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85 peer-reviewed articles • 10,795 peer-reviewed citations • Sorted by year • Download PDF (PDF by citations)
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1Microbiomes should be incorporated into The One Health Joint Plan of Action
2025, 46, 53-55
3Citations (PDF)
2Rethinking assumptions about plant litter decomposition
BioScience, 2025, 75, 490-498
3.918Citations (PDF)
3Investigating bacterial evolution in nature with metagenomics7.01Citations (PDF)
4Microbial dispersal into surface soil is limited on a meter scale
ISME Journal, 2025, 19,
9.15Citations (PDF)
5The contribution of plasmids to trait diversity in a soil bacterium5.45Citations (PDF)
6Priorities, opportunities, and challenges for integrating microorganisms into Earth system models for climate change prediction
MBio, 2024, 15,
4.442Citations (PDF)
7Investigating eco-evolutionary processes of microbial community assembly in the wild using a model leaf litter system
ISME Journal, 2024, 18,
9.115Citations (PDF)
8Short-term dietary fiber interventions produce consistent gut microbiome responses across studies
MSystems, 2024, 9,
4.424Citations (PDF)
9Bacterial population-level trade-offs between drought tolerance and resource acquisition traits impact decomposition
ISME Journal, 2024, 18,
9.119Citations (PDF)
10Plasmid-Encoded Traits Vary across Environments
MBio, 2023, 14,
4.440Citations (PDF)
11Functional significance of microbial diversity in arid soils: biological soil crusts and nitrogen fixation as a model system2.814Citations (PDF)
12Curated and harmonized gut microbiome 16S rRNA amplicon data from dietary fiber intervention studies in humans
Scientific Data, 2023, 10,
5.73Citations (PDF)
13Life history strategies of soil bacterial communities across global terrestrial biomes
Nature Microbiology, 2023, 8, 2093-2102
16.0160Citations (PDF)
14Desiccation induces varied responses within a soil bacterial genus
Environmental Microbiology, 2023, 25, 3075-3086
3.719Citations (PDF)
15Testing the contribution of dispersal to microbial succession following a wildfire
MSystems, 2023, 8,
4.413Citations (PDF)
16Differential Response of Bacterial Microdiversity to Simulated Global Change3.614Citations (PDF)
17Bacterial community response to environmental change varies with depth in the surface soil10.555Citations (PDF)
18Routes and rates of bacterial dispersal impact surface soil microbiome composition and functioning
ISME Journal, 2022, 16, 2295-2304
9.167Citations (PDF)
19Microbial community response to a decade of simulated global changes depends on the plant community
Elementa, 2021, 9,
3.525Citations (PDF)
20Adaptive differentiation and rapid evolution of a soil bacterium along a climate gradient7.5120Citations (PDF)
21High-Fiber, Whole-Food Dietary Intervention Alters the Human Gut Microbiome but Not Fecal Short-Chain Fatty Acids
MSystems, 2021, 6,
4.4165Citations (PDF)
22Evolutionary relationships among bifidobacteria and their hosts and environments
BMC Genomics, 2020, 21,
3.243Citations (PDF)
23Alpha-, beta-, and gamma-diversity of bacteria varies across habitats
PLoS ONE, 2020, 15, e0233872
2.3243Citations (PDF)
24Cervicovaginal Microbiome Composition Is Associated with Metabolic Profiles in Healthy Pregnancy
MBio, 2020, 11,
4.450Citations (PDF)
25Fiber Force: A Fiber Diet Intervention in an Advanced Course-Based Undergraduate Research Experience (CURE) Course1.517Citations (PDF)
26Phylogenetic conservation of soil bacterial responses to simulated global changes3.763Citations (PDF)
27Conceptual challenges in microbial community ecology3.734Citations (PDF)
28Drought and plant litter chemistry alter microbial gene expression and metabolite production
