| 1 | De novo design of ribosomally synthesized and post-translationally modified peptides | 15.5 | 18 | Citations (PDF) |
| 2 | Design and regulation of engineered bacteria for environmental release | 9.9 | 117 | Citations (PDF) |
| 3 | Design of a Continuous GAA-Producing Probiotic as a Potential Mitigator of the Effects of Sleep Deprivation | 3.0 | 2 | Citations (PDF) |
| 4 | Constraint-Based Sub-Graph Partitioning for Multi-Cellular Biological Networks 2025, 22, 1888-1901 | | 0 | Citations (PDF) |
| 5 | Synthetic microbe-to-plant communication channels | 10.8 | 53 | Citations (PDF) |
| 6 | Establishing a High-Yield Chloroplast Cell-Free System for Prototyping Genetic Parts | 3.0 | 10 | Citations (PDF) |
| 7 | Infrared‐Scattering by Programmable Peptide‐Melanin Microparticles | 11.9 | 3 | Citations (PDF) |
| 8 | GOLDBAR: A Framework for Combinatorial Biological Design | 3.0 | 5 | Citations (PDF) |
| 9 | Partitioning of a 2-bit hash function across 66 communicating cells | 9.1 | 31 | Citations (PDF) |
| 10 | Functional Redundancy and Dual Function of a Hypothetical Protein in the Biosynthesis of Eunicellane-Type Diterpenoids | 2.5 | 5 | Citations (PDF) |
| 11 | Marine Biofilm Engineered to Produce Current in Response to Small Molecules | 3.0 | 6 | Citations (PDF) |
| 12 | Design of Four Small-Molecule-Inducible Systems in the Yeast Chromosome, Applied to Optimize Terpene Biosynthesis | 3.0 | 24 | Citations (PDF) |
| 13 | Redesign of an Escherichia coli Nissle treatment for phenylketonuria using insulated genomic landing pads and genetic circuits to reduce burden | 3.5 | 30 | Citations (PDF) |
| 14 | Sentinel cells programmed to respond to environmental DNA including human sequences | 9.1 | 15 | Citations (PDF) |
| 15 | Systematic mining of the human microbiome identifies antimicrobial peptides with diverse activity spectra | 9.9 | 68 | Citations (PDF) |
| 16 | Design of a redox-proficient Escherichia coli for screening terpenoids and modifying cytochrome P450s | 32.0 | 27 | Citations (PDF) |
| 17 | Genetic circuit design automation with Cello 2.0 | 10.6 | 144 | Citations (PDF) |
| 18 | Characterizing chemical signaling between engineered “microbial sentinels” in porous microplates | 3.6 | 18 | Citations (PDF) |
| 19 | Engineered plant control of associative nitrogen fixation | 5.2 | 83 | Citations (PDF) |
| 20 | Functional expression of diverse post-translational peptide-modifying enzymes in Escherichia coli under uniform expression and purification conditions | 1.5 | 12 | Citations (PDF) |
| 21 | Merging enzymatic and synthetic chemistry with computational synthesis planning | 10.8 | 72 | Citations (PDF) |
| 22 | Parallel engineering of environmental bacteria and performance over years under jungle-simulated conditions | 1.5 | 10 | Citations (PDF) |
| 23 | Nanoliter scale electrochemistry of natural and engineered electroactive bacteria | 3.5 | 18 | Citations (PDF) |
| 24 | Genetic Tuning of Iron Oxide Nanoparticle Size, Shape, and Surface Properties in Magnetospirillum magneticum | 11.9 | 26 | Citations (PDF) |
| 25 | An absorbance method for analysis of enzymatic degradation kinetics of poly(ethylene terephthalate) films | 2.7 | 128 | Citations (PDF) |
| 26 | Single-cell measurement of plasmid copy number and promoter activity | 10.8 | 99 | Citations (PDF) |
| 27 | Gut-inhabiting Clostridia build human GPCR ligands by conjugating neurotransmitters with diet- and human-derived fatty acids | 9.9 | 71 | Citations (PDF) |
| 28 | Genetic Control of Aerogel and Nanofoam Properties, Applied to Ni–MnOx Cathode Design | 11.9 | 14 | Citations (PDF) |
| 29 | Coculture of primary human colon monolayer with human gut bacteria | 10.6 | 70 | Citations (PDF) |
| 30 | Rapid and simultaneous screening of pathway designs and chassis organisms, applied to engineered living materials | 5.3 | 16 | Citations (PDF) |
| 31 | Four-Step Pathway from Phenylpyruvate to Benzylamine, an Intermediate to the High-Energy Propellant CL-20 | 3.0 | 6 | Citations (PDF) |
