| 1 | Microbiome confounders and quantitative profiling challenge
predicted microbial targets in colorectal cancer development | 25.6 | 21 | Citations (PDF) |
| 2 | Examining the healthy human microbiome concept | 27.5 | 8 | Citations (PDF) |
| 3 | Nifty new tools for microbiome treatment design | 14.7 | 8 | Citations (PDF) |
| 4 | Associations of HIV and iron status with gut microbiota composition, gut inflammation and gut integrity in South African school‐age children: a two‐way factorial case–control study | 2.7 | 9 | Citations (PDF) |
| 5 | The gut microbiota contributes to the pathogenesis of anorexia nervosa in humans and mice | 12.8 | 62 | Citations (PDF) |
| 6 | Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide | 14.1 | 12 | Citations (PDF) |
| 7 | <i>Dysosmobacter welbionis</i> is a newly isolated human commensal bacterium preventing diet-induced obesity and metabolic disorders in mice | 14.8 | 118 | Citations (PDF) |
| 8 | FLEXiGUT: Rationale for exposomics associations with chronic low-grade gut inflammation | 10.3 | 10 | Citations (PDF) |
| 9 | Specific contributions of segmental transit times to gut microbiota composition | 14.8 | 6 | Citations (PDF) |
| 10 | Impairment of gut microbial biotin metabolism and host biotin status in severe obesity: effect of biotin and prebiotic supplementation on improved metabolism | 14.8 | 70 | Citations (PDF) |
| 11 | Exploring the relationship between the gut microbiome and mental health outcomes in a posttraumatic stress disorder cohort relative to trauma-exposed controls | 0.9 | 44 | Citations (PDF) |
| 12 | OP03 Standardized faecal microbiota transplantation with microbiome-guided donor selection in active UC patients: A randomized, placebo-controlled intervention study | 1.3 | 4 | Citations (PDF) |
| 13 | The effect of oral iron supplementation on the gut microbiota, gut inflammation, and iron status in iron-depleted South African school-age children with virally suppressed HIV and without HIV | 3.6 | 4 | Citations (PDF) |
| 14 | P095 Anti-inflammatory effect of high acetate concentration on organoid-derived epithelial monolayer from patients with Ulcerative Colitis | 1.3 | 1 | Citations (PDF) |
| 15 | <i>Lactobacillus rhamnosus</i>
CNCM I-3690 decreases subjective academic stress in healthy adults: a randomized placebo-controlled trial | 10.3 | 18 | Citations (PDF) |
| 16 | Fecal Microbiota Transplantation (FMT) as an Adjunctive Therapy for Depression—Case Report | 2.7 | 78 | Citations (PDF) |
| 17 | The Effect of ß-Glucan Prebiotic on Kidney Function, Uremic Toxins and Gut Microbiome in Stage 3 to 5 Chronic Kidney Disease (CKD) Predialysis Participants: A Randomized Controlled Trial | 4.6 | 35 | Citations (PDF) |
| 18 | Microbiome and metabolome features of the cardiometabolic disease spectrum | 25.6 | 133 | Citations (PDF) |
| 19 | The virota and its transkingdom interactions in the healthy infant gut | 7.7 | 32 | Citations (PDF) |
| 20 | Sputum Bacterial Metacommunities in Distinguishing Heterogeneity in Respiratory Health and Disease | 3.9 | 1 | Citations (PDF) |
| 21 | Fast quantification of gut bacterial species in cocultures using flow cytometry and supervised classification | 5.6 | 6 | Citations (PDF) |
| 22 | Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean | 7.1 | 85 | Citations (PDF) |
| 23 | MO590: A Home-Based Exercise and Physical Activity Intervention After Kidney Transplantation: Impact of Exercise Intensity. The Phoenix-Kidney Study Protocol | 0.8 | 2 | Citations (PDF) |
| 24 | Effect of cryopreservation medium conditions on growth and isolation of gut anaerobes from human faecal samples | 11.5 | 13 | Citations (PDF) |
| 25 | Clinical, gut microbial and neural effects of a probiotic add-on therapy in depressed patients: a randomized controlled trial | 5.7 | 100 | Citations (PDF) |
| 26 | High Serum Vitamin D Concentrations, Induced via Diet, Trigger Immune and Intestinal Microbiota Alterations Leading to Type 1 Diabetes Protection in NOD Mice | 5.0 | 8 | Citations (PDF) |
