| 1 | Asymmetric genome merging leads to gene expression novelty through nucleo‐cytoplasmic disruptions and transcriptomic shock in <i>Chlamydomonas</i> triploids | 8.1 | 3 | Citations (PDF) |
| 2 | Flavonoids and anthocyanins in seagrasses: implications for climate change adaptation and resilience | 4.1 | 5 | Citations (PDF) |
| 3 | Expanding the toolkit for ploidy manipulation in
<i>Chlamydomonas reinhardtii</i> | 8.1 | 1 | Citations (PDF) |
| 4 | The subordinate role of pseudogenization to recombinative deletion following polyploidization in angiosperms | 13.7 | 3 | Citations (PDF) |
| 5 | Genome analyses provide insights into Engelhardia’s adaptation to East Asia summer monsoon | 5.1 | 3 | Citations (PDF) |
| 6 | Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment | 11.4 | 43 | Citations (PDF) |
| 7 | High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar | 5.5 | 36 | Citations (PDF) |
| 8 | Convergent and/or parallel evolution of <scp>RNA</scp>‐binding proteins in angiosperms after polyploidization | 8.1 | 16 | Citations (PDF) |
| 9 | How temperature modulates the expression of pathogenesis-related molecules of the cross-kingdom pathogen Lasiodiplodia hormozganensis | 8.4 | 5 | Citations (PDF) |
| 10 | Interspecific transfer of genetic information through polyploid bridges | 7.5 | 18 | Citations (PDF) |
| 11 | <scp>hybridexpress</scp>: an R/Bioconductor package for comparative transcriptomic analyses of hybrids and their progenitors | 8.1 | 7 | Citations (PDF) |
| 12 | The immediate metabolomic effects of whole‐genome duplication in the greater duckweed, <i>Spirodela polyrhiza</i> | 2.2 | 3 | Citations (PDF) |
| 13 | A metabolic perspective on polyploid invasion and the emergence of life histories: Insights from a mechanistic model | 2.2 | 4 | Citations (PDF) |
| 14 | Dosage sensitivity shapes balanced expression and gene longevity of homoeologs after whole-genome duplications in angiosperms | 7.6 | 8 | Citations (PDF) |
| 15 | Revisiting ancient polyploidy in leptosporangiate ferns | 8.1 | 19 | Citations (PDF) |
| 16 | The genome of the king protea, <i>Protea cynaroides</i> | 6.2 | 11 | Citations (PDF) |
| 17 | The immediate effects of polyploidization of<i>Spirodela polyrhiza</i>change in a strain-specific way along environmental gradients | 2.9 | 19 | Citations (PDF) |
| 18 | Cutaneous transcriptomic profiling and candidate pigment genes in the wild discus (
<i>Symphysodon</i>
spp.) | 0.9 | 4 | Citations (PDF) |
| 19 | Pigmentation enhancement techniques during ornamental fish production | 3.2 | 12 | Citations (PDF) |
| 20 | A panoramic view of the genomic landscape of the genus Streptomyces | 2.0 | 20 | Citations (PDF) |
| 21 | A Cas3-base editing tool for targetable in vivo mutagenesis | 13.7 | 38 | Citations (PDF) |
| 22 | Genomic Insights into Adaptation to Karst Limestone and Incipient Speciation in East Asian <i>Platycarya</i> spp. (Juglandaceae) | 4.7 | 24 | Citations (PDF) |
| 23 | Whole-genome Duplications and the Long-term Evolution of Gene Regulatory Networks in Angiosperms | 4.7 | 34 | Citations (PDF) |
| 24 | The duplication of genomes and genetic networks and its potential for evolutionary adaptation and survival during environmental turmoil | 7.5 | 42 | Citations (PDF) |
| 25 | Assessing the quality of comparative genomics data and results with the <i>cogeqc</i> R/Bioconductor package | 5.2 | 7 | Citations (PDF) |
| 26 | Origin and evolution of the triploid cultivated banana genome | 25.2 | 42 | Citations (PDF) |
| 27 | Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants | 3.2 | 33 | Citations (PDF) |
| 28 | The Neighborhood of the Spike Gene Is a Hotspot for Modular Intertypic Homologous and Nonhomologous Recombination in Coronavirus Genomes | 4.7 | 42 | Citations (PDF) |
| 29 | Application of second-generation sequencing (SGS) and third generation sequencing (TGS) in aquaculture breeding program | 3.9 | 35 | Citations (PDF) |
| 30 | Nearby transposable elements impact plant stress gene regulatory networks: a meta-analysis in A. thaliana and S. lycopersicum | 3.3 | 53 | Citations (PDF) |
| 31 | Genomes shed light on the evolution of <i>Begonia</i>, a mega‐diverse genus | 8.1 | 37 | Citations (PDF) |
| 32 | Divergence of active site motifs among different classes of <i>Populus</i> glutaredoxins results in substrate switches | 6.2 | 11 | Citations (PDF) |
| 33 | The genome of <i>Hibiscus hamabo</i> reveals its adaptation to saline and waterlogged habitat | 7.2 | 22 | Citations (PDF) |
| 34 | MicroRNA-mediated post-transcriptional regulation of Pinus pinaster response and resistance to pinewood nematode | 3.4 | 14 | Citations (PDF) |
| 35 | Reshuffling of the ancestral core-eudicot genome shaped chromatin topology and epigenetic modification in Panax | 13.7 | 67 | Citations (PDF) |
| 36 | Genomic and Metabolomic Analyses of the Marine Fungus Emericellopsis cladophorae: Insights into Saltwater Adaptability Mechanisms and Its Biosynthetic Potential | 3.5 | 35 | Citations (PDF) |
| 37 | The Cycas genome and the early evolution of seed plants | 11.4 | 175 | Citations (PDF) |
| 38 | The <i>Larix kaempferi</i> genome reveals new insights into wood properties | 8.9 | 49 | Citations (PDF) |
| 39 | Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy | 11.4 | 81 | Citations (PDF) |
| 40 | The genome of <i>Corydalis</i> reveals the evolution of benzylisoquinoline alkaloid biosynthesis in Ranunculales | 6.2 | 42 | Citations (PDF) |
| 41 | A functionally conserved STORR gene fusion in Papaver species that diverged 16.8 million years ago | 13.7 | 16 | Citations (PDF) |
| 42 | Cultivated hawthorn (<i>Crataegus pinnatifida</i> var. major) genome sheds light on the evolution of Maleae (apple tribe) | 8.9 | 43 | Citations (PDF) |
| 43 | SNP Detection in Pinus pinaster Transcriptome and Association with Resistance to Pinewood Nematode | 2.2 | 2 | Citations (PDF) |
| 44 | Chromosome‐scale assembly of the <i>Moringa oleifera</i> Lam. genome uncovers polyploid history and evolution of secondary metabolism pathways through tandem duplication | 3.3 | 19 | Citations (PDF) |
| 45 | Evolutionary divergence of duplicated genomes in newly described allotetraploid cottons | 7.5 | 64 | Citations (PDF) |
| 46 | The emergence and evolution of intron‐poor and intronless genes in intron‐rich plant gene families | 6.2 | 139 | Citations (PDF) |
| 47 | Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (<i>Digitaria exilis</i>) | 3.2 | 41 | Citations (PDF) |
| 48 | Improved chromosome-level genome assembly and annotation of the seagrass, Zostera marina (eelgrass) | 0.5 | 49 | Citations (PDF) |
| 49 | Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle | 3.3 | 14 | Citations (PDF) |
| 50 | First draft genome assembly of the desert locust, Schistocerca gregaria | 0.5 | 29 | Citations (PDF) |
| 51 | Divergence of a genomic island leads to the evolution of melanization in a halophyte root fungus | 9.1 | 19 | Citations (PDF) |
