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30 peer-reviewed articles • 16,140 peer-reviewed citations • Sorted by year • Download PDF (PDF by citations)
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1Towards complete and error-free genome assemblies of all vertebrate species
Nature, 2021, 592, 737-746
30.73,064Citations (PDF)
2Genome biology of the paleotetraploid perennial biomass crop Miscanthus
Nature Communications, 2020, 11,
10.8114Citations (PDF)
3Deeply conserved synteny resolves early events in vertebrate evolution
Nature Ecology and Evolution, 2020, 4, 820-830
7.6406Citations (PDF)
4Structural Variation Detection by Proximity Ligation from Formalin-Fixed, Paraffin-Embedded Tumor Tissue
Journal of Molecular Diagnostics, 2019, 21, 375-383
1.917Citations (PDF)
5Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle
Genome Biology and Evolution, 2016, 8, 2387-2405
1.726Citations (PDF)
6Chromosome-scale shotgun assembly using an in vitro method for long-range linkage
Genome Research, 2016, 26, 342-350
3.3826Citations (PDF)
7Genome evolution in the allotetraploid frog Xenopus laevis
Nature, 2016, 538, 336-343
30.71,036Citations (PDF)
8Low coverage sequencing of three echinoderm genomes: the brittle star Ophionereis fasciata, the sea star Patiriella regularis, and the sea cucumber Australostichopus mollis
GigaScience, 2016, 5,
2.533Citations (PDF)
9Timing and Scope of Genomic Expansion within Annelida: Evidence from Homeoboxes in the Genome of the Earthworm Eisenia fetida
Genome Biology and Evolution, 2016, 8, 271-281
1.753Citations (PDF)
10Evolution of the Perlecan/HSPG2 Gene and Its Activation in Regenerating Nematostella vectensis
PLoS ONE, 2015, 10, e0124578
1.528Citations (PDF)
11Hemichordate genomes and deuterostome origins
Nature, 2015, 527, 459-465
30.7276Citations (PDF)
12The Transcriptome of an Amphioxus, Asymmetron lucayanum, from the Bahamas: A Window into Chordate Evolution
Genome Biology and Evolution, 2014, 6, 2681-2696
1.778Citations (PDF)
13Evolutionary profiling reveals the heterogeneous origins of classes of human disease genes: implications for modeling disease genetics in animals
BMC Evolutionary Biology, 2014, 14,
3.145Citations (PDF)
14Joint assembly and genetic mapping of the Atlantic horseshoe crab genome reveals ancient whole genome duplication
GigaScience, 2014, 3,
2.5104Citations (PDF)
15The Genome of the Ctenophore Mnemiopsis leidyi and Its Implications for Cell Type Evolution
Science, 2013, 342,
26.1668Citations (PDF)
16Phytozome: a comparative platform for green plant genomics
Nucleic Acids Research, 2012, 40, D1178-D1186
10.75,554Citations (PDF)
17Insights into bilaterian evolution from three spiralian genomes
Nature, 2012, 493, 526-531
30.7640Citations (PDF)
18Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum
Genome Biology, 2011, 12,
4.8159Citations (PDF)
19The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications
Journal of Biomedical Semantics, 2011, 2, 4
1.220Citations (PDF)
20The dynamic genome of Hydra
Nature, 2010, 464, 592-596
30.7810Citations (PDF)
21The Amphimedon queenslandica genome and the evolution of animal complexity
Nature, 2010, 466, 720-726
30.71,011Citations (PDF)
22Domain shuffling and the evolution of vertebrates
Genome Research, 2009, 19, 1393-1403
3.392Citations (PDF)
23The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans
Nature, 2008, 451, 783-788
30.71,104Citations (PDF)
24The amphioxus genome and the evolution of the chordate karyotype
Nature, 2008, 453, 1064-1071
30.71,604Citations (PDF)
25The Trichoplax genome and the nature of placozoans
Nature, 2008, 454, 955-960
30.7875Citations (PDF)
26Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)
Nature Biotechnology, 2008, 26, 553-560
19.71,190Citations (PDF)
27The amphioxus genome illuminates vertebrate origins and cephalochordate biology
Genome Research, 2008, 18, 1100-1111
3.3479Citations (PDF)
28The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation
Proceedings of the National Academy of Sciences of the United States of America, 2007, 104, 7705-7710
5.2617Citations (PDF)
29A physical map of the highly heterozygous Populus genome: integration with the genome sequence and genetic map and analysis of haplotype variation
Plant Journal, 2007, 50, 1063-1078
3.970Citations (PDF)
30Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
Nature Biotechnology, 2006, 24, 1263-1269
19.7697Citations (PDF)