Trimmomatic: a flexible trimmer for Illumina sequence data | Bioinformatics | 2014 | 24.7K |
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies | Bioinformatics | 2014 | 17.4K |
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features | Bioinformatics | 2014 | 7.9K |
Prokka: rapid prokaryotic genome annotation | Bioinformatics | 2014 | 6.4K |
Molecular mechanisms of epithelial-mesenchymal transition | Nature Reviews Molecular Cell Biology | 2014 | 4.7K |
InterProScan 5: genome-scale protein function classification | Bioinformatics | 2014 | 3.6K |
Regulation of microRNA biogenesis | Nature Reviews Molecular Cell Biology | 2014 | 3.3K |
Accurate proteome-wide label-free quantification by delayed normalization and maximal peptide ratio extraction, termed MaxLFQ | Molecular and Cellular Proteomics | 2014 | 2.6K |
Improved vectors and genome-wide libraries for CRISPR screening | Nature Methods | 2014 | 2.6K |
Causal analysis approaches in Ingenuity Pathway Analysis | Bioinformatics | 2014 | 2.5K |
MutationTaster2: mutation prediction for the deep-sequencing age | Nature Methods | 2014 | 2.5K |
PEAR: a fast and accurate Illumina Paired-End reAd mergeR | Bioinformatics | 2014 | 2.3K |
Long non-coding RNAs: new players in cell differentiation and development | Nature Reviews Genetics | 2014 | 2.1K |
Remodelling the extracellular matrix in development and disease | Nature Reviews Molecular Cell Biology | 2014 | 2.1K |
Non-viral vectors for gene-based therapy | Nature Reviews Genetics | 2014 | 2K |
Reactive oxygen species in inflammation and tissue injury | Antioxidants and Redox Signaling | 2014 | 2K |
Mitochondrial reactive oxygen species (ROS) and ROS-induced ROS release | Physiological Reviews | 2014 | 2K |
STAMP: statistical analysis of taxonomic and functional profiles | Bioinformatics | 2014 | 2K |
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays | Bioinformatics | 2014 | 1.9K |
Control of apoptosis by the BCL-2 protein family: implications for physiology and therapy | Nature Reviews Molecular Cell Biology | 2014 | 1.9K |
The treatment-naive microbiome in new-onset Crohn's disease | Cell Host and Microbe | 2014 | 1.8K |
circRNA biogenesis competes with pre-mRNA splicing | Molecular Cell | 2014 | 1.8K |
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics | Molecular and Cellular Proteomics | 2014 | 1.7K |
The amyloid state and its association with protein misfolding diseases | Nature Reviews Molecular Cell Biology | 2014 | 1.5K |
cytoHubba: identifying hub objects and sub-networks from complex interactome | BMC Systems Biology | 2014 | 1.5K |