| 52 | Wolfberry genomes and the evolution of Lycium (Solanaceae) | 4.4 | 82 | Citations (PDF) |
| 53 | A chromosome‐level<i>Amaranthus cruentus</i>genome assembly highlights gene family evolution and biosynthetic gene clusters that may underpin the nutritional value of this traditional crop | 6.2 | 53 | Citations (PDF) |
| 54 | Insights Into the Mechanisms Implicated in Pinus pinaster Resistance to Pinewood Nematode | 4.1 | 37 | Citations (PDF) |
| 55 | Whole-genome microsynteny-based phylogeny of angiosperms | 13.7 | 103 | Citations (PDF) |
| 56 | The Welwitschia genome reveals a unique biology underpinning extreme longevity in deserts | 13.7 | 84 | Citations (PDF) |
| 57 | Genome‐wide analysis of butterfly bush (<i>Buddleja alternifolia</i>) in three uplands provides insights into biogeography, demography and speciation | 8.1 | 35 | Citations (PDF) |
| 58 | Haplotype-resolved genome assembly and allele-specific gene expression in cultivated ginger | 7.2 | 52 | Citations (PDF) |
| 59 | The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments | 3.3 | 35 | Citations (PDF) |
| 60 | Chromosome-scale assembly and evolution of the tetraploid Salvia splendens (Lamiaceae) genome | 7.2 | 49 | Citations (PDF) |
| 61 | The <i>Euscaphis japonica</i> genome and the evolution of malvids | 6.2 | 9 | Citations (PDF) |
| 62 | Genomic Resources to Guide Improvement of the Shea Tree | 4.1 | 26 | Citations (PDF) |
| 63 | Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp | 3.9 | 179 | Citations (PDF) |
| 64 | Polyploidy: an evolutionary and ecological force in stressful times | 7.6 | 613 | Citations (PDF) |
| 65 | Taxus yunnanensis genome offers insights into gymnosperm phylogeny and taxol production | 4.4 | 44 | Citations (PDF) |
| 66 | Evolutionary history and pan-genome dynamics of strawberry (
<i>Fragaria</i>
spp.) | 7.5 | 90 | Citations (PDF) |
| 67 | The Cymbidium genome reveals the evolution of unique morphological traits | 7.2 | 68 | Citations (PDF) |
| 68 | Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis | 3.5 | 15 | Citations (PDF) |
| 69 | Evolution of NLR Resistance Genes in Magnoliids: Dramatic Expansions of CNLs and Multiple Losses of TNLs | 4.1 | 20 | Citations (PDF) |
| 70 | Sequencing and Analyzing the Transcriptomes of a Thousand Species Across the Tree of Life for Green Plants | 24.5 | 54 | Citations (PDF) |
| 71 | Draft Genomes of Two Artocarpus Plants, Jackfruit (A. heterophyllus) and Breadfruit (A. altilis) | 2.5 | 41 | Citations (PDF) |
| 72 | The Seagrass Methylome Is Associated With Variation in Photosynthetic Performance Among Clonal Shoots | 4.1 | 35 | Citations (PDF) |
| 73 | Chromosome-level genome assembly of a parent species of widely cultivated azaleas | 13.7 | 150 | Citations (PDF) |
| 74 | Nymphaea colorata (Blue-Petal Water Lily) | 9.8 | 4 | Citations (PDF) |
| 75 | Model-Based Detection of Whole-Genome Duplications in a Phylogeny | 4.7 | 11 | Citations (PDF) |
| 76 | Multi-proxy analyses of a mid-15th century Middle Iron Age Bantu-speaker palaeo-faecal specimen elucidates the configuration of the ‘ancestral’ sub-Saharan African intestinal microbiome | 11.5 | 22 | Citations (PDF) |
| 77 | Polyploidy breaks speciation barriers in Australian burrowing frogs Neobatrachus | 3.2 | 55 | Citations (PDF) |
| 78 | Phages Actively Challenge Niche Communities in Antarctic Soils | 4.4 | 29 | Citations (PDF) |
| 79 | Multi-faceted analysis provides little evidence for recurrent whole-genome duplications during hexapod evolution | 3.9 | 29 | Citations (PDF) |
| 80 | The genome of Prasinoderma coloniale unveils the existence of a third phylum within green plants | 9.6 | 135 | Citations (PDF) |
| 81 | The honeysuckle genome provides insight into the molecular mechanism of carotenoid metabolism underlying dynamic flower coloration | 8.1 | 109 | Citations (PDF) |
| 82 | The Litsea genome and the evolution of the laurel family | 13.7 | 121 | Citations (PDF) |
| 83 | The hornwort genome and early land plant evolution | 11.4 | 293 | Citations (PDF) |
| 84 | Distinct Expression and Methylation Patterns for Genes with Different Fates following a Single Whole-Genome Duplication in Flowering Plants | 4.7 | 103 | Citations (PDF) |
| 85 | Virus-host coexistence in phytoplankton through the genomic lens | 10.9 | 46 | Citations (PDF) |
| 86 | De novo Assembly of Transcriptomes From a B73 Maize Line Introgressed With a QTL for Resistance to Gray Leaf Spot Disease Reveals a Candidate Allele of a Lectin Receptor-Like Kinase | 4.1 | 10 | Citations (PDF) |
| 87 | The evolutionary origin and domestication history of goldfish (
<i>Carassius auratus</i>
) | 7.5 | 90 | Citations (PDF) |
| 88 | First draft genome assembly of the desert locust, Schistocerca gregaria | 0.5 | 45 | Citations (PDF) |
| 89 | First draft genome assembly of the Argane tree (Argania spinosa) | 0.5 | 12 | Citations (PDF) |
| 90 | Small RNA profiling in Pinus pinaster reveals the transcriptome of developing seeds and highlights differences between zygotic and somatic embryos | 3.4 | 36 | Citations (PDF) |
| 91 | Using digital organisms to study the evolutionary consequences of whole genome duplication and polyploidy | 2.3 | 36 | Citations (PDF) |
| 92 | The Rhododendron Genome and Chromosomal Organization Provide Insight into Shared Whole-Genome Duplications across the Heath Family (Ericaceae) | 2.4 | 63 | Citations (PDF) |
| 93 | A genomic analysis and transcriptomic atlas of gene expression in Psoroptes ovis reveals feeding- and stage-specific patterns of allergen expression | 3.3 | 19 | Citations (PDF) |
| 94 | A multi-omics analysis of the grapevine pathogen Lasiodiplodia theobromae reveals that temperature affects the expression of virulence- and pathogenicity-related genes | 3.4 | 62 | Citations (PDF) |
| 95 | Genome sequence of<i>Malania oleifera</i>, a tree with great value for nervonic acid production | 3.2 | 48 | Citations (PDF) |
| 96 | Multiple Independent Recruitment of Sodefrin Precursor-Like Factors in Anuran Sexually Dimorphic Glands | 4.7 | 29 | Citations (PDF) |
| 97 | Illumina error correction near highly repetitive DNA regions improves de novo genome assembly | 3.0 | 28 | Citations (PDF) |
| 98 | Loss of Wood Formation Genes in Monocot Genomes | 2.4 | 28 | Citations (PDF) |
| 99 | Inference of Ancient Whole-Genome Duplications and the Evolution of Gene Duplication and Loss Rates | 4.7 | 85 | Citations (PDF) |
| 100 | Genome of
<i>Crucihimalaya himalaica</i>
, a close relative of
<i>Arabidopsis</i>
, shows ecological adaptation to high altitude | 7.5 | 142 | Citations (PDF) |
| 101 | The Genome of the Fungal Pathogen<i>Verticillium dahliae</i>Reveals Extensive Bacterial to Fungal Gene Transfer | 2.4 | 22 | Citations (PDF) |
| 102 | Pseudo-chromosome–length genome assembly of a double haploid “Bartlett” pear (Pyrus communis L.) | 3.2 | 112 | Citations (PDF) |
| 103 | ORCAE-AOCC: A Centralized Portal for the Annotation of African Orphan Crop Genomes | 2.5 | 13 | Citations (PDF) |
