| 1 | Translocations can drive expression changes of multiple genes in regulons covering entire chromosome arms | 15.5 | 0 | Citations (PDF) |
| 2 | Assessing the impact of interregional mobility on COVID19 spread in Spain using transfer entropy | 3.4 | 0 | Citations (PDF) |
| 3 | Patient stratification reveals the molecular basis of disease co-occurrences | 7.5 | 4 | Citations (PDF) |
| 4 | UNCAN.eu: Toward a European Federated Cancer Research Data Hub | 25.1 | 4 | Citations (PDF) |
| 5 | DIRECTEUR: transcriptome-based prediction of small molecules that replace transcription factors for direct cell conversion | 4.7 | 0 | Citations (PDF) |
| 6 | Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches | 4.9 | 14 | Citations (PDF) |
| 7 | Rare disease research workflow using multilayer networks elucidates the molecular determinants of severity in Congenital Myasthenic Syndromes | 13.7 | 14 | Citations (PDF) |
| 8 | Immunization with V987H-stabilized Spike glycoprotein protects K18-hACE2 mice and golden Syrian hamsters upon SARS-CoV-2 infection | 13.7 | 1 | Citations (PDF) |
| 9 | Frustraevo: a web server to localize and quantify the conservation of local energetic frustration in protein families | 15.5 | 6 | Citations (PDF) |
| 10 | p53 rapidly restructures 3D chromatin organization to trigger a transcriptional response | 13.7 | 25 | Citations (PDF) |
| 11 | 3Dmapper: a command line tool for BioBank-scale mapping of variants to protein structures | 4.7 | 0 | Citations (PDF) |
| 12 | Lung Tissue Multilayer Network Analysis Uncovers the Molecular Heterogeneity of Chronic Obstructive Pulmonary Disease | 8.9 | 14 | Citations (PDF) |
| 13 | Prevalence and differences in the co-administration of drugs known to interact: an analysis of three distinct and large populations | 7.1 | 13 | Citations (PDF) |
| 14 | Gene set proximity analysis: expanding gene set enrichment analysis through learned geometric embeddings, with drug-repurposing applications in COVID-19 | 4.7 | 10 | Citations (PDF) |
| 15 | CanMethdb: a database for genome-wide DNA methylation annotation in cancers | 4.7 | 5 | Citations (PDF) |
| 16 | Efficient querying of genomic reference databases with
gget | 4.7 | 31 | Citations (PDF) |
| 17 | CATHe: detection of remote homologues for CATH superfamilies using embeddings from protein language models | 4.7 | 36 | Citations (PDF) |
| 18 | Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution | 13.7 | 17 | Citations (PDF) |
| 19 | PANACEA: network-based methods for pharmacotherapy prioritization in personalized oncology | 4.7 | 3 | Citations (PDF) |
| 20 | Predicting protein stability changes upon mutation using a simple orientational potential | 4.7 | 24 | Citations (PDF) |
| 21 | LEGO-CSM: a tool for functional characterization of proteins | 4.7 | 2 | Citations (PDF) |
| 22 | Molecular bases of comorbidities: present and future perspectives | 9.8 | 15 | Citations (PDF) |
| 23 | PC_ali: a tool for improved multiple alignments and evolutionary inference based on a hybrid protein sequence and structure similarity score | 4.7 | 5 | Citations (PDF) |
| 24 | PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks | 2.9 | 33 | Citations (PDF) |
| 25 | Overview of DrugProt task at BioCreative VII: data and methods for large-scale text mining and knowledge graph generation of heterogenous chemical–protein relations | 2.7 | 22 | Citations (PDF) |
| 26 | The PENGUIN approach to reconstruct protein interactions at enhancer-promoter regions and its application to prostate cancer | 13.7 | 1 | Citations (PDF) |
| 27 | Local energetic frustration conservation in protein families and superfamilies | 13.7 | 39 | Citations (PDF) |
| 28 | Limits and potential of combined folding and docking | 4.7 | 20 | Citations (PDF) |
| 29 | The structural coverage of the human proteome before and after AlphaFold | 3.1 | 121 | Citations (PDF) |
| 30 | Plotgardener: cultivating precise multi-panel figures in R | 4.7 | 116 | Citations (PDF) |
| 31 | ExTRI: Extraction of transcription regulation interactions from literature | 2.4 | 14 | Citations (PDF) |
| 32 | Parallel model exploration for tumor treatment simulations | 1.9 | 12 | Citations (PDF) |
| 33 | Optimizing Dosage-Specific Treatments in a Multi-Scale Model of a Tumor Growth | 3.5 | 10 | Citations (PDF) |
| 34 | Mortality in Persons With Autism Spectrum Disorder or Attention-Deficit/Hyperactivity Disorder | 8.6 | 114 | Citations (PDF) |
| 35 | Detection of oncogenic and clinically actionable mutations in cancer genomes critically depends on variant calling tools | 4.7 | 22 | Citations (PDF) |
| 36 | Design and methodological characteristics of studies using observational routinely collected health data for investigating the link between cancer and neurodegenerative diseases: protocol for a meta-research study | 1.9 | 1 | Citations (PDF) |
| 37 | Evaluating the policy of closing bars and restaurants in Cataluña and its effects on mobility and COVID19 incidence | 3.4 | 10 | Citations (PDF) |
| 38 | TVAR: assessing tissue-specific functional effects of non-coding variants with deep learning | 4.7 | 5 | Citations (PDF) |
| 39 | A structural biology community assessment of AlphaFold2 applications | 8.8 | 562 | Citations (PDF) |
| 40 | 3D chromatin connectivity underlies replication origin efficiency in mouse embryonic stem cells | 15.5 | 15 | Citations (PDF) |
| 41 | IntAPT: integrated assembly of phenotype-specific transcripts from multiple RNA-seq profiles | 4.7 | 1 | Citations (PDF) |
| 42 | Classification in biological networks with hypergraphlet kernels | 4.7 | 24 | Citations (PDF) |
| 43 | STAG2 loss-of-function affects short-range genomic contacts and modulates the basal-luminal transcriptional program of bladder cancer cells | 15.5 | 29 | Citations (PDF) |
| 44 | Simulating SARS-CoV-2 epidemics by region-specific variables and modeling contact tracing app containment | 10.4 | 31 | Citations (PDF) |
| 45 | Unraveling the molecular basis of host cell receptor usage in SARS-CoV-2 and other human pathogenic β-CoVs | 3.9 | 5 | Citations (PDF) |
| 46 | Artificial intelligence in cancer research: learning at different levels of data granularity | 4.1 | 32 | Citations (PDF) |
| 47 | The eTRANSAFE Project on Translational Safety Assessment through Integrative Knowledge Management: Achievements and Perspectives | 4.2 | 29 | Citations (PDF) |
| 48 | Protein contact map refinement for improving structure prediction using generative adversarial networks | 4.7 | 12 | Citations (PDF) |
