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437 peer-reviewed articles • 64,988 peer-reviewed citations • Sorted by year • Download PDF (PDF by citations)
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1Transposon-triggered epigenetic chromatin dynamics modulate EFR-related pathogen response5.810Citations (PDF)
2TIPPo: A User-Friendly Tool for De Novo Assembly of Organellar Genomes with High-Fidelity Data3.123Citations (PDF)
3Long-term human influence on the demography and genetic diversity of the hyperdominant Bertholletia excelsa in the Amazon Basin
Current Biology, 2025, 35, 629-639.e4
2.57Citations (PDF)
4Identification of the male-specific region on the guppy Y Chromosome from a haplotype-resolved assembly
Genome Research, 2025, 35, 489-498
3.36Citations (PDF)
5Species-wide gene editing of a flowering regulator reveals hidden phenotypic variation
PLoS Biology, 2025, 23, e3003226
3.14Citations (PDF)
6Arabidopsis PRMT5 buffers pre‐ mRNA splicing and development against genetic variation in donor splice sites
New Phytologist, 2025, 247, 1727-1741
5.35Citations (PDF)
7Minimizing detection bias of somatic mutations in a highly heterozygous oak genome1.412Citations (PDF)
8Joanne Chory (1955–2024): Plant geneticist extraordinaire5.20Citations (PDF)
9Long-read detection of transposable element mobilization in the soma of hypomethylated Arabidopsis thaliana individuals
Genome Biology, 2025, 26,
4.88Citations (PDF)
10Epiallelic variation at the transcription factor MYBA1 promoter contributes to color differences of berry flesh in grapevine
Plant Physiology, 2025, 198,
4.05Citations (PDF)
11Pangenomic context reveals the extent of intraspecific plant NLR evolution
Cell Host and Microbe, 2025, 33, 1291-1305.e9
12.210Citations (PDF)
12Deleterious phenotypes in wild Arabidopsis arenosa populations are common and linked to runs of homozygosity1.410Citations (PDF)
13Transposon dynamics in the emerging oilseed crop Thlaspi arvense
PLoS Genetics, 2024, 20, e1011141
2.210Citations (PDF)
14Acanthophis: a comprehensive plant hologenomics pipeline1.52Citations (PDF)
15The genetic architecture of repeated local adaptation to climate in distantly related plants
Nature Ecology and Evolution, 2024, 8, 1933-1947
7.649Citations (PDF)
16Continental-scale associations of Arabidopsis thaliana phyllosphere members with host genotype and drought
Nature Microbiology, 2024, 9, 2748-2758
9.931Citations (PDF)
17Atlas of telomeric repeat diversity in Arabidopsis thaliana
Genome Biology, 2024, 25,
4.87Citations (PDF)
18Widespread position-dependent transcriptional regulatory sequences in plants
Nature Genetics, 2024, 56, 2238-2246
14.143Citations (PDF)
19miR472 Deficiency Enhances Arabidopsis thaliana Defense Without Reducing Seed Production2.14Citations (PDF)
20Building pangenome graphs
Nature Methods, 2024, 21, 2008-2012
13.1169Citations (PDF)
21Gretl—variation GRaph Evaluation TooLkit
Bioinformatics, 2024, 41,
3.24Citations (PDF)
22PICLN modulates alternative splicing and light/temperature responses in plants
Plant Physiology, 2023, 191, 1036-1051
4.019Citations (PDF)
23Polymorphic inverted repeats near coding genes impact chromatin topology and phenotypic traits in Arabidopsis thaliana
Cell Reports, 2023, 42, 112029
4.423Citations (PDF)
24Deep haplotype analyses of target‐site resistance locus ACCase in blackgrass enabled by pool‐based amplicon sequencing
Plant Biotechnology Journal, 2023, 21, 1240-1253
6.46Citations (PDF)
25Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass5.245Citations (PDF)
26Cycles of satellite and transposon evolution in Arabidopsis centromeres
Nature, 2023, 618, 557-565
30.6179Citations (PDF)
27Pervasive under-dominance in gene expression underlying emergent growth trajectories in Arabidopsis thaliana hybrids
Genome Biology, 2023, 24,
4.85Citations (PDF)
28The genetic and physiological basis of Arabidopsis thaliana tolerance to Pseudomonas viridiflava
New Phytologist, 2023, 240, 1961-1975
5.314Citations (PDF)
29A new chance for genome editing in Europe
Nature Biotechnology, 2023, 41, 1378-1380
19.78Citations (PDF)
30Spatial metatranscriptomics resolves host–bacteria–fungi interactomes
Nature Biotechnology, 2023, 42, 1384-1393
19.7123Citations (PDF)
31vcf2gwas : Python API for comprehensive GWAS analysis using GEMMA
Bioinformatics, 2022, 38, 839-840
3.250Citations (PDF)
32Mutation bias reflects natural selection in Arabidopsis thaliana
Nature, 2022, 602, 101-105
30.6369Citations (PDF)
33Chromosome‐level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates
Plant Biotechnology Journal, 2022, 20, 944-963
6.460Citations (PDF)
34Rapid genomic convergent evolution in experimental populations of Trinidadian guppies ( Poecilia reticulata )
Evolution Letters, 2022, 6, 149-161
2.319Citations (PDF)
35Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant7.691Citations (PDF)
36Genotyping-by-sequencing-based identification of Arabidopsis pattern recognition receptor RLP32 recognizing proteobacterial translation initiation factor IF110.843Citations (PDF)
37Review: MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data — R0/PR3
2022, ,
0Citations (PDF)
38Review: MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data — R0/PR2
2022, ,
0Citations (PDF)
39Review: MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data — R1/PR8
2022, ,
0Citations (PDF)
40Review: MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data — R1/PR7
2022, ,
0Citations (PDF)
41Predictable and stable epimutations induced during clonal plant propagation with embryonic transcription factor
