| 1 | Overexpression screen of chromosome 21 genes reveals modulators of Sonic hedgehog signaling relevant to Down syndrome | 1.2 | 15 | Citations (PDF) |
| 2 | The Interaction of Borrelia burgdorferi with Human Dendritic Cells: Functional Implications | 0.8 | 7 | Citations (PDF) |
| 3 | Comprehensive and scalable quantification of splicing differences with MntJULiP | 4.8 | 9 | Citations (PDF) |
| 4 | Impact of lifestyle and demographics on the gut microbiota of acne patients and the response to minocycline | 1.9 | 4 | Citations (PDF) |
| 5 | Comparison of the skin microbiota in acne and rosacea | 1.8 | 37 | Citations (PDF) |
| 6 | Study of Tofacitinib in Refractory Dermatomyositis: An Open‐Label Pilot Study of Ten Patients | 4.5 | 151 | Citations (PDF) |
| 7 | Excessive
O
-GlcNAcylation Causes Heart Failure and Sudden Death | 13.1 | 141 | Citations (PDF) |
| 8 | Jutils: a visualization toolkit for differential alternative splicing events | 3.2 | 9 | Citations (PDF) |
| 9 | CaMKII oxidation is a critical performance/disease trade-off acquired at the dawn of vertebrate evolution | 10.8 | 34 | Citations (PDF) |
| 10 | Detection of Alu Exonization Events in Human Frontal Cortex From RNA-Seq Data | 2.4 | 12 | Citations (PDF) |
| 11 | Somatic reversion impacts myelodysplastic syndromes and acute myeloid leukemia evolution in the short telomere disorders | 6.6 | 75 | Citations (PDF) |
| 12 | Characterization of a Mouse Model of Inducible Frailty: The Humanized IL-6 Mouse | 0.1 | 1 | Citations (PDF) |
| 13 | Chromatin structure regulates cancer-specific alternative splicing events in primary HPV-related oropharyngeal squamous cell carcinoma | 2.1 | 30 | Citations (PDF) |
| 14 | Variability in skin microbiota between smokers, former smokers, and nonsmokers | 1.5 | 11 | Citations (PDF) |
| 15 | Changes in Gut Microbiome after Bariatric Surgery Versus Medical Weight Loss in a Pilot Randomized Trial | 1.5 | 66 | Citations (PDF) |
| 16 | ZCCHC8, the nuclear exosome targeting component, is mutated in familial pulmonary fibrosis and is required for telomerase RNA maturation | 2.8 | 123 | Citations (PDF) |
| 17 | A Prospective Study of the Urinary and Gastrointestinal Microbiome in Prepubertal Males | 1.1 | 35 | Citations (PDF) |
| 18 | A multi-sample approach increases the accuracy of transcript assembly | 10.8 | 55 | Citations (PDF) |
| 19 | Characterization and Analysis of the Skin Microbiota in Rosacea: A Case–Control Study | 5.7 | 64 | Citations (PDF) |
| 20 | Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer | 3.2 | 12 | Citations (PDF) |
| 21 | Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma | 2.9 | 20 | Citations (PDF) |
| 22 | Germline Mutations in DNA Repair Genes in Lung Adenocarcinoma | 1.5 | 97 | Citations (PDF) |
| 23 | Molecular Triage of Premalignant Lesions in Liquid-Based Cervical Cytology and Circulating Cell-Free DNA from Urine, Using a Panel of Methylated Human Papilloma Virus and Host Genes | 1.2 | 40 | Citations (PDF) |
| 24 | Rascaf: Improving Genome Assembly with RNA Sequencing Data | 2.8 | 62 | Citations (PDF) |
| 25 | CLASS2: accurate and efficient splice variant annotation from RNA-seq reads | 10.7 | 85 | Citations (PDF) |
| 26 | Viral non-coding RNA inhibits HNF4α expression in HCV associated hepatocellular carcinoma | 1.7 | 5 | Citations (PDF) |
| 27 | Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads | 2.5 | 566 | Citations (PDF) |
| 28 | Loss of nuclear PTEN in HCV-infected human hepatocytes | 1.7 | 13 | Citations (PDF) |
| 29 | RNA sequencing of cancer reveals novel splicing alterations | 2.7 | 172 | Citations (PDF) |
| 30 | Genome-Guided Transcriptome Assembly in the Age of Next-Generation Sequencing | 2.6 | 18 | Citations (PDF) |
| 31 | Thousands of exon skipping events differentiate among splicing patterns in sixteen human tissues | 0.3 | 477 | Citations (PDF) |
| 32 | Thousands of exon skipping events differentiate among splicing patterns in sixteen human tissues | 0.3 | 322 | Citations (PDF) |