| 49 | The multilayer community structure of medulloblastoma | 3.6 | 9 | Citations (PDF) |
| 50 | Visual exploration of large metabolic models | 4.7 | 9 | Citations (PDF) |
| 51 | Mutational mechanisms shaping the coding and noncoding genome of germinal center derived B-cell lymphomas | 7.7 | 52 | Citations (PDF) |
| 52 | Transcriptomic and Genetic Associations between Alzheimer’s Disease, Parkinson’s Disease, and Cancer | 3.8 | 34 | Citations (PDF) |
| 53 | Computational analysis of sense-antisense chimeric transcripts reveals their potential regulatory features and the landscape of expression in human cells | 2.2 | 19 | Citations (PDF) |
| 54 | Co-evolutionary distance predictions contain flexibility information | 4.7 | 18 | Citations (PDF) |
| 55 | Systems biology at the giga-scale: Large multiscale models of complex, heterogeneous multicellular systems | 1.4 | 40 | Citations (PDF) |
| 56 | MAX mutant small-cell lung cancers exhibit impaired activities of MGA-dependent noncanonical polycomb repressive complex | 7.5 | 12 | Citations (PDF) |
| 57 | Assessing the accuracy of contact and distance predictions in
CASP14 | 2.6 | 20 | Citations (PDF) |
| 58 | A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration | 5.7 | 29 | Citations (PDF) |
| 59 | COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms | 6.7 | 77 | Citations (PDF) |
| 60 | VINYL: Variant prIoritizatioN bY survivaL analysis | 4.7 | 5 | Citations (PDF) |
| 61 | COVID-19 Flow-Maps an open geographic information system on COVID-19 and human mobility for Spain | 5.7 | 25 | Citations (PDF) |
| 62 | iScore: a novel graph kernel-based function for scoring protein–protein docking models | 4.7 | 75 | Citations (PDF) |
| 63 | PDBe-KB: a community-driven resource for structural and functional annotations | 15.5 | 127 | Citations (PDF) |
| 64 | On the inconsistent treatment of gene-protein-reaction rules in context-specific metabolic models | 4.7 | 7 | Citations (PDF) |
| 65 | cd2sbgnml: bidirectional conversion between CellDesigner and SBGN formats | 4.7 | 10 | Citations (PDF) |
| 66 | Towards FAIR principles for research software | 1.2 | 233 | Citations (PDF) |
| 67 | Expanded encyclopaedias of DNA elements in the human and mouse genomes | 37.9 | 2,189 | Citations (PDF) |
| 68 | Formal axioms in biomedical ontologies improve analysis and interpretation of associated data | 4.7 | 16 | Citations (PDF) |
| 69 | Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples | 13.7 | 44 | Citations (PDF) |
| 70 | Sex differences in oncogenic mutational processes | 13.7 | 86 | Citations (PDF) |
| 71 | Interpreting molecular similarity between patients as a determinant of disease comorbidity relationships | 13.7 | 31 | Citations (PDF) |
| 72 | Sex and gender differences and biases in artificial intelligence for biomedicine and healthcare | 10.4 | 420 | Citations (PDF) |
| 73 | A user guide for the online exploration and visualization of PCAWG data | 13.7 | 33 | Citations (PDF) |
| 74 | The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences | 4.7 | 66 | Citations (PDF) |
| 75 | Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig | 13.7 | 45 | Citations (PDF) |
| 76 | iPAC: a genome-guided assembler of isoforms via phasing and combing paths | 4.7 | 5 | Citations (PDF) |
| 77 | Heterogeneous networks integration for disease–gene prioritization with node kernels | 4.7 | 23 | Citations (PDF) |
| 78 | Genomic footprints of activated telomere maintenance mechanisms in cancer | 13.7 | 118 | Citations (PDF) |
| 79 | A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns | 13.7 | 195 | Citations (PDF) |
| 80 | High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations | 13.7 | 68 | Citations (PDF) |
| 81 | Combined burden and functional impact tests for cancer driver discovery using DriverPower | 13.7 | 55 | Citations (PDF) |
| 82 | Integrative pathway enrichment analysis of multivariate omics data | 13.7 | 209 | Citations (PDF) |
| 83 | Divergent mutational processes distinguish hypoxic and normoxic tumours | 13.7 | 129 | Citations (PDF) |
| 84 | Inferring structural variant cancer cell fraction | 13.7 | 45 | Citations (PDF) |
| 85 | Pathway and network analysis of more than 2500 whole cancer genomes | 13.7 | 99 | Citations (PDF) |
| 86 | The evolutionary history of 2,658 cancers | 37.9 | 978 | Citations (PDF) |
| 87 | Patterns of somatic structural variation in human cancer genomes | 37.9 | 797 | Citations (PDF) |
| 88 | The repertoire of mutational signatures in human cancer | 37.9 | 3,137 | Citations (PDF) |
| 89 | Analyses of non-coding somatic drivers in 2,658 cancer whole genomes | 37.9 | 570 | Citations (PDF) |
| 90 | Pan-cancer analysis of whole genomes | 37.9 | 2,826 | Citations (PDF) |
| 91 | Genomic basis for RNA alterations in cancer | 37.9 | 385 | Citations (PDF) |
| 92 | The landscape of viral associations in human cancers | 25.2 | 349 | Citations (PDF) |
| 93 | Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition | 25.2 | 422 | Citations (PDF) |
| 94 | Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer | 25.2 | 262 | Citations (PDF) |
| 95 | Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing | 25.2 | 640 | Citations (PDF) |
| 96 | Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis | 4.4 | 172 | Citations (PDF) |
| 97 | Understanding oncogenicity of cancer driver genes and mutations in the cancer genomics era | 2.7 | 46 | Citations (PDF) |
| 98 | Unveiling new disease, pathway, and gene associations via multi-scale neural network | 2.3 | 21 | Citations (PDF) |
| 99 | PathExt: a general framework for path-based mining of omics-integrated biological networks | 4.7 | 18 | Citations (PDF) |
| 100 | Butler enables rapid cloud-based analysis of thousands of human genomes | 29.8 | 13 | Citations (PDF) |
| 101 | Comprehensive molecular characterization of mitochondrial genomes in human cancers | 25.2 | 398 | Citations (PDF) |
| 102 | CoMeBack: DNA methylation array data analysis for co-methylated regions | 4.7 | 60 | Citations (PDF) |
| 103 | The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research | 0.5 | 6 | Citations (PDF) |
| 104 | COVID-19 and beyond: a call for action and audacious solidarity to all the citizens and nations, it is humanity’s fight | 0.5 | 3 | Citations (PDF) |
| 105 | ECCB2020: the 19th European Conference on Computational Biology | 4.7 | 1 | Citations (PDF) |
