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41 peer-reviewed articles • 4,504 peer-reviewed citations • Sorted by year • Download PDF (PDF by citations)
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1The global H5N1 influenza panzootic in mammals
Nature, 2024, 637, 304-313
30.6451Citations (PDF)
2On the importance of assessing topological convergence in Bayesian phylogenetic inference
Virus Evolution, 2024, 10,
2.27Citations (PDF)
3Fitting stochastic epidemic models to gene genealogies using linear noise approximation
Annals of Applied Statistics, 2023, 17,
0.82Citations (PDF)
4Phylogeographic analysis of dengue virus serotype 1 and cosmopolitan serotype 2 in Africa
International Journal of Infectious Diseases, 2023, 133, 46-52
1.411Citations (PDF)
5Accumulated metagenomic studies reveal recent migration, whole genome evolution, and undiscovered diversity of orthomyxoviruses
Journal of Virology, 2023, 97,
2.48Citations (PDF)
6Antibody escape and global spread of SARS-CoV-2 lineage A.27
Nature Communications, 2022, 13,
10.832Citations (PDF)
7Lower respiratory tract infections in children requiring mechanical ventilation: a multicentre prospective surveillance study incorporating airway metagenomics
Lancet Microbe, The, 2022, 3, e284-e293
8.061Citations (PDF)
8Predicting the evolution of the Lassa virus endemic area and population at risk over the next decades
Nature Communications, 2022, 13,
10.893Citations (PDF)
9Global disparities in SARS-CoV-2 genomic surveillance
Nature Communications, 2022, 13,
10.8279Citations (PDF)
10Polymorphism of genetic ambigrams
Virus Evolution, 2021, 7,
2.29Citations (PDF)
11Variant Analysis of SARS-CoV-2 Genomes from Belgian Military Personnel Engaged in Overseas Missions and Operations
Viruses, 2021, 13, 1359
2.27Citations (PDF)
12Global genome analysis reveals a vast and dynamic anellovirus landscape within the human virome
Cell Host and Microbe, 2021, 29, 1305-1315.e6
12.2107Citations (PDF)
13Emergence of an early SARS-CoV-2 epidemic in the United States
Cell, 2021, 184, 4939-4952.e15
23.453Citations (PDF)
14Conserved ancestral tropical niche but different continental histories explain the latitudinal diversity gradient in brush-footed butterflies
Nature Communications, 2021, 12,
10.885Citations (PDF)
15Emergence and spread of SARS-CoV-2 lineage B.1.620 with variant of concern-like mutations and deletions
Nature Communications, 2021, 12,
10.871Citations (PDF)
16Bayesian inference of reassortment networks reveals fitness benefits of reassortment in human influenza viruses
Proceedings of the National Academy of Sciences of the United States of America, 2020, 117, 17104-17111
5.263Citations (PDF)
17Estimating effective population size changes from preferentially sampled genetic sequences
PLoS Computational Biology, 2020, 16, e1007774
1.924Citations (PDF)
18Inferring time-dependent migration and coalescence patterns from genetic sequence and predictor data in structured populations
Virus Evolution, 2019, 5,
2.238Citations (PDF)
19The ability of single genes vs full genomes to resolve time and space in outbreak analysis
BMC Evolutionary Biology, 2019, 19,
3.155Citations (PDF)
20MERS coronaviruses from camels in Africa exhibit region-dependent genetic diversity
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115, 3144-3149
5.2184Citations (PDF)
21Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak
Nature Communications, 2018, 9,
10.871Citations (PDF)
22Virus genomes reveal factors that spread and sustained the Ebola epidemic
Nature, 2017, 544, 309-315
30.6429Citations (PDF)
23Genomic epidemiology reveals multiple introductions of Zika virus into the United States
Nature, 2017, 546, 401-405
30.6345Citations (PDF)
24Genome-wide evolutionary dynamics of influenza B viruses on a global scale
PLoS Pathogens, 2017, 13, e1006749
2.9109Citations (PDF)
25The evolution of Ebola virus: Insights from the 2013–2016 epidemic
Nature, 2016, 538, 193-200
30.6313Citations (PDF)
26Preliminary Evaluation of the Effect of Investigational Ebola Virus Disease Treatments on Viral Genome Sequences
Journal of Infectious Diseases, 2016, 214, S333-S341
2.212Citations (PDF)
27Rapid outbreak sequencing of Ebola virus in Sierra Leone identifies transmission chains linked to sporadic cases
Virus Evolution, 2016, 2, vew016
2.2124Citations (PDF)
28MERS-CoV recombination: implications about the reservoir and potential for adaptation
Virus Evolution, 2016, 2, vev023
2.271Citations (PDF)
29Real-time, portable genome sequencing for Ebola surveillance
Nature, 2016, 530, 228-232
30.61,472Citations (PDF)
30Reassortment between Influenza B Lineages and the Emergence of a Coadapted PB1–PB2–HA Gene Complex
Molecular Biology and Evolution, 2015, 32, 162-172
3.182Citations (PDF)
31Evolution and Spread of Ebola Virus in Liberia, 2014–2015
Cell Host and Microbe, 2015, 18, 659-669
12.289Citations (PDF)
32Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone
Cell, 2015, 161, 1516-1526
23.4305Citations (PDF)
33Temporal and spatial analysis of the 2014–2015 Ebola virus outbreak in West Africa
Nature, 2015, 524, 97-101
30.6304Citations (PDF)
34The genetics of host–virus coevolution in invertebrates
Current Opinion in Virology, 2014, 8, 73-78
3.242Citations (PDF)
35Integrating influenza antigenic dynamics with molecular evolution
ELife, 0, 3,
1.0424Citations (PDF)
36Are arthropods at the heart of virus evolution?
ELife, 0, 4,
1.034Citations (PDF)
37MERS-CoV spillover at the camel-human interface
ELife, 0, 7,
1.0229Citations (PDF)
38Single mosquito metatranscriptomics identifies vectors, emerging pathogens and reservoirs in one assay
ELife, 0, 10,
1.0131Citations (PDF)
39Phylogenetic Analysis of Guinea 2014 EBOV Ebolavirus Outbreak
PLOS Currents, 0, ,
1.665Citations (PDF)
40The global antigenic diversity of swine influenza A viruses
ELife, 0, 5,
1.0198Citations (PDF)
41HIPSTR: highest independent posterior subtree reconstruction in TreeAnnotator X
Bioinformatics, 0, 41,
3.220Citations (PDF)