| 1 | Journal of Clinical Microbiology | 42 | 4.8K | 18 | 11 |
| 2 | Nature Genetics | 5 | 3.2K | 2118 | 2113 |
| 3 | Lancet Infectious Diseases, The | 8 | 1.5K | 127 | 428 |
| 4 | PLoS ONE | 18 | 1.2K | 598 | 977 |
| 5 | BMC Microbiology | 4 | 1.1K | 82 | 13 |
| 6 | Lancet Respiratory Medicine,the | 4 | 997 | 219 | 360 |
| 7 | Proceedings of the National Academy of Sciences of the United States of America | 1 | 958 | 57757 | 8579 |
| 8 | PLoS Pathogens | 5 | 934 | 751 | 304 |
| 9 | European Respiratory Journal | 13 | 894 | 227 | 458 |
| 10 | Antimicrobial Agents and Chemotherapy | 20 | 870 | 183 | 453 |
| 11 | American Journal of Respiratory and Critical Care Medicine | 6 | 868 | 850 | 950 |
| 12 | Nature Communications | 3 | 781 | 19415 | 8444 |
| 13 | New England Journal of Medicine | 3 | 721 | 2389 | 11104 |
| 14 | PLoS Medicine | 2 | 581 | 1518 | 905 |
| 15 | Nature | 1 | 571 | 31989 | 37325 |
| 16 | PLoS Biology | 1 | 536 | 2552 | 1069 |
| 17 | Emerging Infectious Diseases | 12 | 394 | 99 | 731 |
| 18 | BMC Infectious Diseases | 8 | 391 | 94 | 104 |
| 19 | Nature Reviews Microbiology | 1 | 372 | 584 | 1523 |
| 20 | Scientific Reports | 8 | 364 | 2140 | 5782 |
| 21 | Journal of Antimicrobial Chemotherapy | 6 | 349 | 684 | 688 |
| 22 | Nucleic Acids Research | 1 | 301 | 16415 | 6839 |
| 23 | MBio | 2 | 292 | 2021 | 1076 |
| 24 | Tuberculosis | 6 | 264 | 59 | 64 |
| 25 | Lancet Microbe, The | 1 | 256 | 194 | 163 |
| 26 | Genome Medicine | 5 | 251 | 47 | 498 |
| 27 | Microbial Genomics | 5 | 187 | 74 | 90 |
| 28 | Cell Host and Microbe | 1 | 180 | 1613 | 3086 |
| 29 | International Journal of Tuberculosis and Lung Disease | 5 | 179 | 46 | 35 |
| 30 | EBioMedicine | 2 | 176 | 581 | 1197 |
| 31 | Wellcome Open Research | 1 | 174 | 2660 | 314 |
| 32 | Clinical Infectious Diseases | 3 | 173 | 2918 | 4810 |
| 33 | Infection, Genetics and Evolution | 7 | 161 | 113 | 492 |
| 34 | Respiratory Research | 2 | 160 | 684 | 530 |
| 35 | Infection and Immunity | 1 | 158 | 4622 | 2750 |
| 36 | Clinical Microbiology and Infection | 3 | 143 | 348 | 709 |
| 37 | Frontiers in Immunology | 2 | 127 | 7098 | 7149 |
| 38 | Eurosurveillance | 3 | 99 | 347 | 912 |
| 39 | Human Molecular Genetics | 1 | 97 | 7450 | 9048 |
| 40 | Cold Spring Harbor Perspectives in Medicine | 1 | 67 | 77 | 818 |
| 41 | BMC Pulmonary Medicine | 1 | 66 | 1026 | 756 |
| 41 | Clinical Microbiology Reviews | 1 | 66 | 189 | 1098 |
| 43 | Bioinformatics | 1 | 59 | 6803 | 8424 |
| 44 | Advances in Experimental Medicine and Biology | 1 | 56 | 3547 | 2474 |
| 45 | Frontiers in Microbiology | 2 | 53 | 6376 | 16706 |
| 46 | Molecular Biology and Evolution | 1 | 47 | 3242 | 6260 |
| 47 | Microbiology Spectrum | 6 | 45 | 49 | 1292 |
| 48 | Journal of Microbiological Methods | 1 | 40 | 1163 | 1742 |
| 49 | Genes | 2 | 37 | 2179 | 5078 |
| 50 | Journal of Infectious Diseases | 1 | 35 | 6735 | 11360 |
| 51 | Journal of Clinical Investigation | 1 | 34 | 8306 | 27451 |
| 52 | Biosensors and Bioelectronics | 1 | 32 | 6002 | 12770 |
| 53 | International Journal of Infectious Diseases | 1 | 31 | 2704 | 4668 |
| 53 | MSphere | 1 | 31 | 1163 | 2574 |
| 55 | International Journal of Medical Microbiology | 1 | 29 | 476 | 1231 |
| 56 | BMC Medicine | 1 | 28 | 2222 | 6986 |
| 57 | Lancet, The | 1 | 23 | 11039 | 24652 |
| 57 | Science Advances | 1 | 23 | 13656 | 65002 |
| 57 | American Journal of Tropical Medicine and Hygiene | 1 | 23 | 2889 | 5147 |
| 60 | European Respiratory Review | 1 | 20 | 375 | 1390 |
| 61 | Applied and Environmental Microbiology | 1 | 19 | 7861 | 17442 |
| 62 | Infection and Drug Resistance | 1 | 18 | 1434 | 2692 |
| 62 | Nature Microbiology | 1 | 18 | 1678 | 8505 |
| 64 | ERJ Open Research | 1 | 15 | 1516 | 2471 |
| 65 | Genomics | 1 | 11 | 1906 | 7083 |
| 66 | Molecular Phylogenetics and Evolution | 1 | 10 | 3000 | 7192 |
| 67 | Tuberculosis Research and Treatment | 1 | 9 | 25 | 201 |
| 68 | Journal of Hospital Infection | 1 | 8 | 345 | 1223 |
| 68 | Diagnostic Microbiology and Infectious Disease | 1 | 8 | 1344 | 4080 |
| 68 | JAC-Antimicrobial Resistance | 1 | 8 | 219 | 671 |
| 71 | Advances in Infectious Diseases | 1 | 7 | 33 | 29 |
| 72 | JMIR Research Protocols | 1 | 3 | 2637 | 16328 |
| 73 | BMC Genomics | 1 | 2 | 7424 | 27197 |
| 73 | Revue D'Elevage Et De Medecine Veterinaire Des Pays Tropicaux | 1 | 2 | 61 | 127 |
| 75 | Enfermedades Infecciosas Y Microbiología Clínica | 1 | 1 | 575 | 1159 |
| 75 | Pneumologe | 2 | 1 | 8 | 24 |