PLoS Genetics, 2022, 18, e1010479
2.218Citations (PDF)
42Pushing the limits of HiFi assemblies reveals centromere diversity between two Arabidopsis thaliana genomes
Nucleic Acids Research, 2022, 50, 12309-12327
10.746Citations (PDF)
43Canalization of genome-wide transcriptional activity in Arabidopsis thaliana accessions by MET1-dependent CG methylation
Genome Biology, 2022, 23,
4.830Citations (PDF)
44Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere5.235Citations (PDF)
45Rapid weed adaptation and range expansion in response to agriculture over the past two centuries
Science, 2022, 378, 1079-1085
26.182Citations (PDF)
46A Truncated Singleton NLR Causes Hybrid Necrosis in Arabidopsis thaliana3.143Citations (PDF)
47Male‐specific Y‐chromosomal regions in waterhemp (Amaranthus tuberculatus) and Palmer amaranth (Amaranthus palmeri)
New Phytologist, 2021, 229, 3522-3533
5.329Citations (PDF)
48The population genomics of adaptive loss of function
Heredity, 2021, 126, 383-395
1.473Citations (PDF)
49Plant NLR diversity: the known unknowns of pan-NLRomes
Plant Cell, 2021, 33, 814-831
5.8214Citations (PDF)
50HASTY modulates miRNA biogenesis by linking pri-miRNA transcription and processing
Molecular Plant, 2021, 14, 426-439
17.9104Citations (PDF)
51Population structure and evolution of resistance to acetolactate synthase (ALS)‐inhibitors in Amaranthus tuberculatus in Italy
Pest Management Science, 2021, 77, 2971-2980
2.710Citations (PDF)
52Genetic Mapping by Sequencing More Precisely Detects Loci Responsible for Anaerobic Germination Tolerance in Rice
Plants, 2021, 10, 705
2.514Citations (PDF)
53Drainage-structuring of ancestral variation and a common functional pathway shape limited genomic convergence in natural high- and low-predation guppies
PLoS Genetics, 2021, 17, e1009566
2.230Citations (PDF)
54The genetic architecture and population genomic signatures of glyphosate resistance in Amaranthus tuberculatus
Molecular Ecology, 2021, 30, 5373-5389
2.233Citations (PDF)
55One Hundred Years of Hybrid Necrosis: Hybrid Autoimmunity as a Window into the Mechanisms and Evolution of Plant–Pathogen Interactions7.347Citations (PDF)
56The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity
Nature, 2021, 598, 495-499
30.6445Citations (PDF)
57Multiple Sources of Introduction of North American Arabidopsis thaliana from across Eurasia
Molecular Biology and Evolution, 2021, 38, 5328-5344
3.115Citations (PDF)
58Commensal Pseudomonas protect Arabidopsis thaliana from a coexisting pathogen via multiple lineage-dependent mechanisms
ISME Journal, 2021, 16, 1235-1244
5.937Citations (PDF)
59AraPheno and the AraGWAS Catalog 2020: a major database update including RNA-Seq and knockout mutation data for Arabidopsis thaliana10.755Citations (PDF)
60Draft Genomes of Amaranthus tuberculatus, Amaranthus hybridus, and Amaranthus palmeri
Genome Biology and Evolution, 2020, 12, 1988-1993
1.777Citations (PDF)
61Improved Reference Genome Uncovers Novel Sex-Linked Regions in the Guppy (Poecilia reticulata)
Genome Biology and Evolution, 2020, 12, 1789-1805
1.751Citations (PDF)
62Combining whole-genome shotgun sequencing and rRNA gene amplicon analyses to improve detection of microbe–microbe interaction networks in plant leaves
ISME Journal, 2020, 14, 2116-2130
5.995Citations (PDF)
63What natural variation can teach us about resistance durability4.429Citations (PDF)
64Atypical Resistance Protein RPW8/HR Triggers Oligomerization of the NLR Immune Receptor RPP7 and Autoimmunity
Cell Host and Microbe, 2020, 27, 405-417.e6
12.280Citations (PDF)
65Tropical Trees as Time Capsules of Anthropogenic Activity
Trends in Plant Science, 2020, 25, 369-380
7.029Citations (PDF)
66Identifying genetic variants underlying phenotypic variation in plants without complete genomes
Nature Genetics, 2020, 52, 534-540
14.1186Citations (PDF)
67Review: CRISPR-finder: A high throughput and cost-effective method to identify successfully edited Arabidopsis thaliana individuals — R0/PR3
2020, ,
0Citations (PDF)
68Review: CRISPR-finder: A high throughput and cost-effective method to identify successfully edited Arabidopsis thaliana individuals — R0/PR2
2020, ,
0Citations (PDF)
69Review: CRISPR-finder: A high throughput and cost-effective method to identify successfully edited Arabidopsis thaliana individuals — R1/PR7
2020, ,
0Citations (PDF)
70Review: CRISPR-finder: A high throughput and cost-effective method to identify successfully edited Arabidopsis thaliana individuals — R1/PR8
2020, ,
0Citations (PDF)
71A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana
Cell, 2019, 178, 1260-1272.e14
23.4404Citations (PDF)
72RPW8/HR repeats control NLR activation in Arabidopsis thaliana
PLoS Genetics, 2019, 15, e1008313
2.277Citations (PDF)
73RST1 and RIPR connect the cytosolic RNA exosome to the Ski complex in Arabidopsis10.862Citations (PDF)
74Natural selection on the Arabidopsis thaliana genome in present and future climates
Nature, 2019, 573, 126-129
30.6252Citations (PDF)
75NCP activates chloroplast transcription by controlling phytochrome-dependent dual nuclear and plastidial switches10.862Citations (PDF)
76Phytochrome activates the plastid-encoded RNA polymerase for chloroplast biogenesis via nucleus-to-plastid signaling10.895Citations (PDF)
77Nonlinear phenotypic variation uncovers the emergence of heterosis in Arabidopsis thaliana
PLoS Biology, 2019, 17, e3000214
3.147Citations (PDF)
78All in the Family: The First Whole-Genome Survey of NLR Genes
Plant Cell, 2019, 31, 1212-1213