| 106 | BIPSPI: a method for the prediction of partner-specific protein–protein interfaces | 4.7 | 94 | Citations (PDF) |
| 107 | Random walk with restart on multiplex and heterogeneous biological networks | 4.7 | 287 | Citations (PDF) |
| 108 | The bio.tools registry of software tools and data resources for the life sciences | 8.1 | 62 | Citations (PDF) |
| 109 | Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm | 5.4 | 4 | Citations (PDF) |
| 110 | Leveraging European infrastructures to access 1 million human genomes by 2022 | 47.0 | 83 | Citations (PDF) |
| 111 | Intronic CNVs and gene expression variation in human populations | 3.2 | 85 | Citations (PDF) |
| 112 | Large-scale analysis of human gene expression variability associates highly variable drug targets with lower drug effectiveness and safety | 4.7 | 32 | Citations (PDF) |
| 113 | Molecular Inverse Comorbidity between Alzheimer’s Disease and Lung Cancer: New Insights from Matrix Factorization | 4.4 | 15 | Citations (PDF) |
| 114 | Association of Anorexia Nervosa With Risk of Cancer | 6.6 | 19 | Citations (PDF) |
| 115 | vulcanSpot: a tool to prioritize therapeutic vulnerabilities in cancer | 4.7 | 10 | Citations (PDF) |
| 116 | Interactive Extreme-Scale Analytics: Towards Battling Cancer | 0.3 | 5 | Citations (PDF) |
| 117 | AlphaFold at CASP13 | 4.7 | 300 | Citations (PDF) |
| 118 | ResPRE: high-accuracy protein contact prediction by coupling precision matrix with deep residual neural networks | 4.7 | 164 | Citations (PDF) |
| 119 | Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer | 4.4 | 43 | Citations (PDF) |
| 120 | Big data analytics for personalized medicine | 6.8 | 226 | Citations (PDF) |
| 121 | Protein multiple alignments: sequence-based versus structure-based programs | 4.7 | 41 | Citations (PDF) |
| 122 | PhenoPro: a novel toolkit for assisting in the diagnosis of Mendelian disease | 4.7 | 31 | Citations (PDF) |
| 123 | Gene expression models based on transcription factor binding events confer insight into functional <i>cis</i>-regulatory variants | 4.7 | 19 | Citations (PDF) |
| 124 | Protein–protein interaction sites prediction by ensemble random forests with synthetic minority oversampling technique | 4.7 | 157 | Citations (PDF) |
| 125 | Characterization and identification of long non-coding RNAs based on feature relationship | 4.7 | 114 | Citations (PDF) |
| 126 | The EVcouplings Python framework for coevolutionary sequence analysis | 4.7 | 286 | Citations (PDF) |
| 127 | A natural upper bound to the accuracy of predicting protein stability changes upon mutations | 4.7 | 41 | Citations (PDF) |
| 128 | ConDo: protein domain boundary prediction using coevolutionary information | 4.7 | 22 | Citations (PDF) |
| 129 | <i>De novo</i>pattern discovery enables robust assessment of functional consequences of non-coding variants | 4.7 | 21 | Citations (PDF) |
| 130 | Precision medicine needs pioneering clinical bioinformaticians | 6.6 | 51 | Citations (PDF) |
| 131 | Enhancing protein fold determination by exploring the complementary information of chemical cross-linking and coevolutionary signals | 4.7 | 18 | Citations (PDF) |
| 132 | Co-complex protein membership evaluation using Maximum Entropy on GO ontology and InterPro annotation | 4.7 | 21 | Citations (PDF) |
| 133 | DeepSF: deep convolutional neural network for mapping protein sequences to folds | 4.7 | 167 | Citations (PDF) |
| 134 | Epigenetic and Transcriptional Variability Shape Phenotypic Plasticity | 2.1 | 93 | Citations (PDF) |
| 135 | Phenotypic stability and plasticity in GMP-derived cells as determined by their underlying regulatory network | 4.7 | 14 | Citations (PDF) |
| 136 | MemBrain-contact 2.0: a new two-stage machine learning model for the prediction enhancement of transmembrane protein residue contacts in the full chain | 4.7 | 17 | Citations (PDF) |
| 137 | DNCON2: improved protein contact prediction using two-level deep convolutional neural networks | 4.7 | 160 | Citations (PDF) |
| 138 | High precision in protein contact prediction using fully convolutional neural networks and minimal sequence features | 4.7 | 179 | Citations (PDF) |
| 139 | On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures | 4.7 | 12 | Citations (PDF) |
| 140 | Protein–protein interaction specificity is captured by contact preferences and interface composition | 4.7 | 35 | Citations (PDF) |
| 141 | APPRIS 2017: principal isoforms for multiple gene sets | 15.5 | 155 | Citations (PDF) |
| 142 | Association Between Germline Mutations in BRF1, a Subunit of the RNA Polymerase III Transcription Complex, and Hereditary Colorectal Cancer | 0.9 | 33 | Citations (PDF) |
| 143 | Dynamics of Transcription Regulation in Human Bone Marrow Myeloid Differentiation to Mature Blood Neutrophils | 6.3 | 134 | Citations (PDF) |
| 144 | Bio-knowledge-based filters improve residue–residue contact prediction accuracy | 4.7 | 1 | Citations (PDF) |
| 145 | LncRNAnet: long non-coding RNA identification using deep learning | 4.7 | 98 | Citations (PDF) |
| 146 | Sequential search leads to faster, more efficient fragment-basedde novoprotein structure prediction | 4.7 | 12 | Citations (PDF) |
| 147 | ProteomeVis: a web app for exploration of protein properties from structure to sequence evolution across organisms’ proteomes | 4.7 | 7 | Citations (PDF) |
| 148 | CommWalker: correctly evaluating modules in molecular networks in light of annotation bias | 4.7 | 10 | Citations (PDF) |
| 149 | Germline variation in the oxidative DNA repair genesNUDT1andOGG1is not associated with hereditary colorectal cancer or polyposis | 4.5 | 12 | Citations (PDF) |
| 150 | Prioritizing predictive biomarkers for gene essentiality in cancer cells with mRNA expression data and DNA copy number profile | 4.7 | 4 | Citations (PDF) |
| 151 | Deep convolutional networks for quality assessment of protein folds | 4.7 | 96 | Citations (PDF) |
| 152 | Increasing the accuracy of protein loop structure prediction with evolutionary constraints | 4.7 | 9 | Citations (PDF) |
| 153 | A pipeline for local assembly of minisatellite alleles from single-molecule sequencing data | 4.7 | 2 | Citations (PDF) |
| 154 | ISCB’s initial reaction to <i>New England Journal of Medicine</i> editorial on data sharing | 4.7 | 1 | Citations (PDF) |
| 155 | Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types | 8.1 | 113 | Citations (PDF) |
| 156 | EigenTHREADER: analogous protein fold recognition by efficient contact map threading | 4.7 | 65 | Citations (PDF) |