| 104 | Dual RNA Sequencing of Vitis vinifera during Lasiodiplodia theobromae Infection Unveils Host–Pathogen Interactions | 4.4 | 36 | Citations (PDF) |
| 105 | Applications of Next-Generation Sequencing Technologies and Computational Tools in Molecular Evolution and Aquatic Animals Conservation Studies: A Short Review | 1.3 | 22 | Citations (PDF) |
| 106 | The draft genomes of five agriculturally important African orphan crops | 3.2 | 141 | Citations (PDF) |
| 107 | Mining the Enriched Subgraphs for Specific Vertices in a Biological Graph | 2.9 | 7 | Citations (PDF) |
| 108 | Genomes of early-diverging streptophyte algae shed light on plant terrestrialization | 11.4 | 202 | Citations (PDF) |
| 109 | The water lily genome and the early evolution of flowering plants | 37.9 | 341 | Citations (PDF) |
| 110 | Polyploid Arabidopsis species originated around recent glaciation maxima | 7.2 | 81 | Citations (PDF) |
| 111 | A genome for gnetophytes and early evolution of seed plants | 11.4 | 186 | Citations (PDF) |
| 112 | PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics | 15.5 | 505 | Citations (PDF) |
| 113 | BrownieAligner: accurate alignment of Illumina sequencing data to de Bruijn graphs | 3.0 | 26 | Citations (PDF) |
| 114 | Functional and evolutionary genomic inferences in
<i>Populus</i>
through genome and population sequencing of American and European aspen | 7.5 | 108 | Citations (PDF) |
| 115 | Insights into the Evolution of Multicellularity from the Sea Lettuce Genome | 3.6 | 185 | Citations (PDF) |
| 116 | Gene cluster conservation provides insight into cercosporin biosynthesis and extends production to the genus
<i>Colletotrichum</i> | 7.5 | 84 | Citations (PDF) |
| 117 | Fern genomes elucidate land plant evolution and cyanobacterial symbioses | 11.4 | 501 | Citations (PDF) |
| 118 | Network Modeling Unravels Mechanisms of Crosstalk between Ethylene and Salicylate Signaling in Potato | 5.5 | 40 | Citations (PDF) |
| 119 | Function, dynamics and evolution of network motif modules in integrated gene regulatory networks of worm and plant | 15.5 | 48 | Citations (PDF) |
| 120 | MorphDB: Prioritizing Genes for Specialized Metabolism Pathways and Gene Ontology Categories in Plants | 4.1 | 8 | Citations (PDF) |
| 121 | Agulhas Current properties shape microbial community diversity and potential functionality | 3.4 | 21 | Citations (PDF) |
| 122 | The ‘TranSeq’ 3′‐end sequencing method for high‐throughput transcriptomics and gene space refinement in plant genomes | 6.2 | 26 | Citations (PDF) |
| 123 | The Chara Genome: Secondary Complexity and Implications for Plant TerrestrializationCell, 2018, 174, 448-464.e24 | 33.7 | 528 | Citations (PDF) |
| 124 | A reservoir of ‘historical’ antibiotic resistance genes in remote pristine Antarctic soils | 11.5 | 341 | Citations (PDF) |
| 125 | wgd—simple command line tools for the analysis of ancient whole-genome duplications | 4.7 | 257 | Citations (PDF) |
| 126 | First draft genome assembly of the Argane tree (Argania spinosa) | 0.5 | 9 | Citations (PDF) |
| 127 | A Cytoscape app for motif enumeration with ISMAGS | 4.7 | 27 | Citations (PDF) |
| 128 | Network-based integration of systems genetics data reveals pathways associated with lignocellulosic biomass accumulation and processing | 7.5 | 60 | Citations (PDF) |
| 129 | The evolutionary significance of polyploidy | 47.0 | 1,744 | Citations (PDF) |
| 130 | OMSim: a simulator for optical map data | 4.7 | 16 | Citations (PDF) |
| 131 | Single-Copy Genes as Molecular Markers for Phylogenomic Studies in Seed Plants | 2.4 | 98 | Citations (PDF) |
| 132 | The gene expression landscape of pine seedling tissues | 6.2 | 47 | Citations (PDF) |
| 133 | Coordinated Functional Divergence of Genes after Genome Duplication in <i>Arabidopsis thaliana</i> | 7.6 | 62 | Citations (PDF) |
| 134 | Draft Genome Sequences of Two Unclassified Bacteria,
<i>Sphingomonas</i>
sp. Strains IBVSS1 and IBVSS2, Isolated from Environmental Samples | 0.7 | 1 | Citations (PDF) |
| 135 | Genome of wild olive and the evolution of oil biosynthesis | 7.5 | 287 | Citations (PDF) |
| 136 | Draft Genome Sequences of Two Unclassified
<i>Chitinophagaceae</i>
Bacteria, IBVUCB1 and IBVUCB2, Isolated from Environmental Samples | 0.7 | 1 | Citations (PDF) |
| 137 | Reciprocally Retained Genes in the Angiosperm Lineage Show the Hallmarks of Dosage Balance Sensitivity | 7.6 | 102 | Citations (PDF) |
| 138 | Revisiting ancestral polyploidy in plants | 10.9 | 92 | Citations (PDF) |
| 139 | The Apostasia genome and the evolution of orchids | 37.9 | 388 | Citations (PDF) |
| 140 | Conservation of Nonsense-Mediated mRNA Decay Complex Components Throughout Eukaryotic Evolution | 3.4 | 43 | Citations (PDF) |
| 141 | Contrasting Rates of Molecular Evolution and Patterns of Selection among Gymnosperms and Flowering Plants | 4.7 | 217 | Citations (PDF) |
| 142 | Systems genetics reveals a transcriptional network associated with susceptibility in the maize–grey leaf spot pathosystem | 6.2 | 54 | Citations (PDF) |
| 143 | Re‐annotation, improved large‐scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga <i>Ectocarpus</i> | 8.1 | 85 | Citations (PDF) |
| 144 | Estimating the total number of phosphoproteins and phosphorylation sites in eukaryotic proteomes | 3.2 | 697 | Citations (PDF) |
| 145 | Draft Genome Sequences of Two Unclassified Bacteria,
Hydrogenophaga
sp. Strains IBVHS1 and IBVHS2, Isolated from Environmental Samples | 0.7 | 0 | Citations (PDF) |
| 146 | Draft genome of Cercospora zeina, Fusarium pininemorale, Hawksworthiomyces lignivorus, Huntiella decipiens and Ophiostoma ips | 4.7 | 44 | Citations (PDF) |
| 147 | Evaluation of the impact of Illumina error correction tools on de novo genome assembly | 3.0 | 54 | Citations (PDF) |
| 148 | The sociobiology of genes: the gene’s eye view as a unifying behavioural-ecological framework for biological evolution | 0.6 | 2 | Citations (PDF) |
| 149 | Evidence for an ancient whole genome duplication in the cycad lineage | 2.3 | 41 | Citations (PDF) |
| 150 | Cell line name recognition in support of the identification of synthetic lethality in cancer from text | 4.7 | 23 | Citations (PDF) |
| 151 | CoExpNetViz: Comparative Co-Expression Networks Construction and Visualization Tool | 4.1 | 113 | Citations (PDF) |
| 152 | Lack of GLYCOLATE OXIDASE1, but Not GLYCOLATE OXIDASE2, Attenuates the Photorespiratory Phenotype of CATALASE2-Deficient Arabidopsis | 5.5 | 112 | Citations (PDF) |
| 153 | Complex Evolutionary Dynamics of Massively Expanded Chemosensory Receptor Families in an Extreme Generalist Chelicerate Herbivore | 2.4 | 53 | Citations (PDF) |
| 154 | Comparative Metagenomic Analysis Reveals Mechanisms for Stress Response in Hypoliths from Extreme Hyperarid Deserts | 2.4 | 67 | Citations (PDF) |
| 155 | The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution | 3.4 | 301 | Citations (PDF) |
| 156 | Transcriptomic responses of a simplified soil microcosm to a plant pathogen and its biocontrol agent reveal a complex reaction to harsh habitat | 3.3 | 14 | Citations (PDF) |