| 32 | Genetically modifying skin microbe to produce violacein and augmenting microbiome did not defend Panamanian golden frogs from disease | 3.8 | 27 | Citations (PDF) |
| 33 | Competitive dCas9 binding as a mechanism for transcriptional control | 3.6 | 35 | Citations (PDF) |
| 34 | Selection for constrained peptides that bind to a single target protein | 10.8 | 27 | Citations (PDF) |
| 35 | A synthetic distributed genetic multi-bit counter | 2.4 | 12 | Citations (PDF) |
| 36 | Engineering living and regenerative fungal–bacterial biocomposite structures | 23.7 | 144 | Citations (PDF) |
| 37 | Genetic Encoding of Targeted Magnetic Resonance Imaging Contrast Agents for Tumor Imaging | 3.0 | 27 | Citations (PDF) |
| 38 | Hybrid Living Materials: Digital Design and Fabrication of 3D Multimaterial Structures with Programmable Biohybrid Surfaces | 11.9 | 72 | Citations (PDF) |
| 39 | Genetic circuit characterization by inferring RNA polymerase movement and ribosome usage | 10.8 | 66 | Citations (PDF) |
| 40 | Genetic circuit design automation for yeast | 9.9 | 147 | Citations (PDF) |
| 41 | Genetic Circuit Dynamics: Hazard and Glitch Analysis | 3.0 | 27 | Citations (PDF) |
| 42 | Activation of Protein Expression in Electroactive Biofilms | 3.0 | 15 | Citations (PDF) |
| 43 | Silica Nanostructures Produced Using Diatom Peptides with Designed Post‐Translational Modifications | 11.9 | 41 | Citations (PDF) |
| 44 | Genetic circuit design automation for the gut resident species Bacteroides thetaiotaomicron | 19.7 | 123 | Citations (PDF) |
| 45 | Distributed Implementation of Boolean Functions by Transcriptional Synthetic Circuits | 3.0 | 29 | Citations (PDF) |
| 46 | Engineering a DNAzyme-Based Operon System for the Production of DNA Nanoscaffolds in Living Bacteria | 3.0 | 18 | Citations (PDF) |
| 47 | P
recision design of stable genetic circuits carried in highly‐insulated
E. coli
genomic landing pads | 3.6 | 74 | Citations (PDF) |
| 48 | Communicating Structure and Function in Synthetic Biology Diagrams | 3.0 | 42 | Citations (PDF) |
| 49 | Synthetic Biology Open Language Visual (SBOL Visual) Version 2.1 | 0.7 | 10 | Citations (PDF) |
| 50 | Light‐Controlled, High‐Resolution Patterning of Living Engineered Bacteria Onto Textiles, Ceramics, and Plastic | 11.9 | 113 | Citations (PDF) |
| 51 | Retrosynthetic design of metabolic pathways to chemicals not found in nature | 1.2 | 107 | Citations (PDF) |
| 52 | Organism Engineering for the Bioproduction of the Triaminotrinitrobenzene (TATB) Precursor Phloroglucinol (PG) | 3.0 | 22 | Citations (PDF) |
| 53 | Biosynthesis of the nitrogenase active-site cofactor precursor NifB-co in
Saccharomyces cerevisiae | 5.2 | 53 | Citations (PDF) |
| 54 | Bacterial terpene biosynthesis: challenges and opportunities for pathway engineering | 1.6 | 126 | Citations (PDF) |
| 55 | Engineering orthogonal signalling pathways reveals the sparse occupancy of sequence space | 30.7 | 80 | Citations (PDF) |
| 56 | Control of nitrogen fixation in bacteria that associate with cereals | 9.9 | 218 | Citations (PDF) |
| 57 | Resilient living materials built by printing bacterial spores | 9.1 | 232 | Citations (PDF) |
| 58 | A Pressure Test to Make 10 Molecules in 90 Days: External Evaluation of Methods to Engineer Biology | 11.7 | 141 | Citations (PDF) |
| 59 | Engineered promoters enable constant gene expression at any copy number in bacteria | 19.7 | 182 | Citations (PDF) |
| 60 | Cellular checkpoint control using programmable sequential logic | 26.1 | 121 | Citations (PDF) |
| 61 | Synthetic Biology Open Language Visual (SBOL Visual) Version 2.0 | 0.7 | 26 | Citations (PDF) |
| 62 | Iterative algorithm-guided design of massive strain libraries, applied to itaconic acid production in yeast | 5.3 | 70 | Citations (PDF) |
| 63 | Engineered integrative and conjugative elements for efficient and inducible DNA transfer to undomesticated bacteria | 9.9 | 206 | Citations (PDF) |
| 64 | Deep learning to predict the lab-of-origin of engineered DNA | 10.8 | 69 | Citations (PDF) |