| 157 | Capturing non-local interactions by long short-term memory bidirectional recurrent neural networks for improving prediction of protein secondary structure, backbone angles, contact numbers and solvent accessibility | 4.7 | 349 | Citations (PDF) |
| 158 | Reliability of algorithmic somatic copy number alteration detection from targeted capture data | 4.7 | 15 | Citations (PDF) |
| 159 | Most Alternative Isoforms Are Not Functionally Important | 6.7 | 85 | Citations (PDF) |
| 160 | A deep learning framework for improving long-range residue–residue contact prediction using a hierarchical strategy | 4.7 | 41 | Citations (PDF) |
| 161 | Annotating function to differentially expressed LincRNAs in myelodysplastic syndrome using a network-based method | 4.7 | 14 | Citations (PDF) |
| 162 | Information Retrieval and Text Mining Technologies for Chemistry | 52.6 | 258 | Citations (PDF) |
| 163 | HIPred: an integrative approach to predicting haploinsufficient genes | 4.7 | 42 | Citations (PDF) |
| 164 | Predicting accurate contacts in thousands of Pfam domain families using PconsC3 | 4.7 | 42 | Citations (PDF) |
| 165 | LimTox: a web tool for applied text mining of adverse event and toxicity associations of compounds, drugs and genes | 15.5 | 49 | Citations (PDF) |
| 166 | ChiPPI: a novel method for mapping chimeric protein–protein interactions uncovers selection principles of protein fusion events in cancer | 15.5 | 35 | Citations (PDF) |
| 167 | Elucidating the molecular basis of MSH2‐deficient tumors by combined germline and somatic analysis | 4.3 | 28 | Citations (PDF) |
| 168 | Comparison of algorithms for the detection of cancer drivers at subgene resolution | 24.6 | 77 | Citations (PDF) |
| 169 | Correlated mutations select misfolded from properly folded proteins | 4.7 | 3 | Citations (PDF) |
| 170 | Epigenomic annotation-based interpretation of genomic data: from enrichment analysis to machine learning | 4.7 | 36 | Citations (PDF) |
| 171 | A molecular hypothesis to explain direct and inverse co-morbidities between Alzheimer’s Disease, Glioblastoma and Lung cancer | 3.4 | 101 | Citations (PDF) |
| 172 | Forecasting residue–residue contact prediction accuracy | 4.7 | 4 | Citations (PDF) |
| 173 | Automatic identification of informative regions with epigenomic changes associated to hematopoiesis | 15.5 | 22 | Citations (PDF) |
| 174 | Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx | 8.1 | 173 | Citations (PDF) |
| 175 | Conservation of coevolving protein interfaces bridges prokaryote–eukaryote homologies in the twilight zone | 7.5 | 40 | Citations (PDF) |
| 176 | An expanded evaluation of protein function prediction methods shows an improvement in accuracy | 8.1 | 367 | Citations (PDF) |
| 177 | Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity | 8.1 | 59 | Citations (PDF) |
| 178 | The BLUEPRINT Data Analysis Portal | 5.8 | 150 | Citations (PDF) |
| 179 | The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex DiseaseCell, 2016, 167, 1415-1429.e19 | 33.7 | 1,260 | Citations (PDF) |
| 180 | CD8+ T Cells from Human Neonates Are Biased toward an Innate Immune Response | 6.3 | 77 | Citations (PDF) |
| 181 | Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune CellsCell, 2016, 167, 1398-1414.e24 | 33.7 | 693 | Citations (PDF) |
| 182 | KinMutRF: a random forest classifier of sequence variants in the human protein kinase superfamily | 3.3 | 11 | Citations (PDF) |
| 183 | The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge | 2.7 | 11 | Citations (PDF) |
| 184 | Chromatin Regulators as a Guide for Cancer Treatment Choice | 1.9 | 19 | Citations (PDF) |
| 185 | wKinMut-2: Identification and Interpretation of Pathogenic Variants in Human Protein Kinases | 4.5 | 10 | Citations (PDF) |
| 186 | Epigenomic Co-localization and Co-evolution Reveal a Key Role for 5hmC as a Communication Hub in the Chromatin Network of ESCs | 6.3 | 43 | Citations (PDF) |
| 187 | POLE and POLD1 mutations in 529 kindred with familial colorectal cancer and/or polyposis: review of reported cases and recommendations for genetic testing and surveillance | 4.2 | 234 | Citations (PDF) |
| 188 | ISCB’s initial reaction to New England Journal of Medicine editorial on data sharing | 0.5 | 1 | Citations (PDF) |
| 189 | Identifying ELIXIR Core Data Resources | 0.5 | 55 | Citations (PDF) |
| 190 | ISCB’s Initial Reaction to The New England Journal of Medicine Editorial on Data Sharing | 3.1 | 12 | Citations (PDF) |
| 191 | CHEMDNER: The drugs and chemical names extraction challenge | 5.4 | 213 | Citations (PDF) |
| 192 | The CHEMDNER corpus of chemicals and drugs and its annotation principles | 5.4 | 213 | Citations (PDF) |
| 193 | Alternatively Spliced Homologous Exons Have Ancient Origins and Are Highly Expressed at the Protein Level | 3.1 | 86 | Citations (PDF) |
| 194 | NOTCH pathway inactivation promotes bladder cancer progression | 10.6 | 106 | Citations (PDF) |
| 195 | Whole-genome fingerprint of the DNA methylome during human B cell differentiation | 25.2 | 321 | Citations (PDF) |
| 196 | ChiTaRS 2.1—an improved database of the chimeric transcripts and RNA-seq data with novel sense–antisense chimeric RNA transcripts | 15.5 | 29 | Citations (PDF) |
| 197 | Alternative splicing and co-option of transposable elements: the case of TMPO/LAP2α and ZNF451 in mammals | 4.7 | 38 | Citations (PDF) |
| 198 | Structure-PPi: a module for the annotation of cancer-related single-nucleotide variants at protein–protein interfaces | 4.7 | 40 | Citations (PDF) |
| 199 | APPRIS WebServer and WebServices | 15.5 | 20 | Citations (PDF) |
| 200 | FUN-L: gene prioritization for RNAi screens | 4.7 | 10 | Citations (PDF) |
| 201 | Summary of the BioLINK SIG 2013 meeting at ISMB/ECCB 2013 | 4.7 | 1 | Citations (PDF) |
| 202 | Non-coding recurrent mutations in chronic lymphocytic leukaemia | 37.9 | 848 | Citations (PDF) |
| 203 | Germline Mutations in FAN1 Cause Hereditary Colorectal Cancer by Impairing DNA Repair | 0.9 | 102 | Citations (PDF) |
| 204 | Detection of significant protein coevolution | 4.7 | 36 | Citations (PDF) |
| 205 | Higher gene expression variability in the more aggressive subtype of chronic lymphocytic leukemia | 9.6 | 63 | Citations (PDF) |
| 206 | Most Highly Expressed Protein-Coding Genes Have a Single Dominant Isoform | 3.4 | 117 | Citations (PDF) |
| 207 | From residue coevolution to protein conformational ensembles and functional dynamics | 7.5 | 133 | Citations (PDF) |