| 157 | RNA-sequencing of Cercospora beticola DMI-sensitive and -resistant isolates after treatment with tetraconazole identifies common and contrasting pathway induction | 2.1 | 44 | Citations (PDF) |
| 158 | Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks | 3.0 | 31 | Citations (PDF) |
| 159 | Jabba: hybrid error correction for long sequencing reads | 1.2 | 73 | Citations (PDF) |
| 160 | The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea | 37.9 | 555 | Citations (PDF) |
| 161 | Of dups and dinos: evolution at the K/Pg boundary | 7.2 | 79 | Citations (PDF) |
| 162 | Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms | 7.6 | 244 | Citations (PDF) |
| 163 | Complete mitochondrial genome of the Verticillium-wilt causing plant pathogen Verticillium nonalfalfae | 2.3 | 25 | Citations (PDF) |
| 164 | Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis | 3.0 | 8 | Citations (PDF) |
| 165 | Exploration of alternative splicing events in ten different grapevine cultivars | 3.3 | 21 | Citations (PDF) |
| 166 | Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies) | 2.3 | 30 | Citations (PDF) |
| 167 | Genome-Wide Mapping of Structural Variations Reveals a Copy Number Variant That Determines Reproductive Morphology in Cucumber | 7.6 | 154 | Citations (PDF) |
| 168 | Horsetails Are Ancient Polyploids: Evidence from <i>Equisetum giganteum</i> | 7.6 | 85 | Citations (PDF) |
| 169 | Genome-Wide Analysis Reveals Diverged Patterns of Codon Bias, Gene Expression, and Rates of Sequence Evolution in Picea Gene Families | 2.4 | 65 | Citations (PDF) |
| 170 | Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays | 5.1 | 92 | Citations (PDF) |
| 171 | Polyploidy and genome evolution in plants | 3.2 | 717 | Citations (PDF) |
| 172 | <i>Arabidopsis</i> Ensemble Reverse-Engineered Gene Regulatory Network Discloses Interconnected Transcription Factors in Oxidative Stress | 7.6 | 87 | Citations (PDF) |
| 173 | The KnownLeaf literature curation system captures knowledge about Arabidopsis leaf growth and development and facilitates integrated data mining | 3.8 | 8 | Citations (PDF) |
| 174 | PLAZA 3.0: an access point for plant comparative genomics | 15.5 | 347 | Citations (PDF) |
| 175 | Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts | 3.4 | 56 | Citations (PDF) |
| 176 | The Plant Genome Integrative Explorer Resource: PlantGen<scp>IE</scp>.org | 8.1 | 332 | Citations (PDF) |
| 177 | An Updated and Comprehensive rRNA Phylogeny of (Crown) Eukaryotes Based on Rate-Calibrated Evolutionary Distances | 1.7 | 26 | Citations (PDF) |
| 178 | Improving the Adaptability of Simulated Evolutionary Swarm Robots in Dynamically Changing Environments | 2.3 | 11 | Citations (PDF) |
| 179 | Systematic Structural Characterization of Metabolites in <i>Arabidopsis</i> via Candidate Substrate-Product Pair Networks
| 7.6 | 123 | Citations (PDF) |
| 180 | Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite | 5.5 | 168 | Citations (PDF) |
| 181 | Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations | 13.7 | 525 | Citations (PDF) |
| 182 | An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies | 3.3 | 102 | Citations (PDF) |
| 183 | Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution | 3.7 | 158 | Citations (PDF) |
| 184 | The Global Invertebrate Genomics Alliance (GIGA): Developing Community Resources to Study Diverse Invertebrate Genomes | 2.3 | 111 | Citations (PDF) |
| 185 | miRNA profiling in leaf and cork tissues of Quercus suber reveals novel miRNAs and tissue-specific expression patterns | 1.4 | 24 | Citations (PDF) |
| 186 | The genome of Eucalyptus grandis | 37.9 | 844 | Citations (PDF) |
| 187 | Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary | 4.6 | 446 | Citations (PDF) |
| 188 | Comparative in silicoanalysis of EST-SSRs in angiosperm and gymnosperm tree genera | 4.3 | 33 | Citations (PDF) |
| 189 | A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp. | 3.6 | 159 | Citations (PDF) |
| 190 | ASP-G: an ASP-based method for finding attractors in genetic regulatory networks | 4.7 | 14 | Citations (PDF) |
| 191 | The heterothallic sugarbeet pathogen Cercospora beticola contains exon fragments of both MAT genes that are homogenized by concerted evolution | 2.1 | 17 | Citations (PDF) |
| 192 | The (r)evolution of gene regulatory networks controlling Arabidopsis plant reproduction: a two-decade history | 5.1 | 115 | Citations (PDF) |
| 193 | The genome sequence of the orchid Phalaenopsis equestris | 25.2 | 464 | Citations (PDF) |
| 194 | Pan genome of the phytoplankton Emiliania underpins its global distribution | 37.9 | 497 | Citations (PDF) |
| 195 | Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions | 3.3 | 176 | Citations (PDF) |
| 196 | SILAC-Based Proteome Analysis of <i>Starmerella bombicola</i> Sophorolipid Production | 3.4 | 25 | Citations (PDF) |
| 197 | Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants | 7.5 | 399 | Citations (PDF) |
| 198 | <i>Candida bombicola</i> as a platform organism for the production of tailor‐made biomolecules | 3.9 | 45 | Citations (PDF) |
| 199 | The Norway spruce genome sequence and conifer genome evolution | 37.9 | 1,437 | Citations (PDF) |
| 200 | The Mycobacterium tuberculosis regulatory network and hypoxia | 37.9 | 459 | Citations (PDF) |
| 201 | The Membrane-Bound NAC Transcription Factor ANAC013 Functions in Mitochondrial Retrograde Regulation of the Oxidative Stress Response in <i>Arabidopsis</i>
| 7.6 | 359 | Citations (PDF) |
| 202 | The Potential of Text Mining in Data Integration and Network Biology for Plant Research: A Case Study on<i>Arabidopsis</i> | 7.6 | 25 | Citations (PDF) |
| 203 | Inference of Genome Duplications from Age Distributions Revisited | 4.7 | 168 | Citations (PDF) |
| 204 | The Complex Intron Landscape and Massive Intron Invasion in a Picoeukaryote Provides Insights into Intron Evolution | 2.4 | 30 | Citations (PDF) |
| 205 | Orthology <scp>G</scp>uided <scp>A</scp>ssembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in <i><scp>L</scp>olium perenne</i> | 8.8 | 23 | Citations (PDF) |
| 206 | pico‐<scp>PLAZA</scp>, a genome database of microbial photosynthetic eukaryotes | 3.7 | 93 | Citations (PDF) |
| 207 | The biosynthetic gene cluster for sophorolipids: a biotechnological interesting biosurfactant produced by <i><scp>S</scp>tarmerella bombicola</i> | 2.5 | 119 | Citations (PDF) |
| 208 | Large-Scale Event Extraction from Literature with Multi-Level Gene Normalization | 2.3 | 94 | Citations (PDF) |
| 209 | From DNA- to NA-centrism and the conditions for gene-centrism revisited | 1.1 | 3 | Citations (PDF) |
| 210 | i-ADHoRe 3.0—fast and sensitive detection of genomic homology in extremely large data sets | 15.5 | 226 | Citations (PDF) |
| 211 | Evaluation and Properties of the Budding Yeast Phosphoproteome | 3.0 | 45 | Citations (PDF) |