| 27 | Microbiota, not host origin drives
<i>ex vivo</i>
intestinal epithelial responses | 10.3 | 15 | Citations (PDF) |
| 28 | Single-cell approaches in human microbiome researchCell, 2022, 185, 2725-2738 | 35.1 | 56 | Citations (PDF) |
| 29 | Bidirectional Interactions between Arboviruses and the Bacterial and Viral Microbiota in Aedes aegypti and Culex quinquefasciatus | 4.5 | 15 | Citations (PDF) |
| 30 | Long-term life history predicts current gut microbiome in a population-based cohort study | 8.5 | 16 | Citations (PDF) |
| 31 | Gut microbiome studies in CKD: opportunities, pitfalls and therapeutic potential | 13.6 | 35 | Citations (PDF) |
| 32 | Fecal Microbiota Transplantation Reduces Symptoms in Some Patients With Irritable Bowel Syndrome With Predominant Abdominal Bloating: Short- and Long-term Results From a Placebo-Controlled Randomized Trial | 1.0 | 132 | Citations (PDF) |
| 33 | Interactions between soil compositions and the wheat root microbiome under drought stress: From an in silico to in planta perspective | 4.2 | 13 | Citations (PDF) |
| 34 | Local immune response to food antigens drives meal-induced abdominal pain | 40.1 | 187 | Citations (PDF) |
| 35 | Large-scale association analyses identify host factors influencing human gut microbiome composition | 16.3 | 950 | Citations (PDF) |
| 36 | Short chain fatty acids and its producing organisms: An overlooked therapy for IBD? | 10.0 | 399 | Citations (PDF) |
| 37 | Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities | 4.5 | 121 | Citations (PDF) |
| 38 | P676 The small intestinal microbiome in Crohn’s disease is characterised by increased luminal diversity and stable mucosa-associated communities | 1.3 | 0 | Citations (PDF) |
| 39 | Human and preclinical studies of the host–gut microbiome co-metabolite hippurate as a marker and mediator of metabolic health | 14.8 | 74 | Citations (PDF) |
| 40 | P082 Assessment of anti-inflammatory effect of high acetate administration in UC patient-derived epithelial monolayer cultures | 1.3 | 0 | Citations (PDF) |
| 41 | Novel insights into the genetically obese (ob/ob) and diabetic (db/db) mice: two sides of the same coin | 11.5 | 138 | Citations (PDF) |
| 42 | Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases | 14.1 | 36 | Citations (PDF) |
| 43 | Wheat bran with reduced particle size increases serum SCFAs in obese subjects without improving health parameters compared with a maltodextrin placebo | 5.1 | 6 | Citations (PDF) |
| 44 | Nutrient load acts as a driver of gut microbiota load, community composition and metabolic functionality in the simulator of the human intestinal microbial ecosystem | 3.0 | 6 | Citations (PDF) |
| 45 | Monocyte-driven atypical cytokine storm and aberrant neutrophil activation as key mediators of COVID-19 disease severity | 14.1 | 171 | Citations (PDF) |
| 46 | Unstable regulatory T cells, enriched for naïve and Nrp1<sup>neg</sup>cells, are purged after fate challenge | 14.0 | 17 | Citations (PDF) |
| 47 | Null-model-based network comparison reveals core associations | 5.6 | 21 | Citations (PDF) |
| 48 | Macroscale patterns of oceanic zooplankton composition and size structure | 3.7 | 29 | Citations (PDF) |
| 49 | Effect of obesity on gastrointestinal transit, pressure and pH using a wireless motility capsule | 4.2 | 21 | Citations (PDF) |
| 50 | Treponema peruense sp. nov., a commensal spirochaete isolated from human faeces | 1.7 | 6 | Citations (PDF) |
| 51 | Clinical practices underlie COVID-19 patient respiratory microbiome composition and its interactions with the host | 14.1 | 58 | Citations (PDF) |
| 52 | Gut Microbiome Profiling Uncovers a Lower Abundance of Butyricicoccus in Advanced Stages of Chronic Kidney Disease | 2.7 | 15 | Citations (PDF) |
| 53 | Disentangling environmental effects in microbial association networks | 11.5 | 20 | Citations (PDF) |
| 54 | Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean | 12.8 | 64 | Citations (PDF) |
