |
| 21 | The Cytochromebc1Complex: Function in the Context of Structure | Annual Review of Physiology | 2004 | 430 |
| 22 | Mechanistic Understanding of Lanthipeptide Biosynthetic Enzymes | Chemical Reviews | 2017 | 403 |
| 23 | Probing cellular protein complexes using single-molecule pull-down | Nature | 2011 | 396 |
| 24 | Amphotericin forms an extramembranous and fungicidal sterol sponge | Nature Chemical Biology | 2014 | 380 |
| 25 | Molecular dynamics simulations of large macromolecular complexes | Current Opinion in Structural Biology | 2015 | 370 |
| 26 | The role of the quinone pool in the cyclic electron-transfer chain of Rhodopseudomonas sphaeroides A modified Q-cycle mechanism | Biochimica Et Biophysica Acta - Bioenergetics | 1983 | 368 |
| 27 | Single-molecule high-resolution imaging with photobleaching | Proceedings of the National Academy of Sciences of the United States of America | 2004 | 368 |
| 28 | The Adaptive Biasing Force Method: Everything You Always Wanted To Know but Were Afraid To Ask | Journal of Physical Chemistry B | 2015 | 368 |
| 29 | Ab Initio Molecular Dynamics and Time-Resolved Photoelectron Spectroscopy of Electronically Excited Uracil and Thymine | Journal of Physical Chemistry A | 2007 | 364 |
| 30 | MultiSeq: unifying sequence and structure data for evolutionary analysis | BMC Bioinformatics | 2006 | 353 |
| 31 | Why do fish die after severe exercise? | Journal of Fish Biology | 1983 | 337 |
| 32 | Theory and Simulation of Water Permeation in Aquaporin-1 | Biophysical Journal | 2004 | 333 |
| 33 | In Situ Structure of Neuronal C9orf72 Poly-GA Aggregates Reveals Proteasome Recruitment | Cell | 2018 | 333 |
| 34 | Electrical recognition of the twenty proteinogenic amino acids using an aerolysin nanopore | Nature Biotechnology | 2020 | 329 |
| 35 | Structure-guided multivalent nanobodies block SARS-CoV-2 infection and suppress mutational escape | Science | 2021 | 325 |
| 36 | Bisphosphonates Inhibit the Growth ofTrypanosomabrucei,Trypanosomacruzi,Leishmaniadonovani,Toxoplasmagondii, andPlasmodiumfalciparum: A Potential Route to Chemotherapy | Journal of Medicinal Chemistry | 2001 | 315 |
| 37 | Discovery Through the Computational Microscope | Structure | 2009 | 314 |
| 38 | Ten-Microsecond Molecular Dynamics Simulation of a Fast-Folding WW Domain | Biophysical Journal | 2008 | 312 |
| 39 | Mapping 3D genome organization relative to nuclear compartments using TSA-Seq as a cytological ruler | Journal of Cell Biology | 2018 | 311 |
| 40 | Terpene Biosynthesis: Modularity Rules | Angewandte Chemie - International Edition | 2012 | 307 |
| 41 | Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB | Nature | 2015 | 283 |
| 42 | Asymmetric Unwrapping of Nucleosomes under Tension Directed by DNA Local Flexibility | Cell | 2015 | 282 |
| 43 | Structure and Mechanism of the Lantibiotic Cyclase Involved in Nisin Biosynthesis | Science | 2006 | 279 |
| 44 | Fluorescence-Force Spectroscopy Maps Two-Dimensional Reaction Landscape of the Holliday Junction | Science | 2007 | 278 |
| 45 | Intersubunit coordination in a homomeric ring ATPase | Nature | 2009 | 274 |
| 46 | Impact of protein pre-coating on the protein corona composition and nanoparticle cellular uptake | Biomaterials | 2016 | 268 |
| 47 | Mitochondrial VDAC1: A Key Gatekeeper as Potential Therapeutic Target | Frontiers in Physiology | 2017 | 264 |
| 48 | Analytical shape computation of macromolecules: I. molecular area and volume through alpha shape | Proteins: Structure, Function and Bioinformatics | 1998 | 262 |
| 49 | Designing microbial consortia with defined social interactions | Nature Chemical Biology | 2018 | 261 |
| 50 | Proton-Detected Solid-State NMR Spectroscopy of Fully Protonated Proteins at 40 kHz Magic-Angle Spinning | Journal of the American Chemical Society | 2007 | 260 |