| 33 | Transcriptomic landscape of breast cancers through mRNA sequencing | 2.7 | 94 | Citations (PDF) |
| 34 | Genome Assembly Has a Major Impact on Gene Content: A Comparison of Annotation in Two Bos Taurus Assemblies | 1.5 | 73 | Citations (PDF) |
| 35 | MicroRNA silencing of tumor suppressor DLC-1 promotes efficient hepatitis C virus replication in primary human hepatocytes | 9.6 | 78 | Citations (PDF) |
| 36 | Sim4db and Leaff: utilities for fast batch spliced alignment and sequence indexing | 3.2 | 19 | Citations (PDF) |
| 37 | Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis | 3.1 | 374 | Citations (PDF) |
| 38 | Spaced Seeds for Cross-species CDNA-to-genome Sequence Alignment | 0.4 | 1 | Citations (PDF) |
| 39 | Genes and genomes, an imperfect world: comparison of gene annotations of two Bos taurus draft assemblies | 12.2 | 0 | Citations (PDF) |
| 40 | Sim4cc: a cross-species spliced alignment program | 10.7 | 16 | Citations (PDF) |
| 41 | Novel Splice Variants of sFlt1 are Upregulated in Preeclampsia | 0.7 | 86 | Citations (PDF) |
| 42 | A method for identifying alternative or cryptic donor splice sites within gene and mRNA sequences. Comparisons among sequences from vertebrates, echinoderms and other groups | 2.1 | 6 | Citations (PDF) |
| 43 | A whole-genome assembly of the domestic cow, Bos taurus | 12.2 | 1,063 | Citations (PDF) |
| 44 | Universal seeds for cDNA-to-genome comparison | 2.5 | 11 | Citations (PDF) |
| 45 | Effective cluster-based seed design for cross-species sequence comparisons | 3.2 | 3 | Citations (PDF) |
| 46 | Improving gene annotation using peptide mass spectrometry | 3.3 | 160 | Citations (PDF) |
| 47 | Designing Sensitive and Specific Spaced Seeds for Cross-Species mRNA-to-Genome Alignment | 0.7 | 7 | Citations (PDF) |
| 48 | Bioinformatics of alternative splicing and its regulation | 4.0 | 32 | Citations (PDF) |
| 49 | Finding Anchors for Genomic Sequence Comparison | 0.7 | 7 | Citations (PDF) |
| 50 | Gene and alternative splicing annotation with AIR | 3.3 | 74 | Citations (PDF) |
| 51 | List of lists-annotated (LOLA): A database for annotation and comparison of published microarray gene lists | 1.6 | 54 | Citations (PDF) |
| 52 | Whole-genome shotgun assembly and comparison of human genome assemblies | 5.2 | 169 | Citations (PDF) |
| 53 | Comparative immunopeptidomics of humans and their pathogens | 5.2 | 48 | Citations (PDF) |
| 54 | Comparison of genome degradation in Paratyphi A and Typhi, human-restricted serovars of Salmonella enterica that cause typhoid | 14.1 | 396 | Citations (PDF) |
| 55 | EnteriX 2003: visualization tools for genome alignments of Enterobacteriaceae | 10.7 | 23 | Citations (PDF) |
| 56 | A non-redundant microarray of genes for two related bacteria | 10.7 | 74 | Citations (PDF) |
| 57 | PipTools: A Computational Toolkit to Annotate and Analyze Pairwise Comparisons of Genomic Sequences | 2.0 | 32 | Citations (PDF) |
| 58 | The Sequence of the Human Genome | 26.1 | 13,190 | Citations (PDF) |
| 59 | Complete genome sequence of Salmonella enterica serovar Typhimurium LT2 | 30.7 | 1,802 | Citations (PDF) |
| 60 | Comparison of the Escherichia coli K-12 genome with sampled genomes of a Klebsiella pneumoniae and three Salmonella enterica serovars, Typhimurium, Typhi and Paratyphi | 10.7 | 102 | Citations (PDF) |
| 61 | Web-based visualization tools for bacterial genome alignments | 10.7 | 29 | Citations (PDF) |
| 62 | Comparison of five methods for finding conserved sequences in multiple alignments of gene regulatory regions | 10.7 | 103 | Citations (PDF) |
| 63 | A Computer Program for Aligning a cDNA Sequence with a Genomic DNA Sequence | 3.3 | 685 | Citations (PDF) |
| 64 | A non-mosaic transchromosomic mouse model of Down syndrome carrying the long arm of human chromosome 21 | 1.0 | 117 | Citations (PDF) |
| 65 | MntJULiP and Jutils: differential splicing analysis of RNA-seq data with covariates | 1.3 | 1 | Citations (PDF) |