| 55 | Temporal variability in quantitative human gut microbiome profiles and implications for clinical research | 14.1 | 113 | Citations (PDF) |
| 56 | Reporting guidelines for human microbiome research: the STORMS checklist | 25.6 | 225 | Citations (PDF) |
| 57 | Combinatorial, additive and dose-dependent drug–microbiome associations | 40.1 | 124 | Citations (PDF) |
| 58 | Successional Stages in Infant Gut Microbiota Maturation | 4.5 | 65 | Citations (PDF) |
| 59 | Variation and transmission of the human gut microbiota across multiple familial generations | 12.8 | 43 | Citations (PDF) |
| 60 | GWAS of stool frequency provides insights into gastrointestinal motility and irritable bowel syndrome | 7.1 | 17 | Citations (PDF) |
| 61 | Duodenal Dysbiosis and Relation to the Efficacy of Proton Pump Inhibitors in Functional Dyspepsia | 4.5 | 26 | Citations (PDF) |
| 62 | Red Wine Consumption Associated With Increased Gut Microbiota α-Diversity in 3 Independent Cohorts | 1.0 | 61 | Citations (PDF) |
| 63 | Microglia Require CD4 T Cells to Complete the Fetal-to-Adult TransitionCell, 2020, 182, 625-640.e24 | 35.1 | 214 | Citations (PDF) |
| 64 | Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology | 14.1 | 134 | Citations (PDF) |
| 65 | Increased IL‐10‐producing regulatory T cells are characteristic of severe cases of COVID‐19 | 3.7 | 64 | Citations (PDF) |
| 66 | Depression and suicidality: A link to premature T helper cell aging and increased Th17 cells | 4.3 | 69 | Citations (PDF) |
| 67 | In vitro ecology: a discovery engine for microbiome therapies | 14.7 | 8 | Citations (PDF) |
| 68 | Dietary Emulsifiers Alter Composition and Activity of the Human Gut Microbiota in vitro, Irrespective of Chemical or Natural Emulsifier Origin | 3.9 | 39 | Citations (PDF) |
| 69 | Statin therapy is associated with lower prevalence of gut microbiota dysbiosis | 40.1 | 300 | Citations (PDF) |
| 70 | Genome-wide associations of human gut microbiome variation and implications for causal inference analyses | 12.8 | 139 | Citations (PDF) |
| 71 | Gut microbiome variation is associated to Multiple Sclerosis phenotypic subtypes | 3.8 | 69 | Citations (PDF) |
| 72 | OP20 The gut microbiota during biological therapy for inflammatory bowel disease | 1.3 | 0 | Citations (PDF) |
| 73 | Tapping into the maize root microbiome to identify bacteria that promote growth under chilling conditions | 11.5 | 79 | Citations (PDF) |
| 74 | Zinc inhibits lethal inflammatory shock by preventing microbe‐induced interferon signature in intestinal epithelium | 7.2 | 16 | Citations (PDF) |
| 75 | Design of synthetic microbial consortia for gut microbiota modulation | 4.1 | 42 | Citations (PDF) |
| 76 | Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study | 25.6 | 1,457 | Citations (PDF) |
| 77 | Microbial communities of the house fly Musca domestica vary with geographical location and habitat | 11.5 | 78 | Citations (PDF) |
| 78 | Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean MetatranscriptomeCell, 2019, 179, 1068-1083.e21 | 35.1 | 236 | Citations (PDF) |
| 79 | Global Trends in Marine Plankton Diversity across Kingdoms of LifeCell, 2019, 179, 1084-1097.e21 | 35.1 | 269 | Citations (PDF) |
| 80 | Expanding the scope and scale of microbiome research | 8.4 | 1 | Citations (PDF) |
| 81 | Tracking humans and microbes | 40.1 | 13 | Citations (PDF) |
| 82 | Synthetic ecology of the human gut microbiota | 27.5 | 116 | Citations (PDF) |
| 83 | Metabolic Functions of Gut Microbes Associate With Efficacy of Tumor Necrosis Factor Antagonists in Patients With Inflammatory Bowel Diseases | 1.0 | 184 | Citations (PDF) |
| 84 | Quantitative microbiome profiling disentangles inflammation- and bile duct obstruction-associated microbiota alterations across PSC/IBD diagnoses | 12.8 | 156 | Citations (PDF) |
| 85 | Early-Career Scientists Shaping the World | 4.6 | 0 | Citations (PDF) |
| 86 | Marine DNA Viral Macro- and Microdiversity from Pole to PoleCell, 2019, 177, 1109-1123.e14 | 35.1 | 487 | Citations (PDF) |