ISME Journal, 2020, 14, 2236-2247
9.1150Citations (PDF)
29Scientists’ warning to humanity: microorganisms and climate change
Nature Reviews Microbiology, 2019, 17, 569-586
83.41,853Citations (PDF)
30Phylogenetic conservation of bacterial responses to soil nitrogen addition across continents13.776Citations (PDF)
31Predictable Molecular Adaptation of Coevolving Enterococcus faecium and Lytic Phage EfV12-phi13.944Citations (PDF)
32Optimization of a Method To Quantify Soil Bacterial Abundance by Flow Cytometry
MSphere, 2019, 4,
3.042Citations (PDF)
33Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria
MBio, 2019, 10,
4.426Citations (PDF)
34Experimental Evidence that Stochasticity Contributes to Bacterial Composition and Functioning in a Decomposer Community
MBio, 2019, 10,
4.432Citations (PDF)
35Microbial decomposers not constrained by climate history along a Mediterranean climate gradient in southern California
Ecology, 2018, 99, 1441-1452
3.320Citations (PDF)
36Bacterial diversity is positively correlated with soil heterogeneity
Ecosphere, 2018, 9,
2.695Citations (PDF)
37Decomposition responses to climate depend on microbial community composition7.5349Citations (PDF)
38Emergence of soil bacterial ecotypes along a climate gradient
Environmental Microbiology, 2018, 20, 4112-4126
3.746Citations (PDF)
39Comparative Genomics of Nitrogen Cycling Pathways in Bacteria and Archaea
Microbial Ecology, 2018, 77, 597-606
3.340Citations (PDF)
40The effect of soil inoculants on seed germination of native and invasive species
Botany, 2017, 95, 469-480
1.619Citations (PDF)
41Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits
MBio, 2017, 8,
4.463Citations (PDF)
42Dispersal alters bacterial diversity and composition in a natural community
ISME Journal, 2017, 12, 296-299
9.1102Citations (PDF)
43Phylogenetic conservation of substrate use specialization in leaf litter bacteria
PLoS ONE, 2017, 12, e0174472
2.317Citations (PDF)
44Biogeographic Variation in Host Range Phenotypes and Taxonomic Composition of Marine Cyanophage Isolates3.931Citations (PDF)
45Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium3.998Citations (PDF)
46Genomic diversification of marine cyanophages into stable ecotypes
Environmental Microbiology, 2016, 18, 4240-4253
3.754Citations (PDF)
47Global biogeography of microbial nitrogen-cycling traits in soil7.5567Citations (PDF)
48The genomic content and context of auxiliary metabolic genes in marine cyanomyoviruses
Virology, 2016, 499, 219-229
2.3131Citations (PDF)
49Effects of dispersal and selection on stochastic assembly in microbial communities
ISME Journal, 2016, 11, 176-185
9.1425Citations (PDF)
50Nitrification kinetics and ammonia‐oxidizing community respond to warming and altered precipitation
Ecosphere, 2015, 6, 1-17
2.626Citations (PDF)
51Nonlinear responses in salt marsh functioning to increased nitrogen addition
Ecology, 2015, 96, 936-947
3.337Citations (PDF)
52Temporal variation overshadows the response of leaf litter microbial communities to simulated global change
ISME Journal, 2015, 9, 2477-2489
9.1133Citations (PDF)
53Nitrogen addition, not initial phylogenetic diversity, increases litter decomposition by fungal communities3.919Citations (PDF)
54Microbiomes in light of traits: A phylogenetic perspective
Science, 2015, 350,
36.2846Citations (PDF)
55Nitrogen Cycling Potential of a Grassland Litter Microbial Community3.669Citations (PDF)
56Microbial composition alters the response of litter decomposition to environmental change
Ecology, 2015, 96, 154-163
3.387Citations (PDF)
57Microbial response to simulated global change is phylogenetically conserved and linked with functional potential