| 208 | The Evolutionary Fate of Alternatively Spliced Homologous Exons after Gene Duplication | 2.4 | 33 | Citations (PDF) |
| 209 | The UBC-40 Urothelial Bladder Cancer cell line index: a genomic resource for functional studies | 3.3 | 105 | Citations (PDF) |
| 210 | A computational approach inspired by simulated annealing to study the stability of protein interaction networks in cancer and neurological disorders | 2.7 | 7 | Citations (PDF) |
| 211 | Conserved Clusters of Functionally Related Genes in Two Bacterial Genomes | 1.7 | 55 | Citations (PDF) |
| 212 | Integration of biological data by kernels on graph nodes allows prediction of new genes involved in mitotic chromosome condensation | 2.5 | 45 | Citations (PDF) |
| 213 | CheNER: chemical named entity recognizer | 4.7 | 18 | Citations (PDF) |
| 214 | Molecular Evidence for the Inverse Comorbidity between Central Nervous System Disorders and Cancers Detected by Transcriptomic Meta-analyses | 3.2 | 187 | Citations (PDF) |
| 215 | Predicting Protein Relationships to Human Pathways through a Relational Learning Approach Based on Simple Sequence Features | 2.9 | 3 | Citations (PDF) |
| 216 | FireDB: a compendium of biological and pharmacologically relevant ligands | 15.5 | 24 | Citations (PDF) |
| 217 | A common structural scaffold in CTD phosphatases that supports distinct catalytic mechanisms | 2.6 | 4 | Citations (PDF) |
| 218 | Transcriptome characterization by RNA sequencing identifies a major molecular and clinical subdivision in chronic lymphocytic leukemia | 4.6 | 195 | Citations (PDF) |
| 219 | Colorectal cancer classification based on gene expression is not associated with FOLFIRI response | 33.0 | 8 | Citations (PDF) |
| 220 | Analyzing the First Drafts of the Human Proteome | 3.4 | 104 | Citations (PDF) |
| 221 | Transcriptional dissection of pancreatic tumors engrafted in mice | 9.6 | 43 | Citations (PDF) |
| 222 | Integrated Next-Generation Sequencing and Avatar Mouse Models for Personalized Cancer Treatment | 6.8 | 144 | Citations (PDF) |
| 223 | Multiple evidence strands suggest that there may be as few as 19 000 human protein-coding genes | 2.9 | 511 | Citations (PDF) |
| 224 | BioCreative-IV virtual issue | 2.7 | 46 | Citations (PDF) |
| 225 | Characterization of the DNA Methylome during Human B-Cell DifferentiationBlood, 2014, 124, 4346-4346 | 4.2 | 0 | Citations (PDF) |
| 226 | Subfunctionalization via Adaptive Evolution Influenced by Genomic Context: The Case of Histone Chaperones ASF1a and ASF1b | 4.7 | 68 | Citations (PDF) |
| 227 | Recurrent inactivation of STAG2 in bladder cancer is not associated with aneuploidy | 25.2 | 244 | Citations (PDF) |
| 228 | Towards a detailed atlas of protein–protein interactions | 6.4 | 93 | Citations (PDF) |
| 229 | The Functional Genomics Network in the evolution of biological text mining over the past decade | 4.7 | 10 | Citations (PDF) |
| 230 | Emerging methods in protein co-evolution | 47.0 | 612 | Citations (PDF) |
| 231 | Incorporating information on predicted solvent accessibility to the co-evolution-based study of protein interactions | 3.1 | 8 | Citations (PDF) |
| 232 | Late-replicating CNVs as a source of new genes | 1.2 | 14 | Citations (PDF) |
| 233 | APPRIS: annotation of principal and alternative splice isoforms | 15.5 | 243 | Citations (PDF) |
| 234 | RUbioSeq: a suite of parallelized pipelines to automate exome variation and bisulfite-seq analyses | 4.7 | 38 | Citations (PDF) |
| 235 | BioC: a minimalist approach to interoperability for biomedical text processing | 2.7 | 143 | Citations (PDF) |
| 236 | An Epistatic Interaction between the PAX8 and STK17B Genes in Papillary Thyroid Cancer Susceptibility | 2.3 | 9 | Citations (PDF) |
| 237 | Interpretation of the Consequences of Mutations in Protein Kinases: Combined Use of Bioinformatics and Text Mining | 2.8 | 9 | Citations (PDF) |
| 238 | How to link ontologies and protein-protein interactions to literature: text-mining approaches and the BioCreative experience | 2.7 | 28 | Citations (PDF) |
| 239 | JDet: interactive calculation and visualization of function-related conservation patterns in multiple sequence alignments and structures | 4.7 | 23 | Citations (PDF) |
| 240 | Comparative Proteomics Reveals a Significant Bias Toward Alternative Protein Isoforms with Conserved Structure and Function | 4.7 | 74 | Citations (PDF) |
| 241 | ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data | 15.5 | 53 | Citations (PDF) |
| 242 | Text mining for the biocuration workflow | 2.7 | 140 | Citations (PDF) |
| 243 | Mirroring co-evolving trees in the light of their topologies | 4.7 | 7 | Citations (PDF) |
| 244 | Novel domain combinations in proteins encoded by chimeric transcripts | 4.7 | 39 | Citations (PDF) |
| 245 | BioCreative-2012 Virtual Issue | 2.7 | 19 | Citations (PDF) |
| 246 | Getting personalized cancer genome analysis into the clinic: the challenges in bioinformatics | 9.6 | 25 | Citations (PDF) |
| 247 | EnrichNet: network-based gene set enrichment analysis | 4.7 | 289 | Citations (PDF) |
| 248 | The Ras protein superfamily: Evolutionary tree and role of conserved amino acids | 5.4 | 353 | Citations (PDF) |
| 249 | GENCODE: The reference human genome annotation for The ENCODE Project | 4.6 | 4,623 | Citations (PDF) |
| 250 | Chimeras taking shape: Potential functions of proteins encoded by chimeric RNA transcripts | 4.6 | 150 | Citations (PDF) |
| 251 | MyMiner: a web application for computer-assisted biocuration and text annotation | 4.7 | 48 | Citations (PDF) |
| 252 | Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia | 25.2 | 579 | Citations (PDF) |
| 253 | Genome-wide analysis of Pax8 binding provides new insights into thyroid functions | 3.3 | 41 | Citations (PDF) |
| 254 | Uncovering the Molecular Machinery of the Human Spindle—An Integration of Wet and Dry Systems Biology | 2.3 | 14 | Citations (PDF) |
| 255 | Evidence for Transcript Networks Composed of Chimeric RNAs in Human Cells | 2.3 | 62 | Citations (PDF) |
| 256 | Distinct DNA methylomes of newborns and centenarians | 7.5 | 763 | Citations (PDF) |
| 257 | BLUEPRINT to decode the epigenetic signature written in blood | 29.8 | 342 | Citations (PDF) |
| 258 | Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia | 37.9 | 1,432 | Citations (PDF) |
| 259 | Towards the prediction of protein interaction partners using physical docking | 6.7 | 105 | Citations (PDF) |