| 87 | Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems | 5.4 | 67 | Citations (PDF) |
| 88 | The human microbiome in health and disease: hype or hope | 1.5 | 38 | Citations (PDF) |
| 89 | P836 The predictive role of gut microbiota in treatment response to vedolizumab and ustekinumab in inflammatory bowel disease | 1.3 | 1 | Citations (PDF) |
| 90 | The neuroactive potential of the human gut microbiota in quality of life and depression | 12.8 | 1,253 | Citations (PDF) |
| 91 | Population-level analysis of <i>Blastocystis</i> subtype prevalence and variation in the human gut microbiota | 14.8 | 154 | Citations (PDF) |
| 92 | Gut microbiota dynamics and uraemic toxins: one size does not fit allGut, 2019, 68, 2257.1-2260 | 14.8 | 38 | Citations (PDF) |
| 93 | Practical guidelines for gut microbiome analysis in microbiota-gut-brain axis research | 0.9 | 3 | Citations (PDF) |
| 94 | The Human Gut Microbiome: From Association to ModulationCell, 2018, 172, 1198-1215 | 35.1 | 572 | Citations (PDF) |
| 95 | Richness and ecosystem development across faecal snapshots of the gut microbiota | 12.8 | 83 | Citations (PDF) |
| 96 | A global ocean atlas of eukaryotic genes | 14.1 | 234 | Citations (PDF) |
| 97 | Low eukaryotic viral richness is associated with faecal microbiota transplantation success in patients with UC | 14.8 | 45 | Citations (PDF) |
| 98 | The Gut Microbiome and Mental Health: Implications for Anxiety- and Trauma-Related Disorders | 1.9 | 116 | Citations (PDF) |
| 99 | Impact of red and processed meat and fibre intake on treatment outcomes among patients with chronic inflammatory diseases: protocol for a prospective cohort study of prognostic factors and personalised medicine | 2.0 | 19 | Citations (PDF) |
| 100 | Butyrate Producers as Potential Next-Generation Probiotics: Safety Assessment of the Administration of
<i>Butyricicoccus pullicaecorum</i>
to Healthy Volunteers | 4.6 | 97 | Citations (PDF) |
| 101 | A low-gluten diet induces changes in the intestinal microbiome of healthy Danish adults | 14.1 | 129 | Citations (PDF) |
| 102 | Linking gut microbiota, metabolic syndrome and economic status based on a population-level analysis | 11.5 | 134 | Citations (PDF) |
| 103 | Comparisons of gut microbiota profiles in wild-type and gelatinase B/matrix metalloproteinase-9-deficient mice in acute DSS-induced colitis | 8.4 | 8 | Citations (PDF) |
| 104 | Prebiotic Wheat Bran Fractions Induce Specific Microbiota Changes | 3.9 | 37 | Citations (PDF) |
| 105 | Meta-analysis of human genome-microbiome association studies: the MiBioGen consortium initiative | 11.5 | 119 | Citations (PDF) |
| 106 | Editorial overview: It's the ecology, stupid: microbiome research in the post-stamp collecting age | 7.7 | 2 | Citations (PDF) |
| 107 | Regional variation limits applications of healthy gut microbiome reference ranges and disease models | 25.6 | 598 | Citations (PDF) |
| 108 | Introducing insoluble wheat bran as a gut microbiota niche in an <i>in vitro</i> dynamic gut model stimulates propionate and butyrate production and induces colon region specific shifts in the luminal and mucosal microbial community | 3.8 | 32 | Citations (PDF) |
| 109 | Go with the flow or solitary confinement: a look inside the single-cell toolbox for isolation of rare and uncultured microbes | 7.7 | 35 | Citations (PDF) |
| 110 | Author response: Integrated culturing, modeling and transcriptomics uncovers complex interactions and emergent behavior in a three-species synthetic gut community 2018, , | | 3 | Citations (PDF) |
| 111 | Prebiotic inulin-type fructans induce specific changes in the human gut microbiota | 14.8 | 386 | Citations (PDF) |
| 112 | Assessment of faecal microbial transfer in irritable bowel syndrome with severe bloating | 14.8 | 56 | Citations (PDF) |
| 113 | Multi-stability and the origin of microbial community types | 9.1 | 83 | Citations (PDF) |
| 114 | Therapeutic Manipulation of the Gut Microbiota Through Diet to Reduce Intestinal Inflammation: Results from the FIT Trial | 1.0 | 5 | Citations (PDF) |