ISME Journal, 2015, 10, 109-118
9.1153Citations (PDF)
58Cellulolytic potential under environmental changes in microbial communities from grassland litter3.972Citations (PDF)
59Antagonistic Coevolution of Marine Planktonic Viruses and Their Hosts14.185Citations (PDF)
60Abundance of Broad Bacterial Taxa in the Sargasso Sea Explained by Environmental Conditions but Not Water Mass3.635Citations (PDF)
61Relationships between Methylobacteria and Glyphosate with Native and Invasive Plant Species: Implications for Restoration
Restoration Ecology, 2013, 21, 105-113
2.412Citations (PDF)
62Marine cyanophages exhibit local and regional biogeography
Environmental Microbiology, 2013, 15, 1452-1463
3.745Citations (PDF)
63Macroecological patterns of marine bacteria on a global scale
Journal of Biogeography, 2013, 40, 800-811
3.257Citations (PDF)
64Coupled high-throughput functional screening and next generation sequencing for identification of plant polymer decomposing enzymes in metagenomic libraries3.949Citations (PDF)
65Diversity and temporal dynamics of Southern California coastal marine cyanophage isolates
Aquatic Microbial Ecology, 2013, 69, 17-31
1.019Citations (PDF)
66Rapid diversification of coevolving marine Synechococcus and a virus7.5214Citations (PDF)
67Fundamentals of Microbial Community Resistance and Resilience3.91,627Citations (PDF)
68An atomic force microscopy investigation of cyanophage structure
Micron, 2012, 43, 1336-1342
2.29Citations (PDF)
69The Abundance of Pink-Pigmented Facultative Methylotrophs in the Root Zone of Plant Species in Invaded Coastal Sage Scrub Habitat
PLoS ONE, 2012, 7, e31026
2.318Citations (PDF)
70The Effect of Nitrogen Enrichment on C1-Cycling Microorganisms and Methane Flux in Salt Marsh Sediments3.926Citations (PDF)
71Beyond biogeographic patterns: processes shaping the microbial landscape
Nature Reviews Microbiology, 2012, 10, 497-506
83.41,649Citations (PDF)
72Microbial composition affects the functioning of estuarine sediments
ISME Journal, 2012, 7, 868-879
9.1155Citations (PDF)
73Drivers of bacterial β-diversity depend on spatial scale7.5802Citations (PDF)
74Functional Metagenomics Reveals Previously Unrecognized Diversity of Antibiotic Resistance Genes in Gulls3.952Citations (PDF)
75Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems
PLoS ONE, 2011, 6, e24570
2.3600Citations (PDF)
76Nitrogen and phosphorus enrichment alter the composition of ammonia-oxidizing bacteria in salt marsh sediments
ISME Journal, 2010, 4, 933-944
9.146Citations (PDF)
77Patterns of fungal diversity and composition along a salinity gradient
ISME Journal, 2010, 5, 379-388
9.1195Citations (PDF)
78Pathogens promote plant diversity through a compensatory response
Ecology Letters, 2008, 11, 461-469
7.574Citations (PDF)
79Rapid evolution buffers ecosystem impacts of viruses in a microbial food web §
Ecology Letters, 2008, 11, 1178-1188
7.577Citations (PDF)
80It's all relative: ranking the diversity of aquatic bacterial communities
Environmental Microbiology, 2008, 10, 2200-2210
3.7165Citations (PDF)
81Selection and Characterization of Cyanophage Resistance in Marine Synechococcus Strains3.676Citations (PDF)
82A COMPARISON OF TAXON CO-OCCURRENCE PATTERNS FOR MACRO- AND MICROORGANISMS
Ecology, 2007, 88, 1345-1353
3.3236Citations (PDF)
83Is there a cost of virus resistance in marine cyanobacteria?
ISME Journal, 2007, 1, 300-312
9.1143Citations (PDF)
84Testing the functional significance of microbial composition in natural communities
FEMS Microbiology Ecology, 2007, 62, 161-170
2.8183Citations (PDF)
85Alkenone producers inferred from well-preserved 18S rDNA in Greenland lake sediments3.540Citations (PDF)