| 212 | Higher Intron Loss Rate in Arabidopsis thaliana Than A. lyrata Is Consistent with Stronger Selection for a Smaller Genome | 4.7 | 43 | Citations (PDF) |
| 213 | Dissecting Plant Genomes with the PLAZA Comparative Genomics Platform
| 5.5 | 250 | Citations (PDF) |
| 214 | Decoding Plant and Animal Genome Plasticity from Differential Paleo-Evolutionary Patterns and Processes | 2.4 | 92 | Citations (PDF) |
| 215 | A Comprehensive Analysis of Genes Encoding Small Secreted Proteins Identifies Candidate Effectors in <i>Melampsora larici-populina</i> (Poplar Leaf Rust) | 3.3 | 153 | Citations (PDF) |
| 216 | Gamma Paleohexaploidy in the Stem Lineage of Core Eudicots: Significance for MADS-Box Gene and Species Diversification | 4.7 | 135 | Citations (PDF) |
| 217 | Integrative Genomic Analysis Implicates Gain of<i>PIK3CA</i>at 3q26 and<i>MYC</i>at 8q24 in Chronic Lymphocytic Leukemia | 6.8 | 78 | Citations (PDF) |
| 218 | Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage | 8.1 | 163 | Citations (PDF) |
| 219 | GenomeView: a next-generation genome browser | 15.5 | 145 | Citations (PDF) |
| 220 | ORCAE: online resource for community annotation of eukaryotes | 24.6 | 202 | Citations (PDF) |
| 221 | A Transgenic Mouse Marking Live Replicating Cells Reveals In Vivo Transcriptional Program of Proliferation | 7.7 | 65 | Citations (PDF) |
| 222 | GOLVEN Secretory Peptides Regulate Auxin Carrier Turnover during Plant Gravitropic Responses | 7.7 | 222 | Citations (PDF) |
| 223 | Deconstruction of the (Paleo)Polyploid Grapevine Genome Based on the Analysis of Transposition Events Involving NBS Resistance Genes | 2.3 | 38 | Citations (PDF) |
| 224 | Transcriptional Profiling of Plasmodium falciparum Parasites from Patients with Severe Malaria Identifies Distinct Low vs. High Parasitemic Clusters | 2.3 | 21 | Citations (PDF) |
| 225 | Redundancy and rewiring of genetic networks following genome-wide duplication events | 7.2 | 130 | Citations (PDF) |
| 226 | Peakbin Selection in Mass Spectrometry Data Using a Consensus Approach with Estimation of Distribution Algorithms | 2.9 | 29 | Citations (PDF) |
| 227 | Enrichment and aggregation of topological motifs are independent organizational principles of integrated interaction networks | 3.1 | 16 | Citations (PDF) |
| 228 | Context-dependent codon partition models provide significant increases in model fit in atpB and rbcL protein-coding genes | 3.1 | 4 | Citations (PDF) |
| 229 | Obligate biotrophy features unraveled by the genomic analysis of rust fungi | 7.5 | 707 | Citations (PDF) |
| 230 | The Medicago genome provides insight into the evolution of rhizobial symbioses | 37.9 | 1,253 | Citations (PDF) |
| 231 | Comparative genomics of the pathogenic ciliate Ichthyophthirius multifiliis, its free-living relatives and a host species provide insights into adoption of a parasitic lifestyle and prospects for disease control | 8.1 | 121 | Citations (PDF) |
| 232 | The genome of Tetranychus urticae reveals herbivorous pest adaptations | 37.9 | 1,045 | Citations (PDF) |
| 233 | HIGH-PRECISION BIO-MOLECULAR EVENT EXTRACTION FROM TEXT USING PARALLEL BINARY CLASSIFIERS | 1.9 | 6 | Citations (PDF) |
| 234 | Journey through the past: 150 million years of plant genome evolution | 6.2 | 92 | Citations (PDF) |
| 235 | The Arabidopsis lyrata genome sequence and the basis of rapid genome size change | 25.2 | 896 | Citations (PDF) |
| 236 | Genomes: the truth is in there | 5.2 | 0 | Citations (PDF) |
| 237 | U-Compare bio-event meta-service: compatible BioNLP event extraction services | 3.0 | 11 | Citations (PDF) |
| 238 | The Eucalyptus grandisGenome Project: Genome and transcriptome resources for comparative analysis of woody plant biology | 2.7 | 24 | Citations (PDF) |
| 239 | Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine | 3.3 | 68 | Citations (PDF) |
| 240 | A greedy, graph-based algorithm for the alignment of multiple homologous gene lists | 4.7 | 24 | Citations (PDF) |
| 241 | Structural and functional organization of RNA regulons in the post-transcriptional regulatory network of yeast | 15.5 | 26 | Citations (PDF) |
| 242 | CyClus3D: a Cytoscape plugin for clustering network motifs in integrated networks | 4.7 | 13 | Citations (PDF) |
| 243 | Comparative Network Analysis Reveals That Tissue Specificity and Gene Function Are Important Factors Influencing the Mode of Expression Evolution in Arabidopsis and Rice
| 5.5 | 108 | Citations (PDF) |
| 244 | Using Non-Reversible Context-Dependent Evolutionary Models to Study Substitution Patterns in Primate Non-Coding Sequences | 1.7 | 21 | Citations (PDF) |
| 245 | Modelling the ancestral sequence distribution and model frequencies in context-dependent models for primate non-coding sequences | 3.1 | 19 | Citations (PDF) |
| 246 | The Potential for pathogenicity was present in the ancestor of the Ascomycete subphylum Pezizomycotina | 3.1 | 5 | Citations (PDF) |
| 247 | The hidden duplication past of the plant pathogen Phytophthora and its consequences for infection | 3.3 | 34 | Citations (PDF) |
| 248 | The Ectocarpus genome and the independent evolution of multicellularity in brown algae | 37.9 | 870 | Citations (PDF) |
| 249 | The genome of the domesticated apple (Malus × domestica Borkh.) | 25.2 | 2,054 | Citations (PDF) |
| 250 | 2R or not 2R is not the question anymore | 47.0 | 57 | Citations (PDF) |
| 251 | Module Network Inference from a Cancer Gene Expression Data Set Identifies MicroRNA Regulated Modules | 2.3 | 46 | Citations (PDF) |
| 252 | TAPIR, a web server for the prediction of plant microRNA targets, including target mimics | 4.7 | 402 | Citations (PDF) |
| 253 | Posttranslational regulation impacts the fate of duplicated genes | 7.5 | 66 | Citations (PDF) |
| 254 | Robust biomarker identification for cancer diagnosis with ensemble feature selection methods | 4.7 | 542 | Citations (PDF) |
| 255 | Discriminative and informative features for biomolecular text mining with ensemble feature selection | 4.7 | 33 | Citations (PDF) |
| 256 | Prediction of a gene regulatory network linked to prostate cancer from gene expression, microRNA and clinical data | 4.7 | 32 | Citations (PDF) |
| 257 | AGRONOMICS1: A New Resource for Arabidopsis Transcriptome Profiling
| 5.5 | 62 | Citations (PDF) |
| 258 | PLAZA: A Comparative Genomics Resource to Study Gene and Genome Evolution in Plants | 7.6 | 260 | Citations (PDF) |
| 259 | Targeted interactomics reveals a complex core cell cycle machinery in <i>Arabidopsis thaliana</i> | 6.7 | 336 | Citations (PDF) |
| 260 | Genome-wide analysis of the diatom cell cycle unveils a novel type of cyclins involved in environmental signaling | 8.1 | 107 | Citations (PDF) |
| 261 | A Snapshot of the Emerging Tomato Genome Sequence | 3.3 | 74 | Citations (PDF) |
| 262 | Unraveling Transcriptional Control in Arabidopsis Using cis-Regulatory Elements and Coexpression Networks
| 5.5 | 208 | Citations (PDF) |
| 263 | Toward a gold standard for promoter prediction evaluation | 4.7 | 67 | Citations (PDF) |