| 115 | The resilience of the intestinal microbiota influences health and disease | 27.5 | 727 | Citations (PDF) |
| 116 | Combined use of network inference tools identifies ecologically meaningful bacterial associations in a paddy soil | 10.3 | 63 | Citations (PDF) |
| 117 | Crowdsourcing Earth's microbes | 40.1 | 2 | Citations (PDF) |
| 118 | Matrix Metalloproteinase/MMP-9 Gene Knockout does not Influence Changes in Gut Microbiota in a Model of Acute Dextran Sodium Sulphate/DSS-Induced Colitis | 1.0 | 1 | Citations (PDF) |
| 119 | Profiling of the Fecal Microbiota and Metabolome in Patients with Inflammatory Bowel Disease and their Unaffected Relatives | 1.0 | 0 | Citations (PDF) |
| 120 | P774 Metagenomics and metabolomics of patients with inflammatory bowel disease and their unaffected relatives | 1.3 | 1 | Citations (PDF) |
| 121 | Water activity does not shape the microbiota in the human colon | 14.8 | 8 | Citations (PDF) |
| 122 | Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition | 6.4 | 117 | Citations (PDF) |
| 123 | Nlrp6- and ASC-Dependent Inflammasomes Do Not Shape the Commensal Gut Microbiota Composition | 22.7 | 143 | Citations (PDF) |
| 124 | Quantitative microbiome profiling links gut community variation to microbial load | 40.1 | 723 | Citations (PDF) |
| 125 | Brief Report: <i>Dialister</i> as a Microbial Marker of Disease Activity in Spondyloarthritis | 6.2 | 235 | Citations (PDF) |
| 126 | Fire modifies the phylogenetic structure of soil bacterial co‐occurrence networks | 3.8 | 51 | Citations (PDF) |
| 127 | P767 The FIT trial: anti-inflammatory dietary intervention effects on the intestinal microbiota | 1.3 | 1 | Citations (PDF) |
| 128 | Reconciliation between operational taxonomic units and species boundaries | 3.0 | 54 | Citations (PDF) |
| 129 | P078 Gut microbiome profiling of MMP-9 deficient mice and their wild-type littermates in a model of acute DSS-induced colitis | 1.3 | 1 | Citations (PDF) |
| 130 | From reads to operational taxonomic units: an ensemble processing pipeline for MiSeq amplicon sequencing data | 3.4 | 47 | Citations (PDF) |
| 131 | Practical considerations for large-scale gut microbiome studies | 11.0 | 146 | Citations (PDF) |
| 132 | A Proposal for a Study on Treatment Selection and Lifestyle Recommendations in Chronic Inflammatory Diseases: A Danish Multidisciplinary Collaboration on Prognostic Factors and Personalised Medicine | 4.6 | 26 | Citations (PDF) |
| 133 | P776 Dysbiosis in Nlrp6/Asc-deficient mice does not result from inflammasome deficiency | 1.3 | 0 | Citations (PDF) |
| 134 | Enterotypes in the landscape of gut microbial community composition | 12.8 | 699 | Citations (PDF) |
| 135 | The Probiotic Butyricicoccus pullicaecorum Reduces Feed Conversion and Protects from Potentially Harmful Intestinal Microorganisms and Necrotic Enteritis in Broilers | 3.9 | 101 | Citations (PDF) |
| 136 | Faecal Metaproteomic Analysis Reveals a Personalized and Stable Functional Microbiome and Limited Effects of a Probiotic Intervention in Adults | 2.5 | 62 | Citations (PDF) |
| 137 | The Genomic Sequence of the Oral Pathobiont Strain NI1060 Reveals Unique Strategies for Bacterial Competition and Pathogenicity | 2.5 | 7 | Citations (PDF) |
| 138 | Species‐sorting and mass‐transfer paradigms control managed natural metacommunities | 3.8 | 25 | Citations (PDF) |
| 139 | Primary sclerosing cholangitis is characterised by intestinal dysbiosis independent from IBD | 14.8 | 323 | Citations (PDF) |
| 140 | Tu1713 Host-Microbiome Interactions in Primary Sclerosing Cholangitis | 1.0 | 0 | Citations (PDF) |
| 141 | Su1909 Genetic Risk for Crohn's Disease has Little Impact on Intestinal Microbiota Composition | 1.0 | 0 | Citations (PDF) |
| 142 | Population-level analysis of gut microbiome variation | 38.2 | 1,635 | Citations (PDF) |
| 143 | Heritable components of the human fecal microbiome are associated with visceral fat | 8.4 | 186 | Citations (PDF) |