| 260 | Selection of organisms for the co-evolution-based study of protein interactions | 3.0 | 13 | Citations (PDF) |
| 261 | No paradox, no progress: inverse cancer comorbidity in people with other complex diseases | 27.4 | 133 | Citations (PDF) |
| 262 | Characterization of pathogenic germline mutations in human Protein Kinases | 3.0 | 10 | Citations (PDF) |
| 263 | Overview of the BioCreative III Workshop | 3.0 | 93 | Citations (PDF) |
| 264 | The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text | 3.0 | 127 | Citations (PDF) |
| 265 | Text Mining for Drugs and Chemical Compounds: Methods, Tools and Applications | 2.5 | 74 | Citations (PDF) |
| 266 | Assessment of copy number variation using the Illumina Infinium 1M SNP-array: a comparison of methodological approaches in the Spanish Bladder Cancer/EPICURO study | 4.5 | 63 | Citations (PDF) |
| 267 | Long-Range Epigenetic Silencing Associates with Deregulation of Ikaros Targets in Colorectal Cancer Cells | 3.1 | 48 | Citations (PDF) |
| 268 | firestar —advances in the prediction of functionally important residues | 15.5 | 59 | Citations (PDF) |
| 269 | Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia | 25.2 | 936 | Citations (PDF) |
| 270 | Extending pathways and processes using molecular interaction networks to analyse cancer genome data | 3.0 | 44 | Citations (PDF) |
| 271 | Predicted residue–residue contacts can help the scoring of 3D models | 2.6 | 31 | Citations (PDF) |
| 272 | Mutated genes, pathways and processes in tumours | 5.2 | 35 | Citations (PDF) |
| 273 | The FEBS Letters/BioCreative II.5 experiment: making biological information accessible | 29.8 | 44 | Citations (PDF) |
| 274 | FragKB: Structural and Literature Annotation Resource of Conserved Peptide Fragments and Residues | 2.3 | 7 | Citations (PDF) |
| 275 | Inference of Functional Relations in Predicted Protein Networks with a Machine Learning Approach | 2.3 | 13 | Citations (PDF) |
| 276 | MidA is a putative methyltransferase that is required for mitochondrial complex I function | 2.4 | 54 | Citations (PDF) |
| 277 | Protein interactions and ligand binding: From protein subfamilies to functional specificity | 7.5 | 142 | Citations (PDF) |
| 278 | An Overview of BioCreative II.5 | 2.9 | 88 | Citations (PDF) |
| 279 | TopoGSA: network topological gene set analysis | 4.7 | 63 | Citations (PDF) |
| 280 | The dynamic DNA methylomes of double-stranded DNA viruses associated with human cancer | 4.6 | 232 | Citations (PDF) |
| 281 | Bionemo: molecular information on biodegradation metabolism | 15.5 | 56 | Citations (PDF) |
| 282 | PLAN2L: a web tool for integrated text mining and literature-based bioentity relation extraction | 15.5 | 27 | Citations (PDF) |
| 283 | EcID. A database for the inference of functional interactions in E. coli | 15.5 | 28 | Citations (PDF) |
| 284 | Automated Alphabet Reduction for Protein Datasets | 3.0 | 57 | Citations (PDF) |
| 285 | Extraction of human kinase mutations from literature, databases and genotyping studies | 3.0 | 32 | Citations (PDF) |
| 286 | An integrated approach to the interpretation of Single Amino Acid Polymorphisms within the framework of CATH and Gene3D | 3.0 | 9 | Citations (PDF) |
| 287 | Cancer‐associated mutations are preferentially distributed in protein kinase functional sites | 2.6 | 26 | Citations (PDF) |
| 288 | From cancer genomes to cancer models: bridging the gaps | 5.2 | 34 | Citations (PDF) |
| 289 | Systemic approaches to biodegradation | 10.6 | 65 | Citations (PDF) |
| 290 | Creating Reference Datasets for Systems Biology Applications Using Text Mining | 4.0 | 13 | Citations (PDF) |
| 291 | Structure-Based Prediction of the Saccharomyces cerevisiae SH3–Ligand Interactions | 4.1 | 33 | Citations (PDF) |
| 292 | Translational disease interpretation with molecular networks | 12.2 | 25 | Citations (PDF) |
| 293 | Sequence-based feature prediction and annotation of proteins | 12.2 | 55 | Citations (PDF) |
| 294 | Bioinformatics and cancer research: building bridges for translational research | 2.1 | 16 | Citations (PDF) |
| 295 | À la carte transcriptional regulators: unlocking responses of the prokaryotic enhancer-binding protein XylR to non-natural effectors | 2.5 | 61 | Citations (PDF) |
| 296 | Predicting functional residues in Plasmodium falciparum plasmepsins by combining sequence and structural analysis with molecular dynamics simulations | 2.6 | 20 | Citations (PDF) |
| 297 | Protein co-evolution, co-adaptation and interactions | 7.3 | 161 | Citations (PDF) |
| 298 | Enhancing the prediction of protein pairings between interacting families using orthology information | 3.0 | 24 | Citations (PDF) |
| 299 | Defining functional distances over Gene Ontology | 3.0 | 57 | Citations (PDF) |
| 300 | Co‐evolution and co‐adaptation in protein networks | 2.7 | 42 | Citations (PDF) |
| 301 | A text‐mining perspective on the requirements for electronically annotated abstracts | 2.7 | 45 | Citations (PDF) |
| 302 | Linking genes to literature: text mining, information extraction, and retrieval applications for biology | 8.1 | 189 | Citations (PDF) |
| 303 | Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge | 12.2 | 169 | Citations (PDF) |
| 304 | Proteomics studies confirm the presence of alternative protein isoforms on a large scale | 12.2 | 58 | Citations (PDF) |
| 305 | Text mining for biology - the way forward: opinions from leading scientists | 12.2 | 77 | Citations (PDF) |
| 306 | Overview of the protein-protein interaction annotation extraction task of BioCreative II | 12.2 | 209 | Citations (PDF) |
| 307 | High-confidence prediction of global interactomes based on genome-wide coevolutionary networks | 7.5 | 179 | Citations (PDF) |
| 308 | Determination and validation of principal gene products | 4.7 | 23 | Citations (PDF) |
| 309 | Progress and challenges in predicting protein-protein interaction sites | 6.6 | 159 | Citations (PDF) |
| 310 | Interoperability with Moby 1.0--It's better than sharing your toothbrush! | 6.6 | 94 | Citations (PDF) |
| 311 | iHOP web services | 15.5 | 107 | Citations (PDF) |
| 312 | The implications of alternative splicing in the ENCODE protein complement | 7.5 | 209 | Citations (PDF) |
| 313 | firestar--prediction of functionally important residues using structural templates and alignment reliability | 15.5 | 96 | Citations (PDF) |
| 314 | CARGO: a web portal to integrate customized biological information | 15.5 | 16 | Citations (PDF) |