| 264 | Module networks revisited: computational assessment and prioritization of model predictions | 4.7 | 84 | Citations (PDF) |
| 265 | Efficient context-dependent model building based on clustering posterior distributions for non-coding sequences | 3.1 | 8 | Citations (PDF) |
| 266 | Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression | 3.3 | 125 | Citations (PDF) |
| 267 | Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks | 3.1 | 56 | Citations (PDF) |
| 268 | Unravelling cis-Regulatory Elements in the Genome of the Smallest Photosynthetic Eukaryote: Phylogenetic Footprinting in Ostreococcus | 1.7 | 10 | Citations (PDF) |
| 269 | Genome sequence of the recombinant protein production host Pichia pastoris | 29.8 | 466 | Citations (PDF) |
| 270 | The evolutionary significance of ancient genome duplications | 47.0 | 1,044 | Citations (PDF) |
| 271 | Reverse‐Engineering Transcriptional Modules from Gene Expression Data | 4.0 | 5 | Citations (PDF) |
| 272 | Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes
<i>Micromonas</i> | 36.2 | 645 | Citations (PDF) |
| 273 | The flowering world: a tale of duplications | 11.6 | 289 | Citations (PDF) |
| 274 | Transcription regulatory networks in Caenorhabditis elegans inferred through reverse-engineering of gene expression profiles constitute biological hypotheses for metazoan development | 3.1 | 25 | Citations (PDF) |
| 275 | Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress | 12.2 | 145 | Citations (PDF) |
| 276 | Plants with double genomes might have had a better chance to survive the Cretaceous–Tertiary extinction event | 7.5 | 604 | Citations (PDF) |
| 277 | A review of estimation of distribution algorithms in bioinformatics | 3.6 | 68 | Citations (PDF) |
| 278 | The Phaeodactylum genome reveals the evolutionary history of diatom genomes | 37.9 | 1,617 | Citations (PDF) |
| 279 | Novel Insights into Evolution of Protistan Polyketide Synthases through Phylogenomic Analysis | 1.7 | 65 | Citations (PDF) |
| 280 | Choose your partners: dimerization in eukaryotic transcription factors | 6.7 | 274 | Citations (PDF) |
| 281 | Analysis of a Gibbs sampler method for model-based clustering of gene expression data | 4.7 | 61 | Citations (PDF) |
| 282 | MANTIS: a phylogenetic framework for multi-species genome comparisons | 4.7 | 33 | Citations (PDF) |
| 283 | A Model-Based Approach to Study Nearest-Neighbor Influences Reveals Complex Substitution Patterns in Non-coding Sequences | 5.0 | 25 | Citations (PDF) |
| 284 | Hydrogen Peroxide-Induced Gene Expression across Kingdoms: A Comparative Analysis | 4.7 | 126 | Citations (PDF) |
| 285 | Whole-genome analysis reveals molecular innovations and evolutionary transitions in chromalveolate species | 7.5 | 56 | Citations (PDF) |
| 286 | Generic eukaryotic core promoter prediction using structural features of DNA | 4.6 | 190 | Citations (PDF) |
| 287 | FunSiP: a modular and extensible classifier for the prediction of functional sites in DNA | 4.7 | 0 | Citations (PDF) |
| 288 | ProSOM: core promoter prediction based on unsupervised clustering of DNA physical profiles | 4.7 | 78 | Citations (PDF) |
| 289 | i-ADHoRe 2.0: an improved tool to detect degenerated genomic homology using genomic profiles | 4.7 | 44 | Citations (PDF) |
| 290 | Evolution and taxonomic distribution of nonribosomal peptide and polyketide synthases | 2.0 | 42 | Citations (PDF) |
| 291 | The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation | 7.5 | 605 | Citations (PDF) |
| 292 | In search of the small ones: improved prediction of short exons in vertebrates, plants, fungi and protists | 4.7 | 42 | Citations (PDF) |
| 293 | The Complete Chloroplast and Mitochondrial DNA Sequence of Ostreococcus tauri: Organelle Genomes of the Smallest Eukaryote Are Examples of Compaction | 4.7 | 107 | Citations (PDF) |
| 294 | Translation initiation site prediction on a genomic scale: beauty in simplicity | 4.7 | 50 | Citations (PDF) |
| 295 | A High Quality Draft Consensus Sequence of the Genome of a Heterozygous Grapevine Variety | 2.3 | 975 | Citations (PDF) |
| 296 | In situ analysis of cross-hybridisation on microarrays and the inference of expression correlation | 3.0 | 65 | Citations (PDF) |
| 297 | Validating module network learning algorithms using simulated data | 3.0 | 34 | Citations (PDF) |
| 298 | An ancient genome duplication contributed to the abundance of metabolic genes in the moss Physcomitrella patens | 3.1 | 181 | Citations (PDF) |
| 299 | How many genes are there in plants (… and why are they there)? | 7.2 | 125 | Citations (PDF) |
| 300 | Unique Regulation of the Calvin Cycle in the Ultrasmall Green Alga Ostreococcus | 1.7 | 23 | Citations (PDF) |
| 301 | The FTO Gene, Implicated in Human Obesity, Is Found Only in Vertebrates and Marine Algae | 1.7 | 66 | Citations (PDF) |
| 302 | Title is missing! | 12.2 | 56 | Citations (PDF) |
| 303 | Title is missing! | 12.2 | 352 | Citations (PDF) |
| 304 | Title is missing! | 12.2 | 175 | Citations (PDF) |
| 305 | Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features | 7.5 | 841 | Citations (PDF) |
| 306 | Helicoidal transfer matrix model for inhomogeneous DNA melting | 2.1 | 12 | Citations (PDF) |
| 307 | The small RNA world of plants | 8.1 | 140 | Citations (PDF) |
| 308 | Promoter Analysis of MADS-Box Genes in Eudicots Through Phylogenetic Footprinting | 4.7 | 46 | Citations (PDF) |
| 309 | An Improved Statistical Method for Detecting Heterotachy in Nucleotide Sequences | 4.7 | 31 | Citations (PDF) |
| 310 | Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes | 7.5 | 297 | Citations (PDF) |
| 311 | Towards a prokaryotic genomic taxonomy | 10.6 | 152 | Citations (PDF) |
| 312 | Ancient duplication of cereal genomes | 8.1 | 43 | Citations (PDF) |
| 313 | EST data suggest that poplar is an ancient polyploid | 8.1 | 130 | Citations (PDF) |
| 314 | Re-evaluating prokaryotic species | 83.5 | 1,066 | Citations (PDF) |
| 315 | Functional divergence of proteins through frameshift mutations | 9.8 | 66 | Citations (PDF) |
| 316 | From 2R to 3R: evidence for a fish‐specific genome duplication (FSGD) | 2.1 | 1,012 | Citations (PDF) |
| 317 | Exploring the Plant Transcriptome through Phylogenetic Profiling | 5.5 | 42 | Citations (PDF) |
| 318 | Genome-Wide Analysis of Core Cell Cycle Genes in the Unicellular Green Alga Ostreococcus tauri | 4.7 | 67 | Citations (PDF) |
| 319 | Modeling gene and genome duplications in eukaryotes | 7.5 | 917 | Citations (PDF) |
| 320 | SpliceMachine: predicting splice sites from high-dimensional local context representations | 4.7 | 98 | Citations (PDF) |
| 321 | Large-scale structural analysis of the core promoter in mammalian and plant genomes | 15.5 | 109 | Citations (PDF) |
| 322 | Genome-Wide Identification of Potential Plant E2F Target Genes | 5.5 | 241 | Citations (PDF) |
| 323 | Genome duplication and the origin of angiosperms | 6.4 | 510 | Citations (PDF) |
| 324 | Title is missing! | 12.2 | 12 | Citations (PDF) |