| 144 | Human gut microbes impact host serum metabolome and insulin sensitivity | 40.1 | 1,500 | Citations (PDF) |
| 145 | Species–function relationships shape ecological properties of the human gut microbiome | 12.8 | 277 | Citations (PDF) |
| 146 | Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton | 14.1 | 59 | Citations (PDF) |
| 147 | Rules of the game for microbiota | 40.1 | 16 | Citations (PDF) |
| 148 | IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data | 3.3 | 26 | Citations (PDF) |
| 149 | Microbiome-based companion diagnostics: no longer science fiction? | 14.8 | 18 | Citations (PDF) |
| 150 | Computational approaches to predict bacteriophage–host relationships | 11.0 | 310 | Citations (PDF) |
| 151 | A web application for sample size and power calculation in case-control microbiome studies | 5.0 | 54 | Citations (PDF) |
| 152 | Correlation detection strategies in microbial data sets vary widely in sensitivity and precision | 9.1 | 525 | Citations (PDF) |
| 153 | Plankton networks driving carbon export in the oligotrophic ocean | 40.1 | 554 | Citations (PDF) |
| 154 | Meta-omics in Inflammatory Bowel Disease Research: Applications, Challenges, and Guidelines | 1.3 | 35 | Citations (PDF) |
| 155 | Donor Species Richness Determines Faecal Microbiota Transplantation Success in Inflammatory Bowel Disease | 1.3 | 253 | Citations (PDF) |
| 156 | Heterogeneity of the gut microbiome in mice: guidelines for optimizing experimental design | 11.0 | 274 | Citations (PDF) |
| 157 | Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates | 14.8 | 714 | Citations (PDF) |
| 158 | CoNet app: inference of biological association networks using Cytoscape | 0.6 | 361 | Citations (PDF) |
| 159 | CoNet app: inference of biological association networks using Cytoscape | 0.6 | 278 | Citations (PDF) |
| 160 | Towards microbial fermentation metabolites as markers for health benefits of prebiotics | 5.6 | 271 | Citations (PDF) |
| 161 | Open science resources for the discovery and analysis of Tara Oceans data | 6.4 | 283 | Citations (PDF) |
| 162 | Cross-biome comparison of microbial association networks | 3.9 | 138 | Citations (PDF) |
| 163 | Soil microbiome responses to the short‐term effects of Amazonian deforestation | 3.9 | 137 | Citations (PDF) |
| 164 | Determinants of community structure in the global plankton interactome | 38.2 | 698 | Citations (PDF) |
| 165 | Structure and function of the global ocean microbiome | 38.2 | 1,854 | Citations (PDF) |
| 166 | Metagenomics meets time series analysis: unraveling microbial community dynamics | 7.7 | 296 | Citations (PDF) |
| 167 | Eukaryotic plankton diversity in the sunlit ocean | 38.2 | 1,361 | Citations (PDF) |
| 168 | Interindividual differences in response to treatment with butyrate-producing Butyricicoccus pullicaecorum 25–3T studied in an in vitro gut model | 3.0 | 52 | Citations (PDF) |
| 169 | Intestinal Microbiota And Diet in IBS: Causes, Consequences, or Epiphenomena? | 0.4 | 277 | Citations (PDF) |
| 170 | Commensal microbiota influence systemic autoimmune responses | 7.4 | 94 | Citations (PDF) |
| 171 | How informative is the mouse for human gut microbiota research? | 2.7 | 934 | Citations (PDF) |
| 172 | Addition of acacia gum to a FOS/inulin blend improves its fermentation profile in the Simulator of the Human Intestinal Microbial Ecosystem (SHIME®) | 3.6 | 19 | Citations (PDF) |
| 173 | NoDe: a fast error-correction algorithm for pyrosequencing amplicon reads | 3.3 | 12 | Citations (PDF) |
| 174 | Microbiology Meets Big Data: The Case of Gut Microbiota–Derived Trimethylamine | 9.6 | 143 | Citations (PDF) |
| 175 | Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota | 40.1 | 1,597 | Citations (PDF) |
| 176 | CATCh, an Ensemble Classifier for Chimera Detection in 16S rRNA Sequencing Studies | 3.6 | 46 | Citations (PDF) |
| 177 | Towards biome-specific analysis of meta-omics data | 9.1 | 73 | Citations (PDF) |
| 178 | The skin microbiome of caspase‐14‐deficient mice shows mild dysbiosis | 2.8 | 15 | Citations (PDF) |