5.80Citations (PDF)
79Arabidopsis FLL2 promotes liquid–liquid phase separation of polyadenylation complexes
Nature, 2019, 569, 265-269
30.6302Citations (PDF)
80Multiple modes of convergent adaptation in the spread of glyphosate-resistant Amaranthus tuberculatus5.2136Citations (PDF)
81An Ultra High-Density Arabidopsis thaliana Crossover Map That Refines the Influences of Structural Variation and Epigenetic Features
Genetics, 2019, 213, 771-787
3.3163Citations (PDF)
82Comparing Arabidopsis receptor kinase and receptor protein‐mediated immune signaling reveals BIK1‐dependent differences
New Phytologist, 2019, 221, 2080-2095
5.3102Citations (PDF)
83EFFECTOR OF TRANSCRIPTION factors are novel plant‐specific regulators associated with genomic DNA methylation in Arabidopsis
New Phytologist, 2019, 221, 261-278
5.325Citations (PDF)
84Genome‐wide signatures of flowering adaptation to climate temperature: Regional analyses in a highly diverse native range of Arabidopsis thaliana
Plant, Cell and Environment, 2018, 41, 1806-1820
4.870Citations (PDF)
85High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell10.8277Citations (PDF)
86Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
Nature Genetics, 2018, 50, 285-296
14.1556Citations (PDF)
87Complex Relationships between Chromatin Accessibility, Sequence Divergence, and Gene Expression in Arabidopsis thaliana3.146Citations (PDF)
88The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog
Nucleic Acids Research, 2018, 46, D1150-D1156
10.7113Citations (PDF)
89Adaptive diversification of growth allometry in the plant Arabidopsis thaliana5.2103Citations (PDF)
90The MicroRNA miR773 Is Involved in the Arabidopsis Immune Response to Fungal Pathogens2.185Citations (PDF)
91Dose‐dependent interactions between two loci trigger altered shoot growth in BG‐5 × Krotzenburg‐0 (Kro‐0) hybrids of Arabidopsis thaliana
New Phytologist, 2018, 217, 392-406
5.313Citations (PDF)
92A Role for the F-Box Protein HAWAIIAN SKIRT in Plant microRNA Function
Plant Physiology, 2018, 176, 730-741
4.043Citations (PDF)
93Modulation of ACD6 dependent hyperimmunity by natural alleles of an Arabidopsis thaliana NLR resistance gene
PLoS Genetics, 2018, 14, e1007628
2.232Citations (PDF)
94Partial maintenance of organ-specific epigenetic marks during plant asexual reproduction leads to heritable phenotypic variation5.278Citations (PDF)
95Arabidopsis thaliana and Pseudomonas Pathogens Exhibit Stable Associations over Evolutionary Timescales
Cell Host and Microbe, 2018, 24, 168-179.e4
12.2206Citations (PDF)
96An efficient CRISPR vector toolbox for engineering large deletions in Arabidopsis thaliana
Plant Methods, 2018, 14,
2.984Citations (PDF)
97Image-based methods for phenotyping growth dynamics and fitness components in Arabidopsis thaliana
Plant Methods, 2018, 14,
2.972Citations (PDF)
98Transmission ratio distortion is frequent in Arabidopsis thaliana controlled crosses
Heredity, 2018, 122, 294-304
1.428Citations (PDF)
99Fine-Grained Analysis of Spontaneous Mutation Spectrum and Frequency in Arabidopsis thaliana
Genetics, 2018, 211, 703-714
3.3145Citations (PDF)
100The rate and potential relevance of new mutations in a colonizing plant lineage
PLoS Genetics, 2018, 14, e1007155
2.2140Citations (PDF)
101DNA sequence properties that predict susceptibility to epiallelic switching
EMBO Journal, 2017, 36, 617-628
5.169Citations (PDF)
102On the post-glacial spread of human commensal Arabidopsis thaliana10.8119Citations (PDF)
103Activation of a Plant NLR Complex through Heteromeric Association with an Autoimmune Risk Variant of Another NLR
Current Biology, 2017, 27, 1148-1160
2.591Citations (PDF)
104Arabidopsis proteins with a transposon-related domain act in gene silencing10.838Citations (PDF)
105A single haplotype hyposensitive to light and requiring strong vernalization dominates Arabidopsis thaliana populations in Patagonia, Argentina
Molecular Ecology, 2017, 26, 3389-3404
2.213Citations (PDF)
106The Arabidopsis miR396 mediates pathogen-associated molecular pattern-triggered immune responses against fungal pathogens2.7140Citations (PDF)
107Chlorosis caused by two recessively interacting genes reveals a role of RNA helicase in hybrid breakdown in Arabidopsis thaliana
Plant Journal, 2017, 91, 251-262
3.925Citations (PDF)
108Rapid generation of a transgene-free powdery mildew resistant tomato by genome deletion2.7708Citations (PDF)
109AraPheno: a public database for Arabidopsis thaliana phenotypes
Nucleic Acids Research, 2017, 45, D1054-D1059
10.7110Citations (PDF)
110Forever Young: The Role of Ubiquitin Receptor DA1 and E3 Ligase BIG BROTHER in Controlling Leaf Growth and Development
Plant Physiology, 2017, 173, 1269-1282
4.067Citations (PDF)
111easyGWAS: A Cloud-Based Platform for Comparing the Results of Genome-Wide Association Studies
Plant Cell, 2017, 29, 5-19
5.8122Citations (PDF)
112Prominent topologically associated domains differentiate global chromatin packing in rice from Arabidopsis
Nature Plants, 2017, 3, 742-748
8.0269Citations (PDF)
113SPF45-related splicing factor for phytochrome signaling promotes photomorphogenesis by regulating pre-mRNA splicing in Arabidopsis5.280Citations (PDF)
114High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development
Nature Genetics, 2017, 49, 1099-1106
14.1940Citations (PDF)
115Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana
New Phytologist, 2017, 213, 900-915
5.356Citations (PDF)
116Natural Variation of Molecular and Morphological Gibberellin Responses
Plant Physiology, 2017, 173, 703-714
