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22 peer-reviewed articles • 17,857 peer-reviewed citations • Sorted by year • Download PDF (PDF by citations)
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1CapTrap-seq: a platform-agnostic and quantitative approach for high-fidelity full-length RNA sequencing
Nature Communications, 2024, 15, 1-13
11.022Citations (PDF)
2GENCODE 2021
Nucleic Acids Research, 2021, 49, D916-D923
11.21,386Citations (PDF)
3Perspectives on ENCODE
Nature, 2020, 583, 693-698
31.8220Citations (PDF)
4GENCODE reference annotation for the human and mouse genomes
Nucleic Acids Research, 2019, 47, D766-D773
11.23,253Citations (PDF)
5Towards a complete map of the human long non-coding RNA transcriptome
Nature Reviews Genetics, 2018, 19, 535-548
29.7595Citations (PDF)
6High-throughput annotation of full-length long noncoding RNAs with capture long-read sequencing
Nature Genetics, 2017, 49, 1731-1740
14.2277Citations (PDF)
7Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq)
Nature Communications, 2016, 7, 1-11
11.081Citations (PDF)
8Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression
Nature Communications, 2015, 6, 1-11
11.084Citations (PDF)
9A comparative encyclopedia of DNA elements in the mouse genome
Nature, 2014, 515, 355-364
31.81,784Citations (PDF)
10Comparative analysis of the transcriptome across distant species
Nature, 2014, 512, 445-448
31.8312Citations (PDF)
11An encyclopedia of mouse DNA elements (Mouse ENCODE)
Genome Biology, 2012, 13, 1-5
4.8441Citations (PDF)
12The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
Genome Research, 2012, 22, 1775-1789
3.25,032Citations (PDF)
13Landscape of transcription in human cells
Nature, 2012, 489, 101-108
31.85,123Citations (PDF)
14Evidence for Transcript Networks Composed of Chimeric RNAs in Human Cells
PLoS ONE, 2012, 7, e28213
1.565Citations (PDF)
15Efficient targeted transcript discovery via array-based normalization of RACE libraries
Nature Methods, 2008, 5, 629-635
14.141Citations (PDF)
16Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions
Genome Research, 2007, 17, 746-759
3.2178Citations (PDF)
17Structured RNAs in the ENCODE selected regions of the human genome
Genome Research, 2007, 17, 852-864
3.2159Citations (PDF)
18The implications of alternative splicing in the ENCODE protein complement
Proceedings of the National Academy of Sciences of the United States of America, 2007, 104, 5495-5500
5.3216Citations (PDF)
19Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Nature, 2007, 447, 799-816
31.84,936Citations (PDF)
20GENCODE: producing a reference annotation for ENCODE
Genome Biology, 2006, 7, 1-9
4.8588Citations (PDF)
21EGASP: the human ENCODE Genome Annotation Assessment Project
Genome Biology, 2006, 7, 1-31
4.8241Citations (PDF)
22ArrayProspector: a web resource of functional associations inferred from microarray expression data.
Nucleic Acids Research, 2004, 32, W445-8
11.229Citations (PDF)