| 179 | Metagenomic <scp>16S rDNA I</scp>llumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities | 3.8 | 247 | Citations (PDF) |
| 180 | Analysis of the draft genome of Pseudomonas fluorescens ATCC17400 indicates a capacity to take up iron from a wide range of sources, including different exogenous pyoverdines | 3.3 | 13 | Citations (PDF) |
| 181 | Relationship between genome and epigenome - challenges and requirements for future research | 3.2 | 23 | Citations (PDF) |
| 182 | A20 controls intestinal homeostasis through cell-specific activities | 14.1 | 105 | Citations (PDF) |
| 183 | The gut microbiome - a new target for understanding, diagnosing and treating disease | 2.8 | 2 | Citations (PDF) |
| 184 | Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes | 18.1 | 804 | Citations (PDF) |
| 185 | Inflammation-associated enterotypes, host genotype, cage and inter-individual effects drive gut microbiota variation in common laboratory mice | 8.4 | 352 | Citations (PDF) |
| 186 | A combinatorial approach to the structure elucidation of a pyoverdine siderophore produced by a Pseudomonas putida isolate and the use of pyoverdine as a taxonomic marker for typing P. putida subspecies | 3.3 | 19 | Citations (PDF) |
| 187 | Richness of human gut microbiome correlates with metabolic markers | 40.1 | 3,472 | Citations (PDF) |
| 188 | A metagenomic insight into our gut's microbiome | 14.8 | 291 | Citations (PDF) |
| 189 | Translating the human microbiome | 18.1 | 28 | Citations (PDF) |
| 190 | Induction of Bone Loss by Pathobiont-Mediated Nod1 Signaling in the Oral Cavity | 15.2 | 106 | Citations (PDF) |
| 191 | Gut Microbiota Affects Sensitivity to Acute DSS-induced Colitis Independently of Host Genotype | 2.4 | 58 | Citations (PDF) |
| 192 | Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes | 9.1 | 165 | Citations (PDF) |
| 193 | Microbial Co-occurrence Relationships in the Human Microbiome | 3.3 | 1,143 | Citations (PDF) |
| 194 | <i>In silico</i>analyses of pericycle cell populations reinforce their relation with associated vasculature in<i>Arabidopsis</i> | 4.1 | 22 | Citations (PDF) |
| 195 | Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts | 4.6 | 107 | Citations (PDF) |
| 196 | Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours | 7.3 | 29 | Citations (PDF) |
| 197 | The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates | 9.1 | 539 | Citations (PDF) |
| 198 | A metagenome-wide association study of gut microbiota in type 2 diabetes | 40.1 | 5,059 | Citations (PDF) |
| 199 | A comparative analysis of the intestinal metagenomes present in guinea pigs (Cavia porcellus) and humans (Homo sapiens) | 3.2 | 48 | Citations (PDF) |
| 200 | Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease | 2.5 | 335 | Citations (PDF) |
| 201 | Microbial interactions: from networks to models | 27.5 | 2,644 | Citations (PDF) |
| 202 | The chemical interactome space between the human host and the genetically defined gut metabotypes | 9.1 | 18 | Citations (PDF) |
| 203 | Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data | 2.5 | 211 | Citations (PDF) |
| 204 | A Holistic Approach to Marine Eco-Systems Biology | 5.2 | 288 | Citations (PDF) |
| 205 | Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications | 18.1 | 552 | Citations (PDF) |
| 206 | Enterotypes of the human gut microbiome | 40.1 | 5,523 | Citations (PDF) |
| 207 | Caspase deficiency alters the murine gut microbiome | 8.5 | 63 | Citations (PDF) |
| 208 | Universally Distributed Single-Copy Genes Indicate a Constant Rate of Horizontal Transfer | 2.5 | 71 | Citations (PDF) |
| 209 | Meeting Report: The Terabase Metagenomics Workshop and the Vision of an Earth Microbiome Project | 5.0 | 200 | Citations (PDF) |
| 210 | A human gut microbial gene catalogue established by metagenomic sequencing | 40.1 | 8,731 | Citations (PDF) |
| 211 | SmashCommunity: a metagenomic annotation and analysis tool | 5.0 | 83 | Citations (PDF) |