4.022Citations (PDF)
117Altered chromatin compaction and histone methylation drive non-additive gene expression in an interspecific Arabidopsis hybrid
Genome Biology, 2017, 18,
4.8110Citations (PDF)
118Genomic basis and evolutionary potential for extreme drought adaptation in Arabidopsis thaliana7.6207Citations (PDF)
119The Genome of the Trinidadian Guppy, Poecilia reticulata, and Variation in the Guanapo Population
PLoS ONE, 2016, 11, e0169087
1.591Citations (PDF)
120Gene silencing pathways found in the green alga Volvox carteri reveal insights into evolution and origins of small RNA systems in plants
BMC Genomics, 2016, 17,
2.118Citations (PDF)
121Why I Love Genetics: Essay on Occasion of Being Awarded the GSA Medal 2016
Genetics, 2016, 204, 841-843
3.31Citations (PDF)
122Genome-wide analysis of chromatin packing in Arabidopsis thaliana at single-gene resolution
Genome Research, 2016, 26, 1057-1068
3.3225Citations (PDF)
123Allelochemicals of the phenoxazinone class act at physiologically relevant concentrations
Plant Signaling and Behavior, 2016, 11, e1176818
2.712Citations (PDF)
124Effector-Triggered Immune Response in Arabidopsis thaliana Is a Quantitative Trait
Genetics, 2016, 204, 337-353
3.349Citations (PDF)
125Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism
Nature Genetics, 2016, 48, 1077-1082
14.1233Citations (PDF)
126Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
Cell, 2016, 166, 492-505
23.4759Citations (PDF)
127Genetic architecture of nonadditive inheritance inArabidopsis thalianahybrids5.269Citations (PDF)
1281,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana
Cell, 2016, 166, 481-491
23.41,465Citations (PDF)
129Epigenome confrontation triggers immediate reprogramming of DNA methylation and transposon silencing inArabidopsis thalianaF1 epihybrids5.296Citations (PDF)
130A Proposal Regarding Best Practices for Validating the Identity of Genetic Stocks and the Effects of Genetic Variants
Plant Cell, 2016, 28, 606-609
5.839Citations (PDF)
131What causes mating system shifts in plants? Arabidopsis lyrata as a case study
Heredity, 2016, 118, 52-63
1.458Citations (PDF)
132Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation
PLoS Biology, 2016, 14, e1002352
3.11,453Citations (PDF)
133Cooperation and Conflict in the Plant Immune System
PLoS Pathogens, 2016, 12, e1005452
2.953Citations (PDF)
134Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation
Nature Plants, 2015, 1,
8.0178Citations (PDF)
135Adenylate cyclase 5is required for melanophore and male pattern development in the guppy (Poecilia reticulata)1.919Citations (PDF)
136Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism
Plant Journal, 2015, 83, 189-212
3.9218Citations (PDF)
137Modulation of Ambient Temperature-Dependent Flowering in Arabidopsis thaliana by Natural Variation of FLOWERING LOCUS M
PLoS Genetics, 2015, 11, e1005588
2.2122Citations (PDF)
138Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data
PLoS ONE, 2015, 10, e0137391
1.5105Citations (PDF)
139Plants Release Precursors of Histone Deacetylase Inhibitors to Suppress Growth of Competitors
Plant Cell, 2015, 27, 3175-3189
5.8115Citations (PDF)
140Rapid divergence and high diversity of miRNAs and miRNA targets in the Camelineae
Plant Journal, 2015, 81, 597-610
3.923Citations (PDF)
141Dissection of miRNA Pathways Using Arabidopsis Mesophyll Protoplasts
Molecular Plant, 2015, 8, 261-275
17.935Citations (PDF)
142Mutations in the EDR1 Gene Alter the Response of Arabidopsis thaliana to Phytophthora infestans and the Bacterial PAMPs flg22 and elf182.113Citations (PDF)
143Mutant Allele-Specific Uncoupling of PENETRATION3 Functions Reveals Engagement of the ATP-Binding Cassette Transporter in Distinct Tryptophan Metabolic Pathways
Plant Physiology, 2015, 168, 814-827
4.079Citations (PDF)
144Century-scale Methylome Stability in a Recently Diverged Arabidopsis thaliana Lineage
PLoS Genetics, 2015, 11, e1004920
2.2163Citations (PDF)
145Rapid and Inexpensive Whole-Genome Genotyping-by-Sequencing for Crossover Localization and Fine-Scale Genetic Mapping1.4150Citations (PDF)
146Plant Genetic Archaeology: Whole-Genome Sequencing Reveals the Pedigree of a Classical Trisomic Line1.43Citations (PDF)
147Beyond the thale: comparative genomics and genetics of Arabidopsis relatives
Nature Reviews Genetics, 2015, 16, 285-298
30.198Citations (PDF)
148Population Genomics for Understanding Adaptation in Wild Plant Species
Annual Review of Genetics, 2015, 49, 315-338
4.6117Citations (PDF)
149Salinity Is an Agent of Divergent Selection Driving Local Adaptation of Arabidopsis to Coastal Habitats
Plant Physiology, 2015, 168, 915-929
4.059Citations (PDF)
150Population genomics of natural and experimental populations of guppies (Poecilia reticulata)
Molecular Ecology, 2015, 24, 389-408
2.288Citations (PDF)
151Genome-wide analysis of local chromatin packing in Arabidopsis thaliana
Genome Research, 2015, 25, 246-256
3.3298Citations (PDF)
152Multiple Pigment Cell Types Contribute to the Black, Blue, and Orange Ornaments of Male Guppies (Poecilia reticulata)
PLoS ONE, 2014, 9, e85647
1.539Citations (PDF)
153Evolution of DNA Methylation Patterns in the Brassicaceae is Driven by Differences in Genome Organization
PLoS Genetics, 2014, 10, e1004785
2.2197Citations (PDF)
154DNA Topoisomerase 1α Promotes Transcriptional Silencing of Transposable Elements through DNA Methylation and Histone Lysine 9 Dimethylation in Arabidopsis
PLoS Genetics, 2014, 10, e1004446
2.231Citations (PDF)
155Analysis of a Plant Complex Resistance Gene Locus Underlying Immune-Related Hybrid Incompatibility and Its Occurrence in Nature
PLoS Genetics, 2014, 10, e1004848
2.267Citations (PDF)
156Activation of the Arabidopsis thaliana Immune System by Combinations of Common ACD6 Alleles
PLoS Genetics, 2014, 10, e1004459
2.266Citations (PDF)
157Mining Herbaria for Plant Pathogen Genomes: Back to the Future
PLoS Pathogens, 2014, 10, e1004028
2.983Citations (PDF)
158Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis
Nucleic Acids Research, 2014, 42, 9925-9936
10.792Citations (PDF)
159New Arabidopsis Advanced Intercross Recombinant Inbred Lines Reveal Female Control of Nonrandom Mating
Plant Physiology, 2014, 165, 175-185
4.024Citations (PDF)
160CHOLINE TRANSPORTER-LIKE1 is required for sieve plate development to mediate long-distance cell-to-cell communication10.880Citations (PDF)
161Different mechanisms for Arabidopsis thaliana hybrid necrosis cases inferred from temperature responses
Plant Biology, 2014, 16, 1033-1041
2.210Citations (PDF)
162Species-wide Genetic Incompatibility Analysis Identifies Immune Genes as Hot Spots of Deleterious Epistasis
Cell, 2014, 159, 1341-1351
23.4290Citations (PDF)
163Structural Features Determining Flower-Promoting Activity of Arabidopsis FLOWERING LOCUS T
Plant Cell, 2014, 26, 552-564
5.8255Citations (PDF)
164A Functional and Evolutionary Perspective on Transcription Factor Binding in Arabidopsis thaliana
Plant Cell, 2014, 26, 3894-3910
5.8123Citations (PDF)
165Trowel: a fast and accurate error correction module for Illumina sequencing reads
Bioinformatics, 2014, 30, 3264-3265
3.225Citations (PDF)
166The genome of the stress-tolerant wild tomato species Solanum pennellii
Nature Genetics, 2014, 46, 1034-1038
14.1485Citations (PDF)
167Mating system shifts and transposable element evolution in the plant genus Capsella
BMC Genomics, 2014, 15, 602
2.172Citations (PDF)
168Convergent Targeting of a Common Host Protein-Network by Pathogen Effectors from Three Kingdoms of Life
Cell Host and Microbe, 2014, 16, 364-375
12.2421Citations (PDF)
169Transcriptome assemblies for studying sex-biased gene expression in the guppy, Poecilia reticulata
BMC Genomics, 2014, 15,
2.189Citations (PDF)
170Circadian clock adjustment to plant iron status depends on chloroplast and phytochrome function
EMBO Journal, 2013, 32, 511-523
5.1107Citations (PDF)
171Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease
Nature Biotechnology, 2013, 31, 691-693
19.71,095Citations (PDF)
172Accurate indel prediction using paired-end short reads
BMC Genomics, 2013, 14, 132
2.131Citations (PDF)
173Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato5.2365Citations (PDF)
174Pigment Pattern Formation in the Guppy,Poecilia reticulata, Involves the Kita and Csf1ra Receptor Tyrosine Kinases
Genetics, 2013, 194, 631-646
3.363Citations (PDF)
175Kontrolle der Pflanzenentwicklung durch MikroRNAs
BioSpektrum, 2013, 19, 622-624
0.00Citations (PDF)
176Impaired sterol ester synthesis alters the response of Arabidopsis thaliana to Phytophthora infestans
Plant Journal, 2013, 73, 456-468
3.967Citations (PDF)
177The Capsella rubella genome and the genomic consequences of rapid mating system evolution
Nature Genetics, 2013, 45, 831-835
14.1451Citations (PDF)
178Coordination of Flower Maturation by a Regulatory Circuit of Three MicroRNAs
PLoS Genetics, 2013, 9, e1003374
2.2122Citations (PDF)
179Transposon Variants and Their Effects on Gene Expression in Arabidopsis
PLoS Genetics, 2013, 9, e1003255
2.2136Citations (PDF)
180LNK genes integrate light and clock signaling networks at the core of the Arabidopsis oscillator5.2183Citations (PDF)
181Tissue-Specific Silencing of ArabidopsisSU(VAR)3-9 HOMOLOG8by miR171a    
Plant Physiology, 2013, 161, 805-812
4.055Citations (PDF)
182User guide for mapping-by-sequencing in Arabidopsis
Genome Biology, 2013, 14,
4.8148Citations (PDF)
183Genome-Wide Identification of KANADI1 Target Genes
PLoS ONE, 2013, 8, e77341
1.568Citations (PDF)
184On epigenetics and epistasis: hybrids and their non‐additive interactions
EMBO Journal, 2012, 31, 249-250
5.19Citations (PDF)
185IndependentFLCMutations as Causes of Flowering-Time Variation inArabidopsis thalianaandCapsella rubella
Genetics, 2012, 192, 729-739
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188Fast-Forward Genetics Identifies Plant CPL Phosphatases as Regulators of miRNA Processing Factor HYL1
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190Epialleles in plant evolution
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191Natural Variation in Arabidopsis: From Molecular Genetics to Ecological Genomics    
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192High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
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193FITNESS OF ARABIDOPSIS THALIANA MUTATION ACCUMULATION LINES WHOSE SPONTANEOUS MUTATIONS ARE KNOWN1.349Citations (PDF)
194MIGS: miRNA‐induced gene silencing
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197Negative Regulation of Anthocyanin Biosynthesis in Arabidopsis by a miR156-Targeted SPL Transcription Factor  
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198Spontaneous epigenetic variation in the Arabidopsis thaliana methylome
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199MiRNA Control of Vegetative Phase Change in Trees
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200Whole-genome sequencing of multiple Arabidopsis thaliana populations