| 315 | Modular organization in the reductive evolution of protein-protein interaction networks | 12.2 | 29 | Citations (PDF) |
| 316 | Assessment of intramolecular contact predictions for CASP7 | 2.6 | 72 | Citations (PDF) |
| 317 | Assessment of predictions submitted for the CASP7 function prediction category | 2.6 | 55 | Citations (PDF) |
| 318 | Filamin-A regulates actin-dependent clustering of HIV receptors | 16.3 | 172 | Citations (PDF) |
| 319 | Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project | 37.9 | 4,877 | Citations (PDF) |
| 320 | Title is missing! | 12.2 | 42 | Citations (PDF) |
| 321 | The three-dimensional structure of an eukaryotic glutamine synthetase: Functional implications of its oligomeric structure | 2.3 | 63 | Citations (PDF) |
| 322 | Title is missing! | 3.0 | 18 | Citations (PDF) |
| 323 | Phylogeny-independent detection of functional residues | 4.7 | 63 | Citations (PDF) |
| 324 | Bioinformatics in the human interactome project | 4.7 | 16 | Citations (PDF) |
| 325 | TSEMA: interactive prediction of protein pairings between interacting families | 15.5 | 28 | Citations (PDF) |
| 326 | TreeDet: a web server to explore sequence space | 15.5 | 24 | Citations (PDF) |
| 327 | Semantic Mining in Biomedicine (Introduction to the papers selected from the SMBM 2005 Symposium, Hinxton, U.K., April 2005) | 4.7 | 3 | Citations (PDF) |
| 328 | Death inducer obliterator protein 1 in the context of DNA regulation. Sequence analyses of distant homologues point to a novel functional role | 5.4 | 40 | Citations (PDF) |
| 329 | Text-mining approaches in molecular biology and biomedicine | 6.6 | 127 | Citations (PDF) |
| 330 | Automatic annotation of protein function | 6.4 | 112 | Citations (PDF) |
| 331 | Scoring docking models with evolutionary information | 2.6 | 41 | Citations (PDF) |
| 332 | Domain definition and target classification for CASP6 | 2.6 | 26 | Citations (PDF) |
| 333 | Assessment of predictions submitted for the CASP6 comparative modeling category | 2.6 | 103 | Citations (PDF) |
| 334 | CASP6 assessment of contact prediction | 2.6 | 87 | Citations (PDF) |
| 335 | Implementing the iHOP concept for navigation of biomedical literature | 4.7 | 193 | Citations (PDF) |
| 336 | A framework for computational and experimental methods: Identifying dimerization residues in CCR chemokine receptors | 4.7 | 11 | Citations (PDF) |
| 337 | Do you do text? | 4.7 | 6 | Citations (PDF) |
| 338 | EVAcon: a protein contact prediction evaluation service | 15.5 | 20 | Citations (PDF) |
| 339 | Title is missing! | 12.2 | 182 | Citations (PDF) |
| 340 | SQUARE--determining reliable regions in sequence alignments | 4.7 | 19 | Citations (PDF) |
| 341 | MetaRouter: bioinformatics for bioremediation | 15.5 | 67 | Citations (PDF) |
| 342 | YAdumper: extracting and translating large information volumes from relational databases to structured flat files | 4.7 | 1 | Citations (PDF) |
| 343 | HCAD, closing the gap between breakpoints and genes | 15.5 | 9 | Citations (PDF) |
| 344 | IntAct: an open source molecular interaction database | 15.5 | 929 | Citations (PDF) |
| 345 | A gene network for navigating the literature | 25.2 | 452 | Citations (PDF) |
| 346 | Identification of amino acid residues crucial for chemokine receptor dimerization | 23.6 | 182 | Citations (PDF) |
| 347 | The small GTP-binding protein, Rhes, regulates signal transduction from G protein-coupled receptors | 6.5 | 98 | Citations (PDF) |
| 348 | Title is missing! | 3.0 | 38 | Citations (PDF) |
| 349 | Solution structure of the hypothetical protein Mth677 fromMethanobacterium thermoautotrophicum: A novel α+β fold | 5.9 | 2 | Citations (PDF) |
| 350 | Structural model of carnitine palmitoyltransferase I based on the carnitine acetyltransferase crystal | 3.8 | 42 | Citations (PDF) |
| 351 | Phage-display and correlated mutations identify an essential region of subdomain 1C involved in homodimerization of Escherichia coli FtsA | 2.6 | 36 | Citations (PDF) |
| 352 | Protein interaction: same network, different hubs | 9.8 | 24 | Citations (PDF) |
| 353 | Life cycles of successful genes | 9.8 | 67 | Citations (PDF) |
| 354 | The single tryptophan of the PsbQ protein of photosystem II is at the end of a 4-α-helical bundle domain | 0.2 | 10 | Citations (PDF) |
| 355 | Automatic annotation of protein function based on family identification | 2.6 | 53 | Citations (PDF) |
| 356 | CAFASP3 in the spotlight of EVA | 2.6 | 32 | Citations (PDF) |
| 357 | The organization of the microbial biodegradation network from a systems‐biology perspective | 5.2 | 64 | Citations (PDF) |
| 358 | Early bioinformatics: the birth of a discipline--a personal view | 4.7 | 116 | Citations (PDF) |
| 359 | Automatic Methods for Predicting Functionally Important Residues | 4.1 | 203 | Citations (PDF) |
| 360 | Predicting Reliable Regions in Protein Alignments from Sequence Profiles | 4.1 | 54 | Citations (PDF) |
| 361 | META, METAN AND CYBER SERVERS | 4.7 | 5 | Citations (PDF) |
| 362 | Structural (βα)8 TIM Barrel Model of 3-Hydroxy-3-methylglutaryl-Coenzyme A Lyase | 2.2 | 17 | Citations (PDF) |
| 363 | EVA: evaluation of protein structure prediction servers | 15.5 | 156 | Citations (PDF) |
| 364 | Identification of Conserved Amino Acid Residues in Rat Liver Carnitine Palmitoyltransferase I Critical for Malonyl-CoA Inhibition | 2.2 | 66 | Citations (PDF) |
| 365 | Reductive genome evolution in Buchnera aphidicola | 7.5 | 488 | Citations (PDF) |
| 366 | Involvement of Intramolecular Interactions in the Regulation of G Protein-Coupled Receptor Kinase 2 | 2.6 | 8 | Citations (PDF) |
| 367 | Evaluation of annotation strategies using an entire genome sequence | 4.7 | 68 | Citations (PDF) |
| 368 | Structural Model of a Malonyl-CoA-binding Site of Carnitine Octanoyltransferase and Carnitine Palmitoyltransferase I | 2.2 | 41 | Citations (PDF) |
| 369 | Bioinformatics in structural genomics | 4.7 | 6 | Citations (PDF) |
| 370 | BIOINFORMATICS: BIOLOGY BY OTHER MEANS | 4.7 | 9 | Citations (PDF) |
| 371 | Information extraction in molecular biology | 6.6 | 87 | Citations (PDF) |
| 372 | Clustering of proximal sequence space for the identification of protein families | 4.7 | 58 | Citations (PDF) |
| 373 | Bioinformatics methods for the analysis of expression arrays: data clustering and information extraction | 3.8 | 49 | Citations (PDF) |
| 374 | MARVEL: a conserved domain involved in membrane apposition events | 6.7 | 222 | Citations (PDF) |