| 212 | SmashCell: a software framework for the analysis of single-cell amplified genome sequences | 5.0 | 22 | Citations (PDF) |
| 213 | Discovering Functional Novelty in Metagenomes: Examples from Light-Mediated Processes | 3.0 | 47 | Citations (PDF) |
| 214 | Quantifying environmental adaptation of metabolic pathways in metagenomics | 7.7 | 164 | Citations (PDF) |
| 215 | Molecular eco-systems biology: towards an understanding of community function | 27.5 | 313 | Citations (PDF) |
| 216 | Millimeter‐scale genetic gradients and community‐level molecular convergence in a hypersaline microbial mat | 7.3 | 123 | Citations (PDF) |
| 217 | A Nitrile Hydratase in the Eukaryote Monosiga brevicollis | 2.5 | 24 | Citations (PDF) |
| 218 | A Molecular Study of Microbe Transfer between Distant Environments | 2.5 | 17 | Citations (PDF) |
| 219 | Quantitative assessment of protein function prediction from metagenomics shotgun sequences | 7.7 | 68 | Citations (PDF) |
| 220 | Get the most out of your metagenome: computational analysis of environmental sequence data | 7.7 | 143 | Citations (PDF) |
| 221 | Title is missing! | 14.0 | 226 | Citations (PDF) |
| 222 | Protein function space: viewing the limits or limited by our view? | 7.1 | 30 | Citations (PDF) |
| 223 | Quantitative Phylogenetic Assessment of Microbial Communities in Diverse Environments | 38.2 | 271 | Citations (PDF) |
| 224 | Title is missing! | 14.0 | 151 | Citations (PDF) |
| 225 | Nonsense-mediated mRNA decay: target genes and functional diversification of effectors | 8.1 | 112 | Citations (PDF) |
| 226 | An Improved Statistical Method for Detecting Heterotachy in Nucleotide Sequences | 4.7 | 21 | Citations (PDF) |
| 227 | The TORNADO1 and TORNADO2 Genes Function in Several Patterning Processes during Early Leaf Development in Arabidopsis thaliana | 7.6 | 89 | Citations (PDF) |
| 228 | Functional divergence of proteins through frameshift mutations | 13.0 | 56 | Citations (PDF) |
| 229 | Modeling gene and genome duplications in eukaryotes | 7.7 | 737 | Citations (PDF) |
| 230 | Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets | 3.9 | 214 | Citations (PDF) |
| 231 | Small-Scale Gene Duplications 2005, , 289-327 | | 11 | Citations (PDF) |
| 232 | Deletions Involving Long-Range Conserved Nongenic Sequences Upstream and Downstream of FOXL2 as a Novel Disease-Causing Mechanism in Blepharophimosis Syndrome | 6.8 | 101 | Citations (PDF) |
| 233 | GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts | 16.2 | 13 | Citations (PDF) |
| 234 | Duplication and Divergence: The Evolution of New Genes and Old Ideas | 7.7 | 677 | Citations (PDF) |
| 235 | Molecular characterization of Arabidopsis PHO80-like proteins, a novel class of CDKA;1-interacting cyclins | 5.6 | 44 | Citations (PDF) |
| 236 | Title is missing! | 0.0 | 53 | Citations (PDF) |
| 237 | Genomewide Structural Annotation and Evolutionary Analysis of the Type I MADS-Box Genes in Plants | 1.7 | 106 | Citations (PDF) |
| 238 | And then there were many: MADS goes genomic | 15.4 | 176 | Citations (PDF) |
| 239 | Genome-Wide Characterization of the Lignification Toolbox in Arabidopsis
| 5.4 | 640 | Citations (PDF) |
| 240 | Investigating ancient duplication events in the Arabidopsis genome 2003, , 117-129 | | 27 | Citations (PDF) |
| 241 | Genome-Wide Analysis of Core Cell Cycle Genes in Arabidopsis | 7.6 | 481 | Citations (PDF) |
| 242 | The Automatic Detection of Homologous Regions (ADHoRe) and Its Application to Microcolinearity Between Arabidopsis and Rice | 4.6 | 120 | Citations (PDF) |
| 243 | Transcriptome analysis during cell division in plants | 7.7 | 122 | Citations (PDF) |
| 244 | An implementation approach for local area networks | 0.9 | 0 | Citations (PDF) |
| 245 | Integrated culturing, modeling and transcriptomics uncovers complex interactions and emergent behavior in a three-species synthetic gut community | 1.6 | 58 | Citations (PDF) |
| 246 | Isolation of wheat bran-colonizing and metabolizing species from the human fecal microbiota | 0.0 | 10 | Citations (PDF) |