| 65 | Escherichia coli “Marionette” strains with 12 highly optimized small-molecule sensors | 9.1 | 557 | Citations (PDF) |
| 66 | Discovery of Reactive Microbiota-Derived Metabolites that Inhibit Host ProteasesCell, 2017, 168, 517-526.e18 | 23.4 | 205 | Citations (PDF) |
| 67 | Formation of Nitrogenase NifDK Tetramers in the Mitochondria of Saccharomyces cerevisiae | 3.0 | 83 | Citations (PDF) |
| 68 | Control of type III protein secretion using a minimal genetic system | 10.8 | 67 | Citations (PDF) |
| 69 | Engineering RGB color vision into Escherichia coli | 9.1 | 194 | Citations (PDF) |
| 70 | Genetic Design via Combinatorial Constraint Specification | 3.0 | 18 | Citations (PDF) |
| 71 | Genetic circuit characterization and debugging using
RNA
‐seq | 3.6 | 96 | Citations (PDF) |
| 72 | DNAplotlib: Programmable Visualization of Genetic Designs and Associated Data | 3.0 | 58 | Citations (PDF) |
| 73 | Balancing gene expression without library construction via a reusable sRNA pool | 10.7 | 71 | Citations (PDF) |
| 74 | Genetic circuit design automation | 26.1 | 1,068 | Citations (PDF) |
| 75 | Symbiotic Nitrogen Fixation and the Challenges to Its Extension to Nonlegumes | 2.4 | 593 | Citations (PDF) |
| 76 | Double Dutch: A Tool for Designing Combinatorial Libraries of Biological Systems | 3.0 | 36 | Citations (PDF) |
| 77 | Genetic encoding of DNA nanostructures and their self-assembly in living bacteria | 10.8 | 77 | Citations (PDF) |
| 78 | Post-translational control of genetic circuits usingPotyvirusproteases | 10.7 | 87 | Citations (PDF) |
| 79 | Synthetic biology to access and expand nature's chemical diversity | 58.2 | 474 | Citations (PDF) |
| 80 | DNA Assembly in 3D Printed Fluidics | 1.5 | 45 | Citations (PDF) |
| 81 | Targeted DNA degradation using a CRISPR device stably carried in the host genome | 10.8 | 174 | Citations (PDF) |
| 82 | Memory and Combinatorial Logic Based on DNA Inversions: Dynamics and Evolutionary Stability | 3.0 | 51 | Citations (PDF) |
| 83 | Algorithmic co-optimization of genetic constructs and growth conditions: application to 6-ACA, a potential nylon-6 precursor | 10.7 | 56 | Citations (PDF) |
| 84 | Use of plant colonizing bacteria as chassis for transfer of N2-fixation to cereals | 4.7 | 110 | Citations (PDF) |
| 85 | Programming a Human Commensal Bacterium, Bacteroides thetaiotaomicron, to Sense and Respond to Stimuli in the Murine Gut Microbiota | 3.5 | 354 | Citations (PDF) |
| 86 | A Framework for Genetic Logic Synthesis | 8.6 | 26 | Citations (PDF) |
| 87 | Functional optimization of gene clusters by combinatorial design and assembly | 19.7 | 355 | Citations (PDF) |
| 88 | Multi‐input
CRISPR
/
C
as genetic circuits that interface host regulatory networks | 3.6 | 259 | Citations (PDF) |
| 89 | Realizing the potential of synthetic biology | 69.0 | 233 | Citations (PDF) |
| 90 | Principles of genetic circuit design | 13.1 | 978 | Citations (PDF) |
| 91 | Systematic Transfer of Prokaryotic Sensors and Circuits to Mammalian Cells | 3.0 | 89 | Citations (PDF) |
| 92 | A ‘resource allocator’ for transcription based on a highly fragmented T7
RNA
polymerase | 3.6 | 201 | Citations (PDF) |
| 93 | Permanent genetic memory with >1-byte capacity | 13.1 | 258 | Citations (PDF) |
| 94 | Genetic Sensor for Strong Methylating Compounds | 3.0 | 32 | Citations (PDF) |
| 95 | Advances in genetic circuit design: novel biochemistries, deep part mining, and precision gene expression | 4.6 | 147 | Citations (PDF) |
| 96 | Characterization of 582 natural and synthetic terminators and quantification of their design constraints | 13.1 | 527 | Citations (PDF) |
| 97 | Design of orthogonal genetic switches based on a crosstalk map of σs, anti‐σs, and promoters | 3.6 | 183 | Citations (PDF) |
| 98 | Genomic mining of prokaryotic repressors for orthogonal logic gates | 9.1 | 392 | Citations (PDF) |
| 99 | Modular control of multiple pathways using engineered orthogonal T7 polymerases | 10.7 | 202 | Citations (PDF) |
