| Alternative COVID-19 mitigation measures in school classrooms: analysis using an agent-based model of SARS-CoV-2 transmission | | 2022 |
| Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era | | 2022 |
| Detection of SARS-CoV-2 N501Y mutation among SARS-CoV-2 variants of concern circulating in Northern Cyprus | Future Virology | 2022 |
| Vaccination and variants: Retrospective model for the evolution of Covid-19 in Italy | PLoS ONE | 2022 |
| Increasing SARS-CoV2 cases, hospitalizations and deaths among the vaccinated elderly populations during the Omicron (B.1.1.529) variant surge in UK | | |
| Types of Variants Among Increased Cases of COVID-19 in the Western Region of Saudi Arabia in June 2021 | Cureus | 2022 |
| Adjusting for time of infection or positive test when estimating the risk of a post-infection outcome in an epidemic | Statistical Methods in Medical Research | |
| The phylodynamics of SARS-CoV-2 during 2020 in Finland | Communications Medicine | 2022 |
| Assessment of mortality and hospital admissions associated with confirmed infection with SARS-CoV-2 Alpha variant: a matched cohort and time-to-event analysis, England, October to December 2020. | Eurosurveillance | 2022 |
| Dynamics of SARS-CoV-2 Variants of Concern in Brazil, Early 2021. | Frontiers in Public Health | 2021 |
| CalmBelt: Rapid SARS-CoV-2 Genome Characterization for Outbreak Tracking. | Frontiers in Medicine | 2021 |
| SARS-CoV-2 Testing in the Community: Testing Positive Samples with the TaqMan SARS-CoV-2 Mutation Panel To Find Variants in Real Time. | Journal of Clinical Microbiology | 2022 |
| The Successes and Challenges of SARS-CoV-2 Molecular Testing in the United States | Clinics in Laboratory Medicine | 2022 |
| SARS-CoV-2 Variant Determination Through SNP Assays in Samples From Industry Workers From Rio de Janeiro, Brazil. | Frontiers in Microbiology | 2021 |
| Repurposing of approved drugs and nutraceuticals to identify potential inhibitors of SARS-COV-2’s entry into human host cells: a structural analysis using induced-fit docking, MMGBSA and molecular dynamics simulation approach | Molecular Simulation | |
| COVID-19 infections in day care centres in Germany: social and organisational determinants of infections in children and staff in the second and third wave of the pandemic. | BMC Public Health | 2022 |
| Context-specific emergence and growth of the SARS-CoV-2 Delta variant. | | 2021 |
| Incidence Trends for SARS-CoV-2 Alpha and Beta Variants, Finland, Spring 2021 | Emerging Infectious Diseases | 2021 |
| A SARS-CoV-2 antigen rapid diagnostic test for resource limited settings | Scientific Reports | 2021 |
| Behaviour, booster vaccines and waning vaccine protection: modelling the medium-term dynamics of SARS-CoV-2 transmission in England | | 2021 |
| Structural and functional insights into the spike protein mutations of emerging SARS-CoV-2 variants | Cellular and Molecular Life Sciences | 2021 |
| Highly-Sensitive Lineage Discrimination of SARS-CoV-2 Variants through Allele-Specific Probe Polymerase Chain Reaction | | |
| Profiling Antibody Response Patterns in COVID-19: Spike S1-Reactive IgA Signature in the Evolution of SARS-CoV-2 Infection | Frontiers in Immunology | 2021 |
| Mutations in emerging variant of concern lineages disrupt genomic sequencing of SARS-CoV-2 clinical specimens | International Journal of Infectious Diseases | 2021 |
| Data-driven analysis of amino acid change dynamics timely reveals SARS-CoV-2 variant emergence | Scientific Reports | 2021 |
| Genomic reconstruction of the SARS-CoV-2 epidemic in England | Nature | 2021 |
| Increased risk of death in COVID-19 hospital admissions during the second wave as compared to the first epidemic wave: a prospective, single-centre cohort study in London, UK | Infection | 2021 |
| SARS-CoV-2 UK, South African and Brazilian Variants in Karachi- Pakistan | Frontiers in Molecular Biosciences | 2021 |
| A rapid and low-cost protocol for the detection of B.1.1.7 lineage of SARS-CoV-2 by using SYBR Green-based RT-qPCR | Molecular Biology Reports | 2021 |
| Ten emerging SARS-CoV-2 spike variants exhibit variable infectivity, animal tropism, and antibody neutralization | Communications Biology | 2021 |
| Nucleocapsid antibody positivity as a marker of past SARS-CoV-2 infection in population serosurveillance studies: impact of variant, vaccination, and choice of assay cut-off | | |
| Importation Risk Stratification for COVID19 using Quantitative Serology | | |
| What We Do Know and Do Not Yet Know about COVID-19 Vaccines as of the Beginning of the Year 2021 | Journal of Korean Medical Science | 2021 |
| Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland | Epidemics | 2021 |
| SARS-CoV-2 Quasispecies Provides an Advantage Mutation Pool for the Epidemic Variants | Microbiology Spectrum | 2021 |
| Viral loads of Delta-variant SARS-CoV2 breakthrough infections following vaccination and booster with the BNT162b2 vaccine | | |
| Demographic characteristics of SARS-CoV-2 B.1.617.2 (Delta) variant infections in Indian population | | |
| Low dose inocula of SARS-CoV-2 Alpha variant transmits more efficiently than earlier variants in hamsters | Communications Biology | 2021 |
| COVID-19 patients age, comorbidity profiles and clinical presentation related to the SARS-CoV-2 UK-variant spread in the Southeast of France | Scientific Reports | 2021 |
| Estimating the impact of reopening schools on the reproduction number of SARS-CoV-2 in England, using weekly contact survey data | BMC Medicine | 2021 |
| High throughput diagnostics and dynamic risk assessment of SARS-CoV-2 variants of concern | EBioMedicine | 2021 |
| Analysis of alternative Covid-19 mitigation measures in school classrooms: an agent-based model of SARS-CoV-2 transmission | | |
| Emergence of the First Strains of SARS-CoV-2 Lineage B.1.1.7 in Romania: Genomic Analysis | Jmirx Med | 2021 |
| BNT162b2 vaccine booster dose protection: A nationwide study from Israel | | |
| Impact of Triaging for COVID-19 Patients in a Tertiary Care Hospital in West India: A Retrospective Analysis of a Case Series | Journal of Mahatma Gandhi University of Medical Sciences and Technology | 2021 |
| Infection with the SARS-CoV-2 Delta Variant is Associated with Higher Infectious Virus Loads Compared to the Alpha Variant in both Unvaccinated and Vaccinated Individuals | | 2021 |
| Acute SARS-CoV-2 infections harbor limited within-host diversity and transmit via tight transmission bottlenecks | PLoS Pathogens | 2021 |
| Qualitative analysis of a mathematical model with presymptomatic individuals and two SARS-CoV-2 variants | Computational and Applied Mathematics | 2021 |
| Impact of non-pharmaceutical interventions against COVID-19 in Europe in 2020: a quasi-experimental non-equivalent group and time series design study | Eurosurveillance | 2021 |
| Risk of hospital admission for patients with SARS-CoV-2 variant B.1.1.7: cohort analysis | BMJ, The | 2021 |