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201What Developmental Biologists Can Learn from Plant Pathogens
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202Fast-forward genetics enabled by new sequencing technologies
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204LOCAS – A Low Coverage Assembly Tool for Resequencing Projects
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205The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
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206A major QTL controls susceptibility to spinal curvature in the curveback guppy
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207Double-strand break repair processes drive evolution of the mitochondrial genome in Arabidopsis
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210Comparative analysis of non-autonomous effects of tasiRNAs and miRNAs in Arabidopsis thaliana
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214Evolution of theS-Locus Region in Arabidopsis Relatives    
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215Genome-Wide Comparison of Nucleotide-Binding Site-Leucine-Rich Repeat-Encoding Genes inArabidopsis     
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216Paired-end RAD-seq forde novoassembly and marker design without available reference
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217Complex Evolutionary Events at a Tandem Cluster of Arabidopsis thaliana Genes Resulting in a Single-Locus Genetic Incompatibility
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218The recombination landscape in Arabidopsis thaliana F2 populations
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221Control of lateral organ development and flowering time by the Arabidopsis thaliana MADS-box Gene AGAMOUS-LIKE6
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222Genome‐wide single nucleotide polymorphisms reveal population history and adaptive divergence in wild guppies
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226Probing the Reproducibility of Leaf Growth and Molecular Phenotypes: A Comparison of Three Arabidopsis Accessions Cultivated in Ten Laboratories  
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227The Role of the Arabidopsis Morning Loop Components CCA1, LHY, PRR7, and PRR9 in Temperature Compensation
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228STIMPY mediates cytokinin signaling during shoot meristem establishment in Arabidopsis seedlings
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230MicroRNA Gene Evolution in Arabidopsis lyrata and Arabidopsis thaliana    
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233Local-Scale Patterns of Genetic Variability, Outcrossing, and Spatial Structure in Natural Stands of Arabidopsis thaliana
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234The Scale of Population Structure in Arabidopsis thaliana
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235AGRONOMICS1: A New Resource for Arabidopsis Transcriptome Profiling    
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236Natural Diversity in Flowering Responses ofArabidopsis thalianaCaused by Variation in a Tandem Gene Array
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238Transmission Electron Microscopy (TEM) Freeze Substitution of Plant Tissues
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239Control of cell proliferation in Arabidopsis thaliana by microRNA miR396
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241Transcriptional Control of Gene Expression by MicroRNAs
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243Criteria for Annotation of Plant MicroRNAs
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246Dual roles of the bZIP transcription factor PERIANTHIA in the control of floral architecture and homeotic gene expression
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247The NGATHA Genes Direct Style Development in the Arabidopsis Gynoecium  
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248Linkage Analysis Reveals the Independent Origin of Poeciliid Sex Chromosomes and a Case of Atypical Sex Inheritance in the Guppy (Poecilia reticulata)
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252Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii
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258Quick Miniprep for Plant DNA Isolation
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259miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana
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262Genetic linkage map of the guppy,Poecilia reticulata, and quantitative trait loci analysis of male size and colour variation1.6113Citations (PDF)
263Recent speciation of Capsella rubella from Capsella grandiflora , associated with loss of self-incompatibility and an extreme bottleneck5.2226Citations (PDF)
264Dellaporta Miniprep for Plant DNA Isolation
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265QTL Mapping in New Arabidopsis thaliana Advanced Intercross-Recombinant Inbred Lines
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266Evolution of metal hyperaccumulation required cis-regulatory changes and triplication of HMA4
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267Next-generation genetics in plants
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268The impact of shared ancestral variation on hybrid male lethality – a 16 codon indel in the Drosophila simulans Lhr gene1.27Citations (PDF)
269Gene silencing in plants using artificial microRNAs and other small RNAs