| 375 | Computational methods for the prediction of protein interactions | 6.4 | 331 | Citations (PDF) |
| 376 | Analysis of the Cellular Functions of Escherichia coli Operons and Their Conservation in Bacillus subtilis | 1.7 | 37 | Citations (PDF) |
| 377 | Prediction of protein-protein interaction sites in heterocomplexes with neural networks | 0.2 | 234 | Citations (PDF) |
| 378 | In silico two-hybrid system for the selection of physically interacting protein pairs | 2.6 | 247 | Citations (PDF) |
| 379 | Bioinformatics and Computational Biology at the crossroads of post-genomic technology | 6.3 | 2 | Citations (PDF) |
| 380 | Search and retrieve | 5.2 | 22 | Citations (PDF) |
| 381 | A hierarchical unsupervised growing neural network for
clustering gene expression patterns | 4.7 | 572 | Citations (PDF) |
| 382 | Mining functional information associated with expression arrays | 2.9 | 64 | Citations (PDF) |
| 383 | Escherichia coli FtsZ polymers contain mostly GTP and have a high nucleotide turnover | 2.5 | 86 | Citations (PDF) |
| 384 | Threading structural model of the manganese-stabilizing protein PsbO reveals presence of two possible ?-sandwich domains | 2.6 | 21 | Citations (PDF) |
| 385 | CAFASP2: The second critical assessment of fully automated structure prediction methods | 2.6 | 132 | Citations (PDF) |
| 386 | Improvement in affinity and HIV-1 neutralization by somatic mutation in the heavy chain first complementarity-determining region of antibodies triggered by HIV-1 infection | 3.2 | 5 | Citations (PDF) |
| 387 | Bringing gene order into bacterial shape | 9.8 | 118 | Citations (PDF) |
| 388 | Intrinsic errors in genome annotation | 9.8 | 270 | Citations (PDF) |
| 389 | Similarity of phylogenetic trees as indicator of protein–protein interaction | 2.6 | 449 | Citations (PDF) |
| 390 | Structural Model of the Catalytic Core of Carnitine Palmitoyltransferase I and Carnitine Octanoyltransferase (COT) | 2.2 | 55 | Citations (PDF) |
| 391 | Prediction of contact maps with neural networks and correlated mutations | 2.6 | 176 | Citations (PDF) |
| 392 | Practical limits of function prediction | 2.6 | 317 | Citations (PDF) |
| 393 | Three-dimensional view of the surface motif associated with the P-loop structure: cis and trans cases of convergent evolution 1 1Edited by J. Thornton | 4.1 | 78 | Citations (PDF) |
| 394 | Title is missing! | 12.2 | 40 | Citations (PDF) |
| 395 | A platform for integrating threading results with protein family analyses | 4.7 | 10 | Citations (PDF) |
| 396 | Effector Recognition by the Small GTP-binding Proteins Ras and Ral | 2.2 | 78 | Citations (PDF) |
| 397 | Molecular analysis of HIV-1 gp120 antibody response using isotype IgM and IgG phage display libraries from a long-term non-progressor HIV-1-infected individual | 3.2 | 24 | Citations (PDF) |
| 398 | Model of the Ran-RCC1 Interaction using Biochemical and Docking Experiments | 4.1 | 53 | Citations (PDF) |
| 399 | Effective use of sequence correlation and conservation in fold recognition 1 1Edited by J. M. Thornton | 4.1 | 158 | Citations (PDF) |
| 400 | Structural model of Dex protein fromPenicillium minioluteumand its implications in the mechanism of catalysis 1998, 31, 345-354 | | 6 | Citations (PDF) |
| 401 | Structural model for family 32 of glycosyl-hydrolase enzymes 1998, 33, 383-395 | | 59 | Citations (PDF) |
| 402 | Shaping of Drosophila Alcohol Dehydrogenase Through Evolution: Relationship with Enzyme Functionality | 1.7 | 24 | Citations (PDF) |
| 403 | Distribution and functional diversification of the ras superfamily inSaccharomyces cerevisiae | 2.7 | 57 | Citations (PDF) |
| 404 | Mutations in the DnaK chaperone affecting interaction with the DnaJ cochaperone | 7.5 | 171 | Citations (PDF) |
| 405 | Sequence analysis of the Methanococcus jannaschii genome and the prediction of protein function | 4.7 | 16 | Citations (PDF) |
| 406 | Correlated mutations contain information about protein-protein interaction 1 1Edited by A. R. Fersht | 4.1 | 509 | Citations (PDF) |
| 407 | Classification of protein families and detection of the determinant residues with an improved self-organizing map | 1.5 | 46 | Citations (PDF) |
| 408 | Genomes with distinct function composition | 2.7 | 22 | Citations (PDF) |
| 409 | Computational comparisons of model genomes | 8.7 | 28 | Citations (PDF) |
| 410 | Novelties from the complete genome of Mycoplasma genitalium | 2.5 | 37 | Citations (PDF) |
| 411 | A method to predict functional residues in proteins | 8.8 | 398 | Citations (PDF) |
| 412 | Eukaryotic translation elongation factor 1γ contains a glutathione transferase domain—Study of a diverse, ancient protein super family using motif search and structural modeling | 5.9 | 147 | Citations (PDF) |
| 413 | Correlated mutations and residue contacts in proteins | 2.6 | 839 | Citations (PDF) |
| 414 | A conserved loop in the ATPase domain of the DnaK chaperone is essential for stable binding of GrpE | 8.8 | 125 | Citations (PDF) |
| 415 | Convergent evolution of similar enzymatic function on different protein folds: The hexokinase, ribokinase, and galactokinase families of sugar kinases | 5.9 | 371 | Citations (PDF) |
| 416 | A new ATP-binding fold in actin, hexokinase and Hsc70 | 12.1 | 91 | Citations (PDF) |
| 417 | How does the switch II region of G-domains work? | 2.7 | 77 | Citations (PDF) |
| 418 | The ras protein family: evolutionary tree and role of conserved amino acids | 2.4 | 572 | Citations (PDF) |
| 419 | <i>MIB2</i>variants altering NOTCH signalling result in left ventricle hypertrabeculation/non-compaction and are associated with Ménétrier-like gastropathy | 2.9 | 7 | Citations (PDF) |
| 420 | The pseudo GTPase CENP-M drives human kinetochore assembly | 1.6 | 126 | Citations (PDF) |
| 421 | Patient-specific Boolean models of signalling networks guide personalised treatments | 1.6 | 83 | Citations (PDF) |
| 422 | myAURA
: a personalized health library for epilepsy management via knowledge graph sparsification and visualization | 3.5 | 2 | Citations (PDF) |
| 423 | Constraint based modeling of drug induced metabolic changes in a cancer cell line | 2.9 | 0 | Citations (PDF) |
| 424 | Antidepressant and Antipsychotic Drug Use and Cancer Risk: Protocol for an Overview of Systematic Reviews and Meta-Analyses | 0.0 | 0 | Citations (PDF) |
| 425 | Sex-specific transcriptome similarity networks elucidate comorbidity relationships | 4.5 | 0 | Citations (PDF) |