| 100 | Ribozyme-based insulator parts buffer synthetic circuits from genetic context | 19.7 | 426 | Citations (PDF) |
| 101 | Genetic Circuit Performance under Conditions Relevant for Industrial Bioreactors | 3.0 | 112 | Citations (PDF) |
| 102 | Refactoring the nitrogen fixation gene cluster fromKlebsiella oxytoca | 5.2 | 404 | Citations (PDF) |
| 103 | Genetic programs constructed from layered logic gates in single cells | 30.7 | 724 | Citations (PDF) |
| 104 | Multichromatic Control of Gene Expression in Escherichia coli | 2.9 | 268 | Citations (PDF) |
| 105 | Construction of a Genetic Multiplexer to Toggle between Chemosensory Pathways in Escherichia coli | 2.9 | 65 | Citations (PDF) |
| 106 | Synthesis of three advanced biofuels from ionic liquid-pretreated switchgrass using engineered
Escherichia coli | 5.2 | 357 | Citations (PDF) |
| 107 | Characterization of combinatorial patterns generated by multiple two‐component sensors in E. coli that respond to many stimuli | 2.7 | 47 | Citations (PDF) |
| 108 | Prokaryotic gene clusters: A rich toolbox for synthetic biology | 2.4 | 75 | Citations (PDF) |
| 109 | Programming cells: towards an automated ‘Genetic Compiler’ | 4.7 | 80 | Citations (PDF) |
| 110 | Quantification of the physiochemical constraints on the export of spider silk proteins by Salmonella type III secretion | 3.6 | 19 | Citations (PDF) |
| 111 | Robust multicellular computing using genetically encoded NOR gates and chemical ‘wires’ | 30.7 | 862 | Citations (PDF) |
| 112 | Engineering the
Salmonella
type III secretion system to export spider silk monomers | 3.6 | 152 | Citations (PDF) |
| 113 | Spatiotemporal control of cell signalling using a light-switchable protein interaction | 30.7 | 1,012 | Citations (PDF) |
| 114 | Automated design of synthetic ribosome binding sites to control protein expression | 19.7 | 1,847 | Citations (PDF) |
| 115 | A Synthetic Genetic Edge Detection ProgramCell, 2009, 137, 1272-1281 | 23.4 | 466 | Citations (PDF) |
| 116 | Kinetic Buffering of Cross Talk between Bacterial Two-Component Sensors | 2.9 | 94 | Citations (PDF) |
| 117 | Synthesis of Methyl Halides from Biomass Using Engineered Microbes | 11.7 | 239 | Citations (PDF) |
| 118 | Induction and Relaxation Dynamics of the Regulatory Network Controlling the Type III Secretion System Encoded within Salmonella Pathogenicity Island 1 | 2.9 | 53 | Citations (PDF) |
| 119 | Environmental signal integration by a modular AND gate | 3.6 | 334 | Citations (PDF) |
| 120 | Environmentally Controlled Invasion of Cancer Cells by Engineered Bacteria | 2.9 | 571 | Citations (PDF) |
| 121 | Genetic parts to program bacteria | 4.7 | 226 | Citations (PDF) |
| 122 | Engineering Escherichia coli to see light | 30.7 | 620 | Citations (PDF) |
| 123 | The Bacillus subtilis sin Operon | 3.3 | 63 | Citations (PDF) |
| 124 | Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration | 10.7 | 39 | Citations (PDF) |
| 125 | Registry in a tube: multiplexed pools of retrievable parts for genetic design space exploration | 10.7 | 11 | Citations (PDF) |
| 126 | Engineered dCas9 with reduced toxicity in bacteria: implications for genetic circuit design | 10.7 | 145 | Citations (PDF) |
| 127 | Hyperspectral reporters for long-distance and wide-area detection of gene expression in living bacteria | 19.7 | 26 | Citations (PDF) |
| 128 | Synthetic Biology of Plants and Microbes for Agriculture, Environment, and Future Applications | 42.5 | 17 | Citations (PDF) |
| 129 | Protecting cells at the genetic level and simulating unauthorized access via a biohackathon | 8.1 | 1 | Citations (PDF) |
| 130 | Consumption of the degradation products of nylon 6 and nylon 6,6 as the sole carbon and nitrogen source by engineered Acinetobacter baylyi | 5.3 | 0 | Citations (PDF) |
| 131 | Responsible biotechnology: an analysis of the Asilomar 2025 entreaties | 6.6 | 0 | Citations (PDF) |
| 132 | Living circuit boards built by printing bacterial transistors | 9.1 | 0 | Citations (PDF) |