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270Genetic Analysis of Arabidopsis Mutants
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271At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana
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272Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana5.2405Citations (PDF)
273Fixation, Embedding, and Sectioning of Plant Tissues
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274Immunohistochemistry on Sections of Plant Tissues Using Enzyme-Coupled Avidin-Biotin Complex
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277Control of Jasmonate Biosynthesis and Senescence by miR319 Targets
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281Dual Effects of miR156-Targeted SPL Genes and CYP78A5/KLUH on Plastochron Length and Organ Size in Arabidopsis thaliana    
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282Comparative Analysis of the MIR319a MicroRNA Locus in Arabidopsis and Related Brassicaceae3.171Citations (PDF)
283Specific Gene Silencing by Artificial MicroRNAs in Physcomitrella patens: An Alternative to Targeted Gene Knockouts    
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284Highly Specific Gene Silencing by Artificial miRNAs in Rice
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285Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana5.2161Citations (PDF)
286Autoimmune Response as a Mechanism for a Dobzhansky-Muller-Type Incompatibility Syndrome in Plants
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287Distinct Expression Patterns of Natural Antisense Transcripts in Arabidopsis
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288MSQT for choosing SNP assays from multiple DNA alignments
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289Combinations of WOX activities regulate tissue proliferation during Arabidopsis embryonic development
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290Antagonistic Regulation of PIN Phosphorylation by PP2A and PINOID Directs Auxin Flux
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293Move on up, it’s time for change—mobile signals controlling photoperiod-dependent flowering
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295Recombination and linkage disequilibrium in Arabidopsis thaliana
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298Detlef Weigel
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299Opsin gene duplication and diversification in the guppy, a model for sexual selection1.674Citations (PDF)
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301Highly Specific Gene Silencing by Artificial MicroRNAs in Arabidopsis
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302The PHYTOCHROME C photoreceptor gene mediates natural variation in flowering and growth responses of Arabidopsis thaliana
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303A divergent external loop confers antagonistic activity on floral regulators FT and TFL1
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304Evolutionary divergence of LFY function in the mustards Arabidopsis thaliana and Leavenworthia crassa
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306CrossLink: visualization and exploration of sequence relationships between (micro) RNAs
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307NUBBIN and JAGGED define stamen and carpel shape in Arabidopsis
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308Potent Induction of Arabidopsis thaliana Flowering by Elevated Growth Temperature
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309EMS Mutagenesis of Arabidopsis Seed
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310Setting Up Arabidopsis Crosses
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311Transformation of Agrobacterium Using Electroporation
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312Transformation of Agrobacterium Using the Freeze-Thaw Method
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313In Planta Transformation of Arabidopsis
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314Glufosinate Ammonium Selection of Transformed Arabidopsis
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315Root Transformation of Arabidopsis
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316Forward Genetics in Arabidopsis: Finding Mutations that Cause Particular Phenotypes
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317Screening DNA Pools for T-DNA Insertions in Arabidopsis Genes
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318Vectors and Agrobacterium Hosts for Arabidopsis Transformation
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319Kanamycin Selection of Transformed Arabidopsis
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321The 35S promoter used in a selectable marker gene of a plant transformation vector affects the expression of the transgene
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322Conservation and Divergence of FCA Function between Arabidopsis and Rice
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324FRIGIDA-Independent Variation in Flowering Time of Natural Arabidopsis thaliana Accessions
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325Comprehensive Interaction Map of the Arabidopsis MADS Box Transcription Factors
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327A genetic framework for fruit patterning in Arabidopsis thaliana
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330Title is missing!