| 325 | The 18S rRNA from Odontophrynus americanus 2n and 4n (Amphibia, Anura) reveals unusual extra sequences in the variable region V2 | 2.0 | 3 | Citations (PDF) |
| 326 | Building Genomic Profiles for Uncovering Segmental Homology in the Twilight Zone | 4.6 | 62 | Citations (PDF) |
| 327 | The European ribosomal RNA database | 15.5 | 239 | Citations (PDF) |
| 328 | Major events in the genome evolution of vertebrates: Paranome age and size differ considerably between ray-finned fishes and land vertebrates | 7.5 | 506 | Citations (PDF) |
| 329 | Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences | 4.7 | 499 | Citations (PDF) |
| 330 | Computational approaches to unveiling ancient genome duplications | 47.0 | 158 | Citations (PDF) |
| 331 | Title is missing! | 3.0 | 51 | Citations (PDF) |
| 332 | Recent developments in computational approaches for uncovering genomic homology | 2.1 | 22 | Citations (PDF) |
| 333 | Title is missing! | 12.2 | 64 | Citations (PDF) |
| 334 | Gene duplication and biased functional retention of paralogs in bacterial genomes | 8.2 | 159 | Citations (PDF) |
| 335 | Detection of 91 potential conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes | 7.5 | 438 | Citations (PDF) |
| 336 | Title is missing! | 0.0 | 72 | Citations (PDF) |
| 337 | Title is missing! | 0.0 | 54 | Citations (PDF) |
| 338 | Title is missing! | 0.0 | 11 | Citations (PDF) |
| 339 | Genomewide Structural Annotation and Evolutionary Analysis of the Type I MADS-Box Genes in Plants | 1.7 | 128 | Citations (PDF) |
| 340 | And then there were many: MADS goes genomic | 11.6 | 208 | Citations (PDF) |
| 341 | Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation | 2.4 | 77 | Citations (PDF) |
| 342 | Genome Duplication, a Trait Shared by 22,000 Species of Ray-Finned Fish | 4.6 | 817 | Citations (PDF) |
| 343 | Evidence That Rice and Other Cereals Are Ancient Aneuploids | 7.6 | 217 | Citations (PDF) |
| 344 | Computational Approaches to Identify Promoters and cis-Regulatory Elements in Plant Genomes | 5.5 | 160 | Citations (PDF) |
| 345 | Genome-Wide Characterization of the Lignification Toolbox in Arabidopsis
| 5.5 | 746 | Citations (PDF) |
| 346 | Structural diversification and neo-functionalization during floral MADS-box gene evolution by C-terminal frameshift mutations | 15.5 | 226 | Citations (PDF) |
| 347 | AFLPinSilico, simulating AFLP fingerprints | 4.7 | 43 | Citations (PDF) |
| 348 | Fast feature selection using a simple estimation of distribution algorithm: a case study on splice site prediction | 4.7 | 52 | Citations (PDF) |
| 349 | Analysis of the Evolutionary Relationships of HIV-1 and SIVcpz Sequences Using Bayesian Inference: Implications for the Origin of HIV-1 | 4.7 | 30 | Citations (PDF) |
| 350 | The Automatic Detection of Homologous Regions (ADHoRe) and Its Application to Microcolinearity Between Arabidopsis and Rice | 4.6 | 132 | Citations (PDF) |
| 351 | Wanda: a database of duplicated fish genes | 15.5 | 39 | Citations (PDF) |
| 352 | The hidden duplication past of Arabidopsis thaliana | 7.5 | 473 | Citations (PDF) |
| 353 | Feature subset selection for splice site prediction | 4.7 | 98 | Citations (PDF) |
| 354 | The European database on small subunit ribosomal RNA | 15.5 | 233 | Citations (PDF) |
| 355 | PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences | 15.5 | 6,994 | Citations (PDF) |
| 356 | Phylogenetic analyses suggest lateral gene transfer from the mitochondrion to the apicoplast | 2.3 | 23 | Citations (PDF) |
| 357 | Dealing with saturation at the amino acid level: a case study based on anciently duplicated zebrafish genes | 2.3 | 62 | Citations (PDF) |
| 358 | Evolutionary Relationships among Heterokont Algae (the Autotrophic Stramenopiles) Based on Combined Analyses of Small and Large Subunit Ribosomal RNA | 1.7 | 43 | Citations (PDF) |
| 359 | Detecting the undetectable: uncovering duplicated segments in Arabidopsis by comparison with rice | 9.8 | 52 | Citations (PDF) |
| 360 | The Ghost of Selection Past: Rates of Evolution and Functional Divergence of Anciently Duplicated Genes | 1.7 | 174 | Citations (PDF) |
| 361 | Genome duplication, divergent resolution and speciation | 9.8 | 175 | Citations (PDF) |
| 362 | The European Large Subunit Ribosomal RNA Database | 15.5 | 163 | Citations (PDF) |
| 363 | Comparative genomics provides evidence for an ancient genome duplication event in fish | 3.7 | 469 | Citations (PDF) |
| 364 | Distribution of substitution rates and location of insertion sites in the tertiary structure of ribosomal RNA | 15.5 | 139 | Citations (PDF) |
| 365 | How Molecules Evolve in Eubacteria | 4.7 | 45 | Citations (PDF) |
| 366 | Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA | 15.5 | 197 | Citations (PDF) |
| 367 | The European Large Subunit Ribosomal RNA database | 15.5 | 55 | Citations (PDF) |
| 368 | The European Small Subunit Ribosomal RNA database | 15.5 | 230 | Citations (PDF) |
| 369 | Microsporidia: accumulating molecular evidence that a group of amitochondriate and suspectedly primitive eukaryotes are just curious fungi | 2.3 | 205 | Citations (PDF) |
| 370 | Construction of a variability map for eukaryotic large subunit ribosomal RNA | 15.5 | 49 | Citations (PDF) |
| 371 | Database on the structure of small subunit ribosomal RNA | 15.5 | 84 | Citations (PDF) |
| 372 | Database on the structure of large subunit ribosomal RNA | 15.5 | 102 | Citations (PDF) |
| 373 | The taxonomic position ofChlamydomyxa labyrinthuloides | 2.2 | 13 | Citations (PDF) |
| 374 | Phylogenetic Analysis of the SSU rRNA from Members of the Chrysophyceae | 1.7 | 88 | Citations (PDF) |
| 375 | Database on the structure of small ribosomal subunit RNA | 15.5 | 79 | Citations (PDF) |
| 376 | Database on the structure of large ribosomal subunit RNA | 15.5 | 35 | Citations (PDF) |
| 377 | Metazoan Relationships on the Basis of 18S rRNA Sequences: A Few Years Later… | 0.7 | 66 | Citations (PDF) |
| 378 | Divergent members of the bacterial division Verrucomicrobiales in a temperate freshwater lake | 2.8 | 37 | Citations (PDF) |
| 379 | Construction of evolutionary distance trees with TREECON for Windows: accounting for variation in nucleotide substitution rate among sites | 4.7 | 177 | Citations (PDF) |
| 380 | Database on the structure of large ribosomal subunit RNA | 15.5 | 30 | Citations (PDF) |
| 381 | Database on the structure of small ribosomal subunit RNA | 15.5 | 148 | Citations (PDF) |
| 382 | Molecular phylogeny of the stress-70 protein family with reference to algal relationships | 2.2 | 13 | Citations (PDF) |
| 383 | Secundary structure of the large ribosomal subunit RNA of the moss Funaria hygrometrica | 4.1 | 8 | Citations (PDF) |
| 384 | Phylogenetic analysis of a fish tapeworm, Proteocephalus exiguus, based on the small subunit rRNA gene1Note: Nucleotide sequence data reported in this paper will appear in the EMBL, GenBank™ and DDBJ Nucleotide Sequence Databases under the accession number X99976.1 | 1.3 | 11 | Citations (PDF) |
| 385 | Evolutionary Relationships Among the Eukaryotic Crown Taxa Taking into Account Site-to-Site Rate Variation in 18S rRNA | 1.7 | 233 | Citations (PDF) |
| 386 | A quantitative map of nucleotide substitution rates in bacterial rRNA | 15.5 | 280 | Citations (PDF) |
| 387 | Phylogenetic analysis of the env gene of HIV-1 isolates taking into account individual nucleotide substitution ratesAids, 1996, 10, 1485-1494 | 2.5 | 15 | Citations (PDF) |
| 388 | Substitution rate calibration of small subunit ribosomal RNA identifies chlorarachniophyte endosymbionts as remnants of green algae. | 7.5 | 166 | Citations (PDF) |
| 389 | The evolution of stramenopiles and alveolates as derived by “substitution rate calibration» of small ribosomal subunit RNA | 1.7 | 153 | Citations (PDF) |
| 390 | The Determination and Comparison of the 16S rRNA Gene Sequences of Species of the Genus Pseudomonas (sensu stricto and Estimation of the Natural Intrageneric Relationships | 3.6 | 274 | Citations (PDF) |
| 391 | Compilation of Pseudomonad Sequences Present in a Database on the Structure of Ribosomal RNA | 3.6 | 6 | Citations (PDF) |
| 392 | Database on the structure of large ribosomal subunit RNA | 15.5 | 161 | Citations (PDF) |
| 393 | Database on the structure of small ribosomal subunit RNA | 15.5 | 73 | Citations (PDF) |
| 394 | 18S Ribosomal Rna Genes of Insects: Primary Structure of the Genes and Molecular Phylogeny of the Holometabola | 1.4 | 56 | Citations (PDF) |
| 395 | Evolution according to large ribosomal subunit RNA | 1.7 | 84 | Citations (PDF) |
| 396 | Evolution according to large tribosomal subunit RNA | 1.7 | 85 | Citations (PDF) |
| 397 | Database on the structure of large ribosomal subunit RNA | 15.5 | 92 | Citations (PDF) |
| 398 | Database on the structure of small ribosomal subunit RNA | 15.5 | 175 | Citations (PDF) |
| 399 | Molecular Genealogy of Some Nematode Taxa as Based on Cytochrome c and Globin Amino Acid Sequences | 2.8 | 100 | Citations (PDF) |
| 400 | TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment | 4.7 | 1,160 | Citations (PDF) |
| 401 | About the Order of Divergence of the Major Bacterial Taxa During Evolution | 3.6 | 56 | Citations (PDF) |
| 402 | Molecular phylogeny of part of the env gene of HIV-1 strains isolated in Côte dʼlvoire | 2.5 | 49 | Citations (PDF) |
| 403 | Evolution of eukaryotes as deduced from small ribosomal subunit RNA sequences | 1.8 | 34 | Citations (PDF) |
| 404 | Reconstructing evolution from eukaryotic small-ribosomal-subunit RNA sequences: Calibration of the molecular clock | 1.7 | 126 | Citations (PDF) |
| 405 | Compilation of small ribosomal subunit RNA structures | 15.5 | 501 | Citations (PDF) |
| 406 | Evolutionary Relationships Among Higher Fungi Inferred from Small Ribosomal Subunit RNA Sequence Analysis | 3.6 | 88 | Citations (PDF) |
| 407 | Structure of 16S and 23S Ribosomal RNA Genes in Campylobacter Species: Phylogenetic Analysis of the Genus Campylobacter and Presence of Internal Transcribed Spacers | 3.6 | 39 | Citations (PDF) |
| 408 | TREECON: A software package for the construction and drawing of evolutionary trees | 4.7 | 177 | Citations (PDF) |
| 409 | The gene coding for small ribosomal subunit RNA in the basidiomyceteUstilago maydiscontains a group I intron | 15.5 | 85 | Citations (PDF) |
| 410 | Evolution of Basidiomycetous Yeasts as Deduced from Small Ribosomal Subunit RNA Sequences | 3.6 | 60 | Citations (PDF) |
| 411 | Phylogenetic Relationships among Ascomycetes and Ascomycete-like Yeasts as Deduced from Small Ribosomal Subunit RNA Sequences | 3.6 | 72 | Citations (PDF) |
| 412 | Structure of the small ribosomal subunit RNA of the pulmonate snail,Limicolaria kambeul, and phylogenetic analysis of the Metazoa | 2.7 | 33 | Citations (PDF) |
| 413 | Compilation of small ribosomal subunit RNA sequences | 15.5 | 518 | Citations (PDF) |
| 414 | TAXONOMIC STUDY OF MARINE OSCILLATORIACEAN STRAINS (CYANOBACTERIA) WITH NARROW TRICHOMES. II. NUCLEOTIDE SEQUENCE ANALYSIS OF THE 16S RIBOSOMAL RNA1 | 2.9 | 68 | Citations (PDF) |
| 415 | Compilation of small ribosomal subunit RNA sequences | 15.5 | 237 | Citations (PDF) |
| 416 | Phylogenetic analysis of five medically important Candida species as deduced on the basis of small ribosomal subunit RNA sequences | 1.5 | 51 | Citations (PDF) |
| 417 | Small ribosomal subunit RNA sequences, evolutionary relationships among different life forms, and mitochondrial origins | 1.7 | 70 | Citations (PDF) |
| 418 | Evolution of green plants and their relationship with other photosynthetic eukaryotes as deduced from 5S ribosomal RNA sequences | 1.1 | 35 | Citations (PDF) |
| 419 | 5S rRNA Sequences of Myxobacteria and Radioresistant Bacteria and Implications for Eubacterial Evolution | 1.8 | 13 | Citations (PDF) |
| 420 | Compilation of small ribosomal subunit RNA sequences | 15.5 | 427 | Citations (PDF) |
| 421 | 5S rRNA sequences of representatives of the genera Chlorobium, Prosthecochloris, Thermomicrobium, Cytophaga, Flavobacterium, Flexibacter and Saprospira and a discussion of the evolution of eubacteria in general | 1.5 | 25 | Citations (PDF) |
| 422 | The 18S ribosomal RNA sequence of the sea anemone Ammonia sulcata
and its evolutionary position among other eukaryotes | 2.7 | 33 | Citations (PDF) |
| 423 | 5S Ribosomal Ribonucleic Acid Sequences in Bacteroides and Fusobacterium: Evolutionary Relationships within These Genera and among Eubacteria in General | 1.8 | 14 | Citations (PDF) |
| 424 | The Nucleotide Sequence of the Small Ribosomal Subunit RNA of the Yeast Candida albicans and the Evolutionary Position of the Fungi among the Eukaryotes | 3.6 | 92 | Citations (PDF) |
| 425 | The 5S ribosomal RNA sequences of a red algal rhodoplast and a gymnosperm chloroplast. Implications for the evolution of plastids and cyanobacteria | 1.7 | 41 | Citations (PDF) |
| 426 | Compilation of small ribosomal subunit RNA sequences | 15.5 | 245 | Citations (PDF) |
| 427 | The evolution of gene duplicates in angiosperms and the impact of protein-protein interactions and the mechanism of duplication | 2.4 | 62 | Citations (PDF) |
| 428 | Genome streamlining in a minute herbivore that manipulates its host plant | 1.6 | 54 | Citations (PDF) |
| 429 | Emergent adaptive behaviour of GRN-controlled simulated robots in a changing environment | 0.0 | 4 | Citations (PDF) |
| 430 | Title is missing! 0 | | 1 | Citations (PDF) |
| 431 | Resolving the Stasis-Dynamism Paradox: Genome Evolution in Tree Ferns | 4.7 | 1 | Citations (PDF) |
| 432 | Gene expression divergence following gene and genome duplications in spatially resolved plant transcriptomes | 7.6 | 3 | Citations (PDF) |
| 433 | Revisiting ancient whole-genome duplications in the seed and flowering plants through the lens of dosage-sensitive genes | 10.9 | 0 | Citations (PDF) |
| 434 | Gapless pangenome analyses reveal fast
<i>Brassica rapa</i>
subspeciation | 36.2 | 1 | Citations (PDF) |