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333Temporally and spatially controlled induction of gene expression inArabidopsis thaliana
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335Control of leaf morphogenesis by microRNAs
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338Large-Scale Identification of Single-Feature Polymorphisms in Complex Genomes
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339Modes of intercellular transcription factor movement in the Arabidopsis apex
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340The F-box-containing protein UFO and AGAMOUS participate in antagonistic pathways governing early petal development inArabidopsis5.280Citations (PDF)
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342Signaling in plants by intercellular RNA and protein movement
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343Ectopic Expression of SUPERMAN Suppresses Development of Petals and Stamens
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344Independent Control of Gibberellin Biosynthesis and Flowering Time by the Circadian Clock in Arabidopsis
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345Building Beauty
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347Quantitative Trait Loci Controlling Light and Hormone Response in Two Accessions ofArabidopsis thaliana
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348Interaction ofLEAFY,AGAMOUSandTERMINAL FLOWER1in maintaining floral meristem identity inArabidopsis
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349A Molecular Link between Stem Cell Regulation and Floral Patterning in Arabidopsis
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350GAMYB-like Genes, Flowering, and Gibberellin Signaling in Arabidopsis
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351Plant Development: From Cell Fate to Organ Formation
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352Functional divergence of the TFL1 -like gene family in Arabidopsis revealed by characterization of a novel homologue
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353Natural variation in light sensitivity of Arabidopsis
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354Arabidopsis genome: Life without Notch
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356NFL1, a Nicotiana tabacumLEAFY-Like Gene, Controls Meristem Initiation and Floral Structure
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362Activation Tagging in Arabidopsis
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363National Science Foundation-Sponsored Workshop Report: “The 2010 Project”Functional Genomics and the Virtual Plant. A Blueprint for Understanding How Plants Are Built and How to Improve Them
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365Regulation of Auxin Response by the Protein Kinase PINOID
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367The Arabidopsis flowering-time gene LUMINIDEPENDENS is expressed primarily in regions of cell proliferation and encodes a nuclear protein that regulates LEAFY expression
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368The Arabidopsis thaliana MERISTEM LAYER 1 promoter specifies epidermal expression in meristems and young primordia
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369Activation of a Floral Homeotic Gene in Arabidopsis
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373Plant development: The making of a leaf
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377Gibberellins Promote Flowering of Arabidopsis by Activating the LEAFY Promoter
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378Flowering-Time Genes Modulate the Response to LEAFY Activity
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380Flower development: Repressing reproduction
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382LEAFY expression and flower initiation in Arabidopsis
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383Sizing Up the Floral Meristem
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384Cell–cell interactions: Taking cues from the neighbors
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390Sp1/egr-like zinc-finger protein required for endoderm specification and germ-layer formation in Drosophila
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391Plant Development: The SECrets of Arabidopsis embryogenesis
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392The ABCs of floral homeotic genes
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404The Drosophila homology of the mouse mammary oncogene int-1 is identical to the segment polarity gene wingless
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414The eLife approach to peer review
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415A year in the life of eLife
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425Peer review without gatekeeping
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426The first year of a new era
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427Brazil nut trees
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428Natural variation modifies centromere-proximal meiotic crossover frequency and segregation distortion in Arabidopsis thaliana
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429Pseudomonas can make or break a happy phyllosphere microbiota
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437Biosynthetic gene clusters in Pseudomonas viridiflava have a fitness cost during Arabidopsis thaliana